RNA–Protein interactions for RNA: ENST00000505065.1

CDC42SE2-208, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE2, Length 4,352 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-208ENST00000505065 TAGLN3Q9UI15 199 aa7.63□□□□□ -1.19
CDC42SE2-208ENST00000505065 CORO2BQ9UQ03 480 aa7.63□□□□□ -1.19
CDC42SE2-208ENST00000505065 A0A1B0GVC2 190 aa7.63□□□□□ -1.19
CDC42SE2-208ENST00000505065 AKAP10O43572 662 aa7.63□□□□□ -1.19
CDC42SE2-208ENST00000505065 KCNK2O95069 426 aa7.63□□□□□ -1.19
CDC42SE2-208ENST00000505065 EPPINO95925 133 aa7.63□□□□□ -1.19
CDC42SE2-208ENST00000505065 ABCD3P28288 659 aa7.63□□□□□ -1.19
CDC42SE2-208ENST00000505065 OTX2P32243 289 aa7.63□□□□□ -1.19
CDC42SE2-208ENST00000505065 ARL1P40616 181 aaPredicted RBP7.63□□□□□ -1.19
CDC42SE2-208ENST00000505065 TNFSF10P50591 281 aa7.63□□□□□ -1.19
CDC42SE2-208ENST00000505065 PRR5P85299 388 aa7.63□□□□□ -1.19
CDC42SE2-208ENST00000505065 ID2Q02363 134 aa7.63□□□□□ -1.19
CDC42SE2-208ENST00000505065 SELPLGQ14242 412 aa7.63□□□□□ -1.19
CDC42SE2-208ENST00000505065 EXOSC7Q15024 291 aaKnown RBP7.63□□□□□ -1.19
CDC42SE2-208ENST00000505065 COX20Q5RI15 118 aa7.63□□□□□ -1.19
CDC42SE2-208ENST00000505065 TYW3Q6IPR3 259 aaKnown RBP7.63□□□□□ -1.19
CDC42SE2-208ENST00000505065 HSDL2Q6YN16 418 aa7.63□□□□□ -1.19
CDC42SE2-208ENST00000505065 FRRS1Q6ZNA5 592 aa7.63□□□□□ -1.19
CDC42SE2-208ENST00000505065 NUP54Q7Z3B4 507 aa7.63□□□□□ -1.19
CDC42SE2-208ENST00000505065 BCORP1Q8N888 145 aa7.63□□□□□ -1.19
CDC42SE2-208ENST00000505065 OR4A15Q8NGL6 344 aa7.63□□□□□ -1.19
CDC42SE2-208ENST00000505065 RBM18Q96H35 190 aaKnown RBP7.63□□□□□ -1.19
CDC42SE2-208ENST00000505065 ZNF583Q96ND8 569 aa7.63□□□□□ -1.19
CDC42SE2-208ENST00000505065 NXF5Q9H1B4 397 aaKnown RBP7.63□□□□□ -1.19
CDC42SE2-208ENST00000505065 TRBV11-1A0A0K0K1C0 115 aa7.62□□□□□ -1.19
CDC42SE2-208ENST00000505065 UNC5CO95185 931 aa7.62□□□□□ -1.19
CDC42SE2-208ENST00000505065 MANFP55145 182 aaKnown RBP7.62□□□□□ -1.19
CDC42SE2-208ENST00000505065 KCNK10P57789 538 aa7.62□□□□□ -1.19
CDC42SE2-208ENST00000505065 RBBP4Q09028 425 aa7.62□□□□□ -1.19
CDC42SE2-208ENST00000505065 KCNAB2Q13303 367 aa7.62□□□□□ -1.19
CDC42SE2-208ENST00000505065 ACER2Q5QJU3 275 aa7.62□□□□□ -1.19
CDC42SE2-208ENST00000505065 ZNF468Q5VIY5 522 aaPredicted RBP7.62□□□□□ -1.19
CDC42SE2-208ENST00000505065 RNF220Q5VTB9 566 aa7.62□□□□□ -1.19
CDC42SE2-208ENST00000505065 LRRC69Q6ZNQ3 347 aa7.62□□□□□ -1.19
CDC42SE2-208ENST00000505065 LRRC74BQ6ZQY2 392 aa7.62□□□□□ -1.19
CDC42SE2-208ENST00000505065 SLC30A8Q8IWU4 369 aa7.62□□□□□ -1.19
CDC42SE2-208ENST00000505065 HORMAD2Q8N7B1 307 aa7.62□□□□□ -1.19
CDC42SE2-208ENST00000505065 TOR1AIP2Q8NFQ8 470 aa7.62□□□□□ -1.19
CDC42SE2-208ENST00000505065 GFM2Q969S9 779 aaKnown RBP7.62□□□□□ -1.19
CDC42SE2-208ENST00000505065 ZBTB18Q99592 522 aa7.62□□□□□ -1.19
CDC42SE2-208ENST00000505065 RUBCNLQ9H714 662 aa7.62□□□□□ -1.19
CDC42SE2-208ENST00000505065 C3orf14Q9HBI5 128 aa7.62□□□□□ -1.19
CDC42SE2-208ENST00000505065 CMTM6Q9NX76 183 aa7.62□□□□□ -1.19
CDC42SE2-208ENST00000505065 KCNE3Q9Y6H6 103 aa7.62□□□□□ -1.19
CDC42SE2-208ENST00000505065 K7EM74 188 aa7.62□□□□□ -1.19
CDC42SE2-208ENST00000505065 MASP2O00187 686 aa7.62□□□□□ -1.19
CDC42SE2-208ENST00000505065 ABCB7O75027 752 aa7.62□□□□□ -1.19
CDC42SE2-208ENST00000505065 HMGN2P05204 90 aaKnown RBP7.62□□□□□ -1.19
CDC42SE2-208ENST00000505065 PCGF2P35227 344 aa7.62□□□□□ -1.19
CDC42SE2-208ENST00000505065 CD97P48960 835 aa7.62□□□□□ -1.19
CDC42SE2-208ENST00000505065 STX1BP61266 288 aa7.62□□□□□ -1.19
CDC42SE2-208ENST00000505065 CYLC2Q14093 348 aaPredicted RBP7.62□□□□□ -1.19
CDC42SE2-208ENST00000505065 VEZF1Q14119 521 aa7.62□□□□□ -1.19
CDC42SE2-208ENST00000505065 MAPKAPK3Q16644 382 aa7.62□□□□□ -1.19
CDC42SE2-208ENST00000505065 MINDY4Q4G0A6 757 aa7.62□□□□□ -1.19
CDC42SE2-208ENST00000505065 TIGD2Q4W5G0 525 aa7.62□□□□□ -1.19
CDC42SE2-208ENST00000505065 ISLR2Q6UXK2 745 aa7.62□□□□□ -1.19
CDC42SE2-208ENST00000505065 KAT2AQ92830 837 aa7.62□□□□□ -1.19
CDC42SE2-208ENST00000505065 CMTM5Q96DZ9 223 aa7.62□□□□□ -1.19
CDC42SE2-208ENST00000505065 ARSGQ96EG1 525 aa7.62□□□□□ -1.19
CDC42SE2-208ENST00000505065 CRELD1Q96HD1 420 aa7.62□□□□□ -1.19
CDC42SE2-208ENST00000505065 SLC35A5Q9BS91 424 aa7.62□□□□□ -1.19
CDC42SE2-208ENST00000505065 SLC38A1Q9H2H9 487 aa7.62□□□□□ -1.19
CDC42SE2-208ENST00000505065 PNO1Q9NRX1 252 aaKnown RBP7.62□□□□□ -1.19
CDC42SE2-208ENST00000505065 CCDC167Q9P0B6 97 aa7.62□□□□□ -1.19
CDC42SE2-208ENST00000505065 HRH3Q9Y5N1 445 aa7.62□□□□□ -1.19
CDC42SE2-208ENST00000505065 GPC6Q9Y625 555 aaPredicted RBP7.62□□□□□ -1.19
CDC42SE2-208ENST00000505065 CAPN7Q9Y6W3 813 aa7.62□□□□□ -1.19
CDC42SE2-208ENST00000505065 KCNH1O95259 989 aa7.62□□□□□ -1.19
CDC42SE2-208ENST00000505065 MRPS22P82650 360 aaKnown RBP7.62□□□□□ -1.19
CDC42SE2-208ENST00000505065 MRPS35P82673 323 aaKnown RBP7.62□□□□□ -1.19
CDC42SE2-208ENST00000505065 STX5Q13190 355 aa7.62□□□□□ -1.19
CDC42SE2-208ENST00000505065 NHSL2Q5HYW2 709 aa7.62□□□□□ -1.19
CDC42SE2-208ENST00000505065 IRAK1BP1Q5VVH5 260 aa7.62□□□□□ -1.19
CDC42SE2-208ENST00000505065 NANOGP8Q6NSW7 305 aa7.62□□□□□ -1.19
CDC42SE2-208ENST00000505065 FAM180BQ6P0A1 224 aa7.62□□□□□ -1.19
CDC42SE2-208ENST00000505065 BHLHB9Q6PI77 547 aa7.62□□□□□ -1.19
CDC42SE2-208ENST00000505065 TRPM8Q7Z2W7 1104 aa7.62□□□□□ -1.19
CDC42SE2-208ENST00000505065 CPLX4Q7Z7G2 160 aa7.62□□□□□ -1.19
CDC42SE2-208ENST00000505065 CHERPQ8IWX8 916 aaKnown RBP7.62□□□□□ -1.19
CDC42SE2-208ENST00000505065 PGAM4Q8N0Y7 254 aa7.62□□□□□ -1.19
CDC42SE2-208ENST00000505065 SPACA9Q96E40 222 aaPredicted RBP7.62□□□□□ -1.19
CDC42SE2-208ENST00000505065 BBS4Q96RK4 519 aa7.62□□□□□ -1.19
CDC42SE2-208ENST00000505065 SDF2Q99470 211 aa7.62□□□□□ -1.19
CDC42SE2-208ENST00000505065 RAD21L1Q9H4I0 556 aa7.62□□□□□ -1.19
CDC42SE2-208ENST00000505065 NANOGQ9H9S0 305 aa7.62□□□□□ -1.19
CDC42SE2-208ENST00000505065 CLCA3PQ9Y6N3 262 aa7.62□□□□□ -1.19
CDC42SE2-208ENST00000505065 SHANK1Q9Y566 2161 aa7.62□□□□□ -1.19
CDC42SE2-208ENST00000505065 PEX12O00623 359 aa7.62□□□□□ -1.19
CDC42SE2-208ENST00000505065 THBS1P07996 1170 aa7.62□□□□□ -1.19
CDC42SE2-208ENST00000505065 EEFSECP57772 596 aaKnown RBP7.62□□□□□ -1.19
CDC42SE2-208ENST00000505065 EEF1A1P68104 462 aaKnown RBP7.62□□□□□ -1.19
CDC42SE2-208ENST00000505065 GTDC1Q4AE62 458 aa7.62□□□□□ -1.19
CDC42SE2-208ENST00000505065 IQCCQ4KMZ1 466 aa7.62□□□□□ -1.19
CDC42SE2-208ENST00000505065 SLC16A11Q8NCK7 471 aa7.62□□□□□ -1.19
CDC42SE2-208ENST00000505065 ADCY4Q8NFM4 1077 aa7.62□□□□□ -1.19
CDC42SE2-208ENST00000505065 FBXO27Q8NI29 283 aa7.62□□□□□ -1.19
CDC42SE2-208ENST00000505065 C16orf58Q96GQ5 468 aa7.62□□□□□ -1.19
CDC42SE2-208ENST00000505065 REXO5Q96IC2 774 aaKnown RBP7.62□□□□□ -1.19
CDC42SE2-208ENST00000505065 THOC3Q96J01 351 aaKnown RBP7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms