RNA–Protein interactions for RNA: ENST00000504761.6

TCOF1-207, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TCOF1, Length 4,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-207ENST00000504761 TANKQ92844 425 aa13.27□□□□□ -0.29
TCOF1-207ENST00000504761 TRNT1Q96Q11 434 aaKnown RBP13.27□□□□□ -0.29
TCOF1-207ENST00000504761 CRB3Q9BUF7 120 aa13.27□□□□□ -0.29
TCOF1-207ENST00000504761 PCDHGA8Q9Y5G5 932 aa13.27□□□□□ -0.29
TCOF1-207ENST00000504761 PSME4Q14997 1843 aa13.27□□□□□ -0.29
TCOF1-207ENST00000504761 KIF13BQ9NQT8 1826 aa13.27□□□□□ -0.29
TCOF1-207ENST00000504761 RBBP6Q7Z6E9 1792 aaKnown RBP13.27□□□□□ -0.29
TCOF1-207ENST00000504761 LRIT2A6NDA9 550 aa13.27□□□□□ -0.29
TCOF1-207ENST00000504761 TBX1O43435 398 aa13.27□□□□□ -0.29
TCOF1-207ENST00000504761 TMPRSS11DO60235 418 aa13.27□□□□□ -0.29
TCOF1-207ENST00000504761 NAA10P41227 235 aaPredicted RBP13.27□□□□□ -0.29
TCOF1-207ENST00000504761 LEXMQ3ZCV2 418 aa13.27□□□□□ -0.29
TCOF1-207ENST00000504761 KLHL24Q6TFL4 600 aa13.27□□□□□ -0.29
TCOF1-207ENST00000504761 Q7L0L9 218 aa13.27□□□□□ -0.29
TCOF1-207ENST00000504761 FBXL6Q8N531 539 aa13.27□□□□□ -0.29
TCOF1-207ENST00000504761 OR6C4Q8NGE1 309 aa13.27□□□□□ -0.29
TCOF1-207ENST00000504761 THEM6Q8WUY1 208 aa13.27□□□□□ -0.29
TCOF1-207ENST00000504761 NKIRAS2Q9NYR9 191 aa13.27□□□□□ -0.29
TCOF1-207ENST00000504761 BRCA1P38398 1863 aaKnown RBP13.26□□□□□ -0.29
TCOF1-207ENST00000504761 CLDN25C9JDP6 229 aa13.26□□□□□ -0.29
TCOF1-207ENST00000504761 PRAMEF10O60809 474 aa13.26□□□□□ -0.29
TCOF1-207ENST00000504761 SLC6A6P31641 620 aa13.26□□□□□ -0.29
TCOF1-207ENST00000504761 MICAQ29983 383 aa13.26□□□□□ -0.29
TCOF1-207ENST00000504761 C11orf88Q6PI97 169 aa13.26□□□□□ -0.29
TCOF1-207ENST00000504761 KLHL17Q6TDP4 642 aa13.26□□□□□ -0.29
TCOF1-207ENST00000504761 MARCH9Q86YJ5 346 aa13.26□□□□□ -0.29
TCOF1-207ENST00000504761 OR8J1Q8NGP2 316 aa13.26□□□□□ -0.29
TCOF1-207ENST00000504761 TFAP2CQ92754 450 aa13.26□□□□□ -0.29
TCOF1-207ENST00000504761 TBC1D20Q96BZ9 403 aa13.26□□□□□ -0.29
TCOF1-207ENST00000504761 SLC41A3Q96GZ6 507 aa13.26□□□□□ -0.29
TCOF1-207ENST00000504761 ADAD1Q96M93 576 aaKnown RBP13.26□□□□□ -0.29
TCOF1-207ENST00000504761 PRR14Q9BWN1 585 aa13.26□□□□□ -0.29
TCOF1-207ENST00000504761 TCEAL2Q9H3H9 227 aaPredicted RBP13.26□□□□□ -0.29
TCOF1-207ENST00000504761 SRA1Q9HD15 236 aaKnown RBP13.26□□□□□ -0.29
TCOF1-207ENST00000504761 RLIMQ9NVW2 624 aa13.26□□□□□ -0.29
TCOF1-207ENST00000504761 CNOT11Q9UKZ1 510 aaKnown RBP13.26□□□□□ -0.29
TCOF1-207ENST00000504761 ICKQ9UPZ9 632 aa13.26□□□□□ -0.29
TCOF1-207ENST00000504761 PPIL1Q9Y3C6 166 aa13.26□□□□□ -0.29
TCOF1-207ENST00000504761 HS3ST3A1Q9Y663 406 aa13.26□□□□□ -0.29
TCOF1-207ENST00000504761 C5orf67F2Z3F1 127 aa13.26□□□□□ -0.29
TCOF1-207ENST00000504761 RNF13O43567 381 aa13.26□□□□□ -0.29
TCOF1-207ENST00000504761 COL9A1P20849 921 aa13.26□□□□□ -0.29
TCOF1-207ENST00000504761 MYF6P23409 242 aa13.26□□□□□ -0.29
TCOF1-207ENST00000504761 NDUFAF6Q330K2 333 aa13.26□□□□□ -0.29
TCOF1-207ENST00000504761 FAM71E1Q6IPT2 247 aa13.26□□□□□ -0.29
TCOF1-207ENST00000504761 ARL14Q8N4G2 192 aa13.26□□□□□ -0.29
TCOF1-207ENST00000504761 ZFP41Q8N8Y5 198 aa13.26□□□□□ -0.29
TCOF1-207ENST00000504761 CYB561A3Q8NBI2 242 aa13.26□□□□□ -0.29
TCOF1-207ENST00000504761 SP7Q8TDD2 431 aaPredicted RBP13.26□□□□□ -0.29
TCOF1-207ENST00000504761 C11orf24Q96F05 449 aaPredicted RBP13.26□□□□□ -0.29
TCOF1-207ENST00000504761 TMEM80Q96HE8 168 aa13.26□□□□□ -0.29
TCOF1-207ENST00000504761 ZNF597Q96LX8 424 aa13.26□□□□□ -0.29
TCOF1-207ENST00000504761 SECISBP2Q96T21 854 aaKnown RBP13.26□□□□□ -0.29
TCOF1-207ENST00000504761 POLDIP3Q9BY77 421 aaKnown RBP13.26□□□□□ -0.29
TCOF1-207ENST00000504761 ANKRD60Q9BZ19 345 aa13.26□□□□□ -0.29
TCOF1-207ENST00000504761 DPH1Q9BZG8 443 aa13.26□□□□□ -0.29
TCOF1-207ENST00000504761 WDR12Q9GZL7 423 aaKnown RBP13.26□□□□□ -0.29
TCOF1-207ENST00000504761 RACGAP1Q9H0H5 632 aa13.26□□□□□ -0.29
TCOF1-207ENST00000504761 ZC4H2Q9NQZ6 224 aa13.26□□□□□ -0.29
TCOF1-207ENST00000504761 ACSS1Q9NUB1 689 aaPredicted RBP13.26□□□□□ -0.29
TCOF1-207ENST00000504761 MCUBQ9NWR8 336 aa13.26□□□□□ -0.29
TCOF1-207ENST00000504761 EPHA6Q9UF33 1036 aa13.26□□□□□ -0.29
TCOF1-207ENST00000504761 SLC7A7Q9UM01 511 aa13.26□□□□□ -0.29
TCOF1-207ENST00000504761 KRBA1A5PL33 1030 aa13.26□□□□□ -0.29
TCOF1-207ENST00000504761 FXYD1O00168 92 aa13.26□□□□□ -0.29
TCOF1-207ENST00000504761 PRAMEF2O60811 474 aa13.26□□□□□ -0.29
TCOF1-207ENST00000504761 SYPP08247 313 aa13.26□□□□□ -0.29
TCOF1-207ENST00000504761 GSTM2P28161 218 aa13.26□□□□□ -0.29
TCOF1-207ENST00000504761 FNTBP49356 437 aa13.26□□□□□ -0.29
TCOF1-207ENST00000504761 HLCSP50747 726 aa13.26□□□□□ -0.29
TCOF1-207ENST00000504761 TFF2Q03403 129 aa13.26□□□□□ -0.29
TCOF1-207ENST00000504761 MVKQ03426 396 aa13.26□□□□□ -0.29
TCOF1-207ENST00000504761 HTR4Q13639 388 aa13.26□□□□□ -0.29
TCOF1-207ENST00000504761 CCINQ13939 588 aa13.26□□□□□ -0.29
TCOF1-207ENST00000504761 IDNKQ5T6J7 187 aa13.26□□□□□ -0.29
TCOF1-207ENST00000504761 LCN1P1Q5VSP4 162 aa13.26□□□□□ -0.29
TCOF1-207ENST00000504761 FCRLBQ6BAA4 426 aa13.26□□□□□ -0.29
TCOF1-207ENST00000504761 OR5M10Q6IEU7 315 aa13.26□□□□□ -0.29
TCOF1-207ENST00000504761 TMEM92Q6UXU6 159 aa13.26□□□□□ -0.29
TCOF1-207ENST00000504761 ZNF676Q8N7Q3 588 aa13.26□□□□□ -0.29
TCOF1-207ENST00000504761 BARD1Q99728 777 aaKnown RBP13.26□□□□□ -0.29
TCOF1-207ENST00000504761 SLC25A37Q9NYZ2 338 aa13.26□□□□□ -0.29
TCOF1-207ENST00000504761 ABI3Q9P2A4 366 aa13.26□□□□□ -0.29
TCOF1-207ENST00000504761 RNF6Q9Y252 685 aa13.26□□□□□ -0.29
TCOF1-207ENST00000504761 TNFRSF10CO14798 259 aa13.25□□□□□ -0.29
TCOF1-207ENST00000504761 TSC22D2O75157 780 aa13.25□□□□□ -0.29
TCOF1-207ENST00000504761 ADORA3P0DMS8 318 aa13.25□□□□□ -0.29
TCOF1-207ENST00000504761 ARAFP10398 606 aa13.25□□□□□ -0.29
TCOF1-207ENST00000504761 C7P10643 843 aa13.25□□□□□ -0.29
TCOF1-207ENST00000504761 OTX2P32243 289 aa13.25□□□□□ -0.29
TCOF1-207ENST00000504761 RCVRNP35243 200 aa13.25□□□□□ -0.29
TCOF1-207ENST00000504761 OR1D5P58170 312 aa13.25□□□□□ -0.29
TCOF1-207ENST00000504761 KIAA1024LP59773 190 aa13.25□□□□□ -0.29
TCOF1-207ENST00000504761 TMEM44Q2T9K0 475 aa13.25□□□□□ -0.29
TCOF1-207ENST00000504761 LIPKQ5VXJ0 399 aa13.25□□□□□ -0.29
TCOF1-207ENST00000504761 TMEM64Q6YI46 380 aa13.25□□□□□ -0.29
TCOF1-207ENST00000504761 TMEM102Q8N9M5 508 aaPredicted RBP13.25□□□□□ -0.29
TCOF1-207ENST00000504761 EDAQ92838 391 aa13.25□□□□□ -0.29
TCOF1-207ENST00000504761 SGPP1Q9BX95 441 aa13.25□□□□□ -0.29
TCOF1-207ENST00000504761 STMN3Q9NZ72 180 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms