RNA–Protein interactions for RNA: ENST00000504663.1

TPM3-217, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 870 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-217ENST00000504663 RPS4Y1P22090 263 aaKnown RBP9.65□□□□□ -0.86
TPM3-217ENST00000504663 PRIM2P49643 509 aa9.65□□□□□ -0.86
TPM3-217ENST00000504663 AP2B1P63010 937 aa9.65□□□□□ -0.86
TPM3-217ENST00000504663 VLDLRP98155 873 aa9.65□□□□□ -0.86
TPM3-217ENST00000504663 BIKQ13323 160 aa9.65□□□□□ -0.86
TPM3-217ENST00000504663 EIF3IQ13347 325 aaKnown RBP9.65□□□□□ -0.86
TPM3-217ENST00000504663 MAP7Q14244 749 aa9.65□□□□□ -0.86
TPM3-217ENST00000504663 ZNF267Q14586 743 aaPredicted RBP9.65□□□□□ -0.86
TPM3-217ENST00000504663 NCF4Q15080 339 aa9.65□□□□□ -0.86
TPM3-217ENST00000504663 ARHGAP11BQ3KRB8 267 aa9.65□□□□□ -0.86
TPM3-217ENST00000504663 CT45A2Q5DJT8 189 aa9.65□□□□□ -0.86
TPM3-217ENST00000504663 OGFRL1Q5TC84 451 aaPredicted RBP9.65□□□□□ -0.86
TPM3-217ENST00000504663 PRAMEF8Q5VWM4 474 aa9.65□□□□□ -0.86
TPM3-217ENST00000504663 PRAMEF7Q5VXH5 474 aa9.65□□□□□ -0.86
TPM3-217ENST00000504663 TYW3Q6IPR3 259 aaKnown RBP9.65□□□□□ -0.86
TPM3-217ENST00000504663 REEP3Q6NUK4 255 aa9.65□□□□□ -0.86
TPM3-217ENST00000504663 BHLHB9Q6PI77 547 aa9.65□□□□□ -0.86
TPM3-217ENST00000504663 SLC30A8Q8IWU4 369 aa9.65□□□□□ -0.86
TPM3-217ENST00000504663 C9orf40Q8IXQ3 194 aa9.65□□□□□ -0.86
TPM3-217ENST00000504663 METTL25Q8N6Q8 603 aa9.65□□□□□ -0.86
TPM3-217ENST00000504663 CDRT4Q8N9R6 151 aa9.65□□□□□ -0.86
TPM3-217ENST00000504663 OR4D11Q8NGI4 311 aa9.65□□□□□ -0.86
TPM3-217ENST00000504663 C16orf52Q8NHV5 167 aa9.65□□□□□ -0.86
TPM3-217ENST00000504663 PIK3R3Q92569 461 aa9.65□□□□□ -0.86
TPM3-217ENST00000504663 STMN2Q93045 179 aa9.65□□□□□ -0.86
TPM3-217ENST00000504663 SENP5Q96HI0 755 aaPredicted RBP9.65□□□□□ -0.86
TPM3-217ENST00000504663 PYURFQ96I23 114 aa9.65□□□□□ -0.86
TPM3-217ENST00000504663 HSH2DQ96JZ2 352 aa9.65□□□□□ -0.86
TPM3-217ENST00000504663 BTBD9Q96Q07 612 aa9.65□□□□□ -0.86
TPM3-217ENST00000504663 TRNT1Q96Q11 434 aaKnown RBP9.65□□□□□ -0.86
TPM3-217ENST00000504663 TAAR9Q96RI9 348 aa9.65□□□□□ -0.86
TPM3-217ENST00000504663 TREX2Q9BQ50 279 aaPredicted RBP9.65□□□□□ -0.86
TPM3-217ENST00000504663 NUDT9Q9BW91 350 aa9.65□□□□□ -0.86
TPM3-217ENST00000504663 YIPF2Q9BWQ6 316 aa9.65□□□□□ -0.86
TPM3-217ENST00000504663 ITPAQ9BY32 194 aa9.65□□□□□ -0.86
TPM3-217ENST00000504663 ULBP3Q9BZM4 244 aa9.65□□□□□ -0.86
TPM3-217ENST00000504663 SAP130Q9H0E3 1048 aa9.65□□□□□ -0.86
TPM3-217ENST00000504663 RASSF4Q9H2L5 321 aa9.65□□□□□ -0.86
TPM3-217ENST00000504663 MAGIXQ9H6Y5 334 aa9.65□□□□□ -0.86
TPM3-217ENST00000504663 NTN4Q9HB63 628 aa9.65□□□□□ -0.86
TPM3-217ENST00000504663 PNO1Q9NRX1 252 aaKnown RBP9.65□□□□□ -0.86
TPM3-217ENST00000504663 THUMPD1Q9NXG2 353 aaKnown RBP9.65□□□□□ -0.86
TPM3-217ENST00000504663 VNN3Q9NY84 501 aa9.65□□□□□ -0.86
TPM3-217ENST00000504663 IFT80Q9P2H3 777 aaPredicted RBP9.65□□□□□ -0.86
TPM3-217ENST00000504663 BCAP29Q9UHQ4 241 aa9.65□□□□□ -0.86
TPM3-217ENST00000504663 KCNE5Q9UJ90 142 aa9.65□□□□□ -0.86
TPM3-217ENST00000504663 ZNF451Q9Y4E5 1061 aa9.65□□□□□ -0.86
TPM3-217ENST00000504663 PCDHGA8Q9Y5G5 932 aa9.65□□□□□ -0.86
TPM3-217ENST00000504663 IGHV3-20A0A0C4DH32 117 aa9.64□□□□□ -0.87
TPM3-217ENST00000504663 SAGE2PA6NJ88 616 aa9.64□□□□□ -0.87
TPM3-217ENST00000504663 A8MUA0 341 aa9.64□□□□□ -0.87
TPM3-217ENST00000504663 NPIPB9F8W1W9 429 aa9.64□□□□□ -0.87
TPM3-217ENST00000504663 M0QX08 132 aa9.64□□□□□ -0.87
TPM3-217ENST00000504663 ADAM10O14672 748 aa9.64□□□□□ -0.87
TPM3-217ENST00000504663 SLC28A2O43868 658 aa9.64□□□□□ -0.87
TPM3-217ENST00000504663 PRKNO60260 465 aaPredicted RBP9.64□□□□□ -0.87
TPM3-217ENST00000504663 KIAA0513O60268 411 aa9.64□□□□□ -0.87
TPM3-217ENST00000504663 TPST1O60507 370 aa9.64□□□□□ -0.87
TPM3-217ENST00000504663 FCMRO60667 390 aa9.64□□□□□ -0.87
TPM3-217ENST00000504663 PRAMEF2O60811 474 aa9.64□□□□□ -0.87
TPM3-217ENST00000504663 RAP2AP10114 183 aa9.64□□□□□ -0.87
TPM3-217ENST00000504663 CDK4P11802 303 aa9.64□□□□□ -0.87
TPM3-217ENST00000504663 TNFRSF1BP20333 461 aa9.64□□□□□ -0.87
TPM3-217ENST00000504663 PSMA4P25789 261 aaKnown RBP9.64□□□□□ -0.87
TPM3-217ENST00000504663 PEX2P28328 305 aa9.64□□□□□ -0.87
TPM3-217ENST00000504663 PTDSS1P48651 473 aaKnown RBP9.64□□□□□ -0.87
TPM3-217ENST00000504663 CHRNEQ04844 493 aa9.64□□□□□ -0.87
TPM3-217ENST00000504663 ZNF155Q12901 538 aaPredicted RBP9.64□□□□□ -0.87
TPM3-217ENST00000504663 PUM1Q14671 1186 aaKnown RBP eCLIP9.64□□□□□ -0.871e-13■□□□□ 9.5
TPM3-217ENST00000504663 EBPQ15125 230 aaKnown RBP9.64□□□□□ -0.87
TPM3-217ENST00000504663 ATP6AP1Q15904 470 aa9.64□□□□□ -0.87
TPM3-217ENST00000504663 DUSP7Q16829 419 aa9.64□□□□□ -0.87
TPM3-217ENST00000504663 GLIPR1L2Q4G1C9 344 aa9.64□□□□□ -0.87
TPM3-217ENST00000504663 TBCELQ5QJ74 424 aa9.64□□□□□ -0.87
TPM3-217ENST00000504663 DCST2Q5T1A1 773 aa9.64□□□□□ -0.87
TPM3-217ENST00000504663 CCNJQ5T5M9 372 aa9.64□□□□□ -0.87
TPM3-217ENST00000504663 DCAF12Q5T6F0 453 aa9.64□□□□□ -0.87
TPM3-217ENST00000504663 LRRC74BQ6ZQY2 392 aa9.64□□□□□ -0.87
TPM3-217ENST00000504663 PATL1Q86TB9 770 aaKnown RBP9.64□□□□□ -0.87
TPM3-217ENST00000504663 TSPYL5Q86VY4 417 aaPredicted RBP9.64□□□□□ -0.87
TPM3-217ENST00000504663 LACC1Q8IV20 430 aa9.64□□□□□ -0.87
TPM3-217ENST00000504663 APCDD1LQ8NCL9 501 aa9.64□□□□□ -0.87
TPM3-217ENST00000504663 OR7G1Q8NGA0 311 aa9.64□□□□□ -0.87
TPM3-217ENST00000504663 OR4N2Q8NGD1 307 aa9.64□□□□□ -0.87
TPM3-217ENST00000504663 OR14A16Q8NHC5 309 aa9.64□□□□□ -0.87
TPM3-217ENST00000504663 WDR36Q8NI36 951 aaKnown RBP9.64□□□□□ -0.87
TPM3-217ENST00000504663 BBS10Q8TAM1 723 aa9.64□□□□□ -0.87
TPM3-217ENST00000504663 XAGE5Q8WWM1 108 aa9.64□□□□□ -0.87
TPM3-217ENST00000504663 ADIPOR1Q96A54 375 aa9.64□□□□□ -0.87
TPM3-217ENST00000504663 ZG16BQ96DA0 208 aa9.64□□□□□ -0.87
TPM3-217ENST00000504663 SLC47A1Q96FL8 570 aa9.64□□□□□ -0.87
TPM3-217ENST00000504663 RBM18Q96H35 190 aaKnown RBP9.64□□□□□ -0.87
TPM3-217ENST00000504663 RNF145Q96MT1 663 aa9.64□□□□□ -0.87
TPM3-217ENST00000504663 ZNF578Q96N58 590 aaPredicted RBP9.64□□□□□ -0.87
TPM3-217ENST00000504663 LMF1Q96S06 567 aa9.64□□□□□ -0.87
TPM3-217ENST00000504663 SDF2Q99470 211 aa9.64□□□□□ -0.87
TPM3-217ENST00000504663 SEPHS2Q99611 448 aa9.64□□□□□ -0.87
TPM3-217ENST00000504663 ZPBPQ9BS86 351 aa9.64□□□□□ -0.87
TPM3-217ENST00000504663 CNPPD1Q9BV87 410 aa9.64□□□□□ -0.87
TPM3-217ENST00000504663 CHID1Q9BWS9 393 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms