RNA–Protein interactions for RNA: ENST00000505005.5

NR1I3-220, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 985 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-220ENST00000505005 ABOP16442 354 aa9.07□□□□□ -0.96
NR1I3-220ENST00000505005 ATP6V1C1P21283 382 aa9.07□□□□□ -0.96
NR1I3-220ENST00000505005 TACR1P25103 407 aa9.07□□□□□ -0.96
NR1I3-220ENST00000505005 MSX1P28360 303 aa9.07□□□□□ -0.96
NR1I3-220ENST00000505005 S100A3P33764 101 aa9.07□□□□□ -0.96
NR1I3-220ENST00000505005 CCT3P49368 545 aaKnown RBP9.07□□□□□ -0.96
NR1I3-220ENST00000505005 PPIAP62937 165 aaKnown RBP9.07□□□□□ -0.96
NR1I3-220ENST00000505005 CBX1P83916 185 aa9.07□□□□□ -0.96
NR1I3-220ENST00000505005 ZNF155Q12901 538 aaPredicted RBP9.07□□□□□ -0.96
NR1I3-220ENST00000505005 HSPB3Q12988 150 aa9.07□□□□□ -0.96
NR1I3-220ENST00000505005 GNA13Q14344 377 aa9.07□□□□□ -0.96
NR1I3-220ENST00000505005 SPDYE7PQ495Y7 208 aa9.07□□□□□ -0.96
NR1I3-220ENST00000505005 PDCD4Q53EL6 469 aaKnown RBP9.07□□□□□ -0.96
NR1I3-220ENST00000505005 C4orf17Q53FE4 359 aa9.07□□□□□ -0.96
NR1I3-220ENST00000505005 TMEM107Q6UX40 140 aa9.07□□□□□ -0.96
NR1I3-220ENST00000505005 SLC44A2Q8IWA5 706 aaPredicted RBP9.07□□□□□ -0.96
NR1I3-220ENST00000505005 RIMKLAQ8IXN7 391 aa9.07□□□□□ -0.96
NR1I3-220ENST00000505005 PM20D2Q8IYS1 436 aa9.07□□□□□ -0.96
NR1I3-220ENST00000505005 GOT1L1Q8NHS2 421 aaPredicted RBP9.07□□□□□ -0.96
NR1I3-220ENST00000505005 ADAMTS15Q8TE58 950 aa9.07□□□□□ -0.96
NR1I3-220ENST00000505005 CKAP2Q8WWK9 683 aa9.07□□□□□ -0.96
NR1I3-220ENST00000505005 KAT2AQ92830 837 aa9.07□□□□□ -0.96
NR1I3-220ENST00000505005 OMA1Q96E52 524 aa9.07□□□□□ -0.96
NR1I3-220ENST00000505005 C3orf30Q96M34 536 aa9.07□□□□□ -0.96
NR1I3-220ENST00000505005 ITPAQ9BY32 194 aa9.07□□□□□ -0.96
NR1I3-220ENST00000505005 NXF5Q9H1B4 397 aaKnown RBP9.07□□□□□ -0.96
NR1I3-220ENST00000505005 RAD21L1Q9H4I0 556 aa9.07□□□□□ -0.96
NR1I3-220ENST00000505005 LDAHQ9H6V9 325 aa9.07□□□□□ -0.96
NR1I3-220ENST00000505005 ZCCHC3Q9NUD5 404 aaKnown RBP9.07□□□□□ -0.96
NR1I3-220ENST00000505005 PNPOQ9NVS9 261 aa9.07□□□□□ -0.96
NR1I3-220ENST00000505005 KLRF1Q9NZS2 232 aa9.07□□□□□ -0.96
NR1I3-220ENST00000505005 BAIAP2L1Q9UHR4 511 aa9.07□□□□□ -0.96
NR1I3-220ENST00000505005 BTNL2Q9UIR0 455 aa9.07□□□□□ -0.96
NR1I3-220ENST00000505005 CHCHD2Q9Y6H1 151 aaPredicted RBP9.07□□□□□ -0.96
NR1I3-220ENST00000505005 USH1CQ9Y6N9 552 aa9.07□□□□□ -0.96
NR1I3-220ENST00000505005 ZNF462Q96JM2 2506 aa9.06□□□□□ -0.96
NR1I3-220ENST00000505005 TMEM247A6NEH6 219 aa9.06□□□□□ -0.96
NR1I3-220ENST00000505005 FIGNL2A6NMB9 653 aa9.06□□□□□ -0.96
NR1I3-220ENST00000505005 SLC22A3O75751 556 aa9.06□□□□□ -0.96
NR1I3-220ENST00000505005 AGFG2O95081 481 aa9.06□□□□□ -0.96
NR1I3-220ENST00000505005 NKX2-2O95096 273 aa9.06□□□□□ -0.96
NR1I3-220ENST00000505005 UNC5CO95185 931 aa9.06□□□□□ -0.96
NR1I3-220ENST00000505005 LRATO95237 230 aa9.06□□□□□ -0.96
NR1I3-220ENST00000505005 PSMG1O95456 288 aa9.06□□□□□ -0.96
NR1I3-220ENST00000505005 NADKO95544 446 aaPredicted RBP9.06□□□□□ -0.96
NR1I3-220ENST00000505005 KRT75O95678 551 aa9.06□□□□□ -0.96
NR1I3-220ENST00000505005 IL33O95760 270 aa9.06□□□□□ -0.96
NR1I3-220ENST00000505005 F10P00742 488 aa9.06□□□□□ -0.96
NR1I3-220ENST00000505005 CLPSP04118 112 aa9.06□□□□□ -0.96
NR1I3-220ENST00000505005 NGFRP08138 427 aa9.06□□□□□ -0.96
NR1I3-220ENST00000505005 CT45A8P0DMV1 189 aa9.06□□□□□ -0.96
NR1I3-220ENST00000505005 CT45A9P0DMV2 189 aa9.06□□□□□ -0.96
NR1I3-220ENST00000505005 KITP10721 976 aa9.06□□□□□ -0.96
NR1I3-220ENST00000505005 ESRRAP11474 423 aaPredicted RBP9.06□□□□□ -0.96
NR1I3-220ENST00000505005 AGAP20933 346 aa9.06□□□□□ -0.96
NR1I3-220ENST00000505005 UQCRC2P22695 453 aa9.06□□□□□ -0.96
NR1I3-220ENST00000505005 LSP1P33241 339 aa9.06□□□□□ -0.96
NR1I3-220ENST00000505005 PTGS2P35354 604 aa9.06□□□□□ -0.96
NR1I3-220ENST00000505005 PIGAP37287 484 aa9.06□□□□□ -0.96
NR1I3-220ENST00000505005 MC3RP41968 323 aa9.06□□□□□ -0.96
NR1I3-220ENST00000505005 CASP3P42574 277 aa9.06□□□□□ -0.96
NR1I3-220ENST00000505005 MRPL19P49406 292 aaKnown RBP9.06□□□□□ -0.96
NR1I3-220ENST00000505005 SMSP52788 366 aa9.06□□□□□ -0.96
NR1I3-220ENST00000505005 DIO3P55073 304 aa9.06□□□□□ -0.96
NR1I3-220ENST00000505005 EEF1A1P68104 462 aaKnown RBP9.06□□□□□ -0.96
NR1I3-220ENST00000505005 MRPS35P82673 323 aaKnown RBP9.06□□□□□ -0.96
NR1I3-220ENST00000505005 C17orf67Q0P5P2 114 aa9.06□□□□□ -0.96
NR1I3-220ENST00000505005 UBAP2LQ14157 1087 aaKnown RBP9.06□□□□□ -0.96
NR1I3-220ENST00000505005 GANABQ14697 944 aaKnown RBP9.06□□□□□ -0.96
NR1I3-220ENST00000505005 PTGR1Q14914 329 aa9.06□□□□□ -0.96
NR1I3-220ENST00000505005 EXOSC7Q15024 291 aaKnown RBP9.06□□□□□ -0.96
NR1I3-220ENST00000505005 ZNF750Q32MQ0 723 aa9.06□□□□□ -0.96
NR1I3-220ENST00000505005 PGS1Q32NB8 556 aa9.06□□□□□ -0.96
NR1I3-220ENST00000505005 CT45A2Q5DJT8 189 aa9.06□□□□□ -0.96
NR1I3-220ENST00000505005 ATAD3BQ5T9A4 648 aa9.06□□□□□ -0.96
NR1I3-220ENST00000505005 ZNF468Q5VIY5 522 aaPredicted RBP9.06□□□□□ -0.96
NR1I3-220ENST00000505005 EEF1A1P5Q5VTE0 462 aa9.06□□□□□ -0.96
NR1I3-220ENST00000505005 EPGNQ6UW88 154 aa9.06□□□□□ -0.96
NR1I3-220ENST00000505005 RPTNQ6XPR3 784 aa9.06□□□□□ -0.96
NR1I3-220ENST00000505005 DGAT2L6Q6ZPD8 337 aa9.06□□□□□ -0.96
NR1I3-220ENST00000505005 MDGA2Q7Z553 956 aa9.06□□□□□ -0.96
NR1I3-220ENST00000505005 SPPL2CQ8IUH8 684 aa9.06□□□□□ -0.96
NR1I3-220ENST00000505005 MIER2Q8N344 545 aa9.06□□□□□ -0.96
NR1I3-220ENST00000505005 ZNF321PQ8N8H1 164 aa9.06□□□□□ -0.96
NR1I3-220ENST00000505005 OR7G2Q8NG99 324 aa9.06□□□□□ -0.96
NR1I3-220ENST00000505005 OR1J4Q8NGS1 313 aa9.06□□□□□ -0.96
NR1I3-220ENST00000505005 PRR7Q8TB68 274 aa9.06□□□□□ -0.96
NR1I3-220ENST00000505005 GPR151Q8TDV0 419 aa9.06□□□□□ -0.96
NR1I3-220ENST00000505005 HOXB13Q92826 284 aaPredicted RBP9.06□□□□□ -0.96
NR1I3-220ENST00000505005 GFM2Q969S9 779 aaKnown RBP9.06□□□□□ -0.96
NR1I3-220ENST00000505005 RELTQ969Z4 430 aa9.06□□□□□ -0.96
NR1I3-220ENST00000505005 TAAR6Q96RI8 345 aa9.06□□□□□ -0.96
NR1I3-220ENST00000505005 C1orf50Q9BV19 199 aa9.06□□□□□ -0.96
NR1I3-220ENST00000505005 ACTRT3Q9BYD9 372 aa9.06□□□□□ -0.96
NR1I3-220ENST00000505005 C20orf27Q9GZN8 174 aa9.06□□□□□ -0.96
NR1I3-220ENST00000505005 PIGUQ9H490 435 aa9.06□□□□□ -0.96
NR1I3-220ENST00000505005 RUBCNLQ9H714 662 aa9.06□□□□□ -0.96
NR1I3-220ENST00000505005 ZDHHC11Q9H8X9 412 aa9.06□□□□□ -0.96
NR1I3-220ENST00000505005 SH2D2AQ9NP31 389 aa9.06□□□□□ -0.96
NR1I3-220ENST00000505005 TCF7L2Q9NQB0 619 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms