RNA–Protein interactions for RNA: ENST00000504000.1

SNF8-203, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 1,899 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-203ENST00000504000 KIAA1161Q6NSJ0 714 aa14.08□□□□□ -0.16
SNF8-203ENST00000504000 KLHL36Q8N4N3 616 aa14.08□□□□□ -0.16
SNF8-203ENST00000504000 TP53I13Q8NBR0 393 aaPredicted RBP14.08□□□□□ -0.16
SNF8-203ENST00000504000 OR8D4Q8NGM9 314 aa14.08□□□□□ -0.16
SNF8-203ENST00000504000 UBASH3BQ8TF42 649 aa14.08□□□□□ -0.16
SNF8-203ENST00000504000 JPH3Q8WXH2 748 aaPredicted RBP14.08□□□□□ -0.16
SNF8-203ENST00000504000 OR8D1Q8WZ84 308 aa14.08□□□□□ -0.16
SNF8-203ENST00000504000 DIO2Q92813 273 aa14.08□□□□□ -0.16
SNF8-203ENST00000504000 ARRDC3Q96B67 414 aa14.08□□□□□ -0.16
SNF8-203ENST00000504000 PRAP1Q96NZ9 151 aa14.08□□□□□ -0.16
SNF8-203ENST00000504000 EGLN3Q9H6Z9 239 aa14.08□□□□□ -0.16
SNF8-203ENST00000504000 ING3Q9NXR8 418 aa14.08□□□□□ -0.16
SNF8-203ENST00000504000 COMMD3Q9UBI1 195 aa14.08□□□□□ -0.16
SNF8-203ENST00000504000 CBLCQ9ULV8 474 aa14.08□□□□□ -0.16
SNF8-203ENST00000504000 CLCA2Q9UQC9 943 aa14.08□□□□□ -0.16
SNF8-203ENST00000504000 BOLA1Q9Y3E2 137 aa14.08□□□□□ -0.16
SNF8-203ENST00000504000 WNT6Q9Y6F9 365 aa14.08□□□□□ -0.16
SNF8-203ENST00000504000 COL4A3Q01955 1670 aa14.07□□□□□ -0.16
SNF8-203ENST00000504000 LRIT2A6NDA9 550 aa14.07□□□□□ -0.16
SNF8-203ENST00000504000 OR6C70A6NIJ9 312 aa14.07□□□□□ -0.16
SNF8-203ENST00000504000 FAM170BA6NMN3 283 aa14.07□□□□□ -0.16
SNF8-203ENST00000504000 ARHGEF9O43307 516 aa14.07□□□□□ -0.16
SNF8-203ENST00000504000 ORC5O43913 435 aa14.07□□□□□ -0.16
SNF8-203ENST00000504000 EFCAB14O75071 495 aa14.07□□□□□ -0.16
SNF8-203ENST00000504000 CSF2P04141 144 aa14.07□□□□□ -0.16
SNF8-203ENST00000504000 ADRB3P13945 408 aa14.07□□□□□ -0.16
SNF8-203ENST00000504000 CA8P35219 290 aa14.07□□□□□ -0.16
SNF8-203ENST00000504000 BUD31P41223 144 aaPredicted RBP14.07□□□□□ -0.16
SNF8-203ENST00000504000 OMPP47874 163 aa14.07□□□□□ -0.16
SNF8-203ENST00000504000 RNF144AP50876 292 aaPredicted RBP14.07□□□□□ -0.16
SNF8-203ENST00000504000 NCBP2P52298 156 aaKnown RBP eCLIP14.07□□□□□ -0.16
SNF8-203ENST00000504000 CDH11P55287 796 aa14.07□□□□□ -0.16
SNF8-203ENST00000504000 TAS2R41P59536 307 aa14.07□□□□□ -0.16
SNF8-203ENST00000504000 CSNK1G2P78368 415 aa14.07□□□□□ -0.16
SNF8-203ENST00000504000 HOXC5Q00444 222 aa14.07□□□□□ -0.16
SNF8-203ENST00000504000 CD83Q01151 205 aa14.07□□□□□ -0.16
SNF8-203ENST00000504000 EFR3AQ14156 821 aa14.07□□□□□ -0.16
SNF8-203ENST00000504000 DECR1Q16698 335 aa14.07□□□□□ -0.16
SNF8-203ENST00000504000 TYW3Q6IPR3 259 aaKnown RBP14.07□□□□□ -0.16
SNF8-203ENST00000504000 RAB42Q8N4Z0 105 aa14.07□□□□□ -0.16
SNF8-203ENST00000504000 YIPF7Q8N8F6 280 aa14.07□□□□□ -0.16
SNF8-203ENST00000504000 TMEM145Q8NBT3 493 aa14.07□□□□□ -0.16
SNF8-203ENST00000504000 NEIL3Q8TAT5 605 aa14.07□□□□□ -0.16
SNF8-203ENST00000504000 KCNK12Q9HB15 430 aa14.07□□□□□ -0.16
SNF8-203ENST00000504000 DIABLOQ9NR28 239 aa14.07□□□□□ -0.16
SNF8-203ENST00000504000 EDDM13A0A1B0GTR0 161 aa14.06□□□□□ -0.16
SNF8-203ENST00000504000 FAM240BA0A1B0GVZ2 78 aa14.06□□□□□ -0.16
SNF8-203ENST00000504000 FEZF1A0PJY2 475 aa14.06□□□□□ -0.16
SNF8-203ENST00000504000 TNFRSF10AO00220 468 aa14.06□□□□□ -0.16
SNF8-203ENST00000504000 GABRPO00591 440 aa14.06□□□□□ -0.16
SNF8-203ENST00000504000 SURF4O15260 269 aa14.06□□□□□ -0.16
SNF8-203ENST00000504000 OR1F1O43749 312 aa14.06□□□□□ -0.16
SNF8-203ENST00000504000 HTR1FP30939 366 aa14.06□□□□□ -0.16
SNF8-203ENST00000504000 BTG1P62324 171 aa14.06□□□□□ -0.16
SNF8-203ENST00000504000 DEFB103AP81534 67 aa14.06□□□□□ -0.16
SNF8-203ENST00000504000 LSM11P83369 360 aaKnown RBP eCLIP14.06□□□□□ -0.16
SNF8-203ENST00000504000 SLC9A5Q14940 896 aa14.06□□□□□ -0.16
SNF8-203ENST00000504000 DHCR24Q15392 516 aa14.06□□□□□ -0.16
SNF8-203ENST00000504000 ZIC1Q15915 447 aa14.06□□□□□ -0.16
SNF8-203ENST00000504000 HNRNPA1L2Q32P51 320 aaKnown RBP14.06□□□□□ -0.16
SNF8-203ENST00000504000 C9orf64Q5T6V5 341 aa14.06□□□□□ -0.16
SNF8-203ENST00000504000 SLC39A5Q6ZMH5 540 aa14.06□□□□□ -0.16
SNF8-203ENST00000504000 LRRTM4Q86VH4 590 aa14.06□□□□□ -0.16
SNF8-203ENST00000504000 TRIM48Q8IWZ4 208 aa14.06□□□□□ -0.16
SNF8-203ENST00000504000 C2orf73Q8N5S3 287 aaPredicted RBP14.06□□□□□ -0.16
SNF8-203ENST00000504000 PIGXQ8TBF5 258 aa14.06□□□□□ -0.16
SNF8-203ENST00000504000 CXorf40AQ8TE69 158 aa14.06□□□□□ -0.16
SNF8-203ENST00000504000 CREB3L1Q96BA8 519 aa14.06□□□□□ -0.16
SNF8-203ENST00000504000 KCTD12Q96CX2 325 aaKnown RBP14.06□□□□□ -0.16
SNF8-203ENST00000504000 BBS4Q96RK4 519 aa14.06□□□□□ -0.16
SNF8-203ENST00000504000 TOR4AQ9NXH8 423 aa14.06□□□□□ -0.16
SNF8-203ENST00000504000 TBX21Q9UL17 535 aa14.06□□□□□ -0.16
SNF8-203ENST00000504000 ALG5Q9Y673 324 aa14.06□□□□□ -0.16
SNF8-203ENST00000504000 KLF4O43474 513 aa14.06□□□□□ -0.16
SNF8-203ENST00000504000 HPGDSO60760 199 aa14.06□□□□□ -0.16
SNF8-203ENST00000504000 ZNF780AO75290 641 aaPredicted RBP14.06□□□□□ -0.16
SNF8-203ENST00000504000 LALBAP00709 142 aa14.06□□□□□ -0.16
SNF8-203ENST00000504000 HMGN1P05114 100 aa14.06□□□□□ -0.16
SNF8-203ENST00000504000 HMGN2P05204 90 aaKnown RBP14.06□□□□□ -0.16
SNF8-203ENST00000504000 PSKH1P11801 424 aa14.06□□□□□ -0.16
SNF8-203ENST00000504000 CD53P19397 219 aa14.06□□□□□ -0.16
SNF8-203ENST00000504000 PRKAR1BP31321 381 aa14.06□□□□□ -0.16
SNF8-203ENST00000504000 SSR2P43308 183 aa14.06□□□□□ -0.16
SNF8-203ENST00000504000 TSFMP43897 325 aaKnown RBP14.06□□□□□ -0.16
SNF8-203ENST00000504000 RRAS2P62070 204 aaPredicted RBP14.06□□□□□ -0.16
SNF8-203ENST00000504000 PRR5P85299 388 aa14.06□□□□□ -0.16
SNF8-203ENST00000504000 PRDX1Q06830 199 aaKnown RBP14.06□□□□□ -0.16
SNF8-203ENST00000504000 DMPKQ09013 629 aa14.06□□□□□ -0.16
SNF8-203ENST00000504000 ADAM15Q13444 863 aa14.06□□□□□ -0.16
SNF8-203ENST00000504000 ELAVL3Q14576 367 aaKnown RBP14.06□□□□□ -0.16
SNF8-203ENST00000504000 CEBPEQ15744 281 aa14.06□□□□□ -0.16
SNF8-203ENST00000504000 SNAP47Q5SQN1 464 aa14.06□□□□□ -0.16
SNF8-203ENST00000504000 MRM1Q6IN84 353 aaKnown RBP14.06□□□□□ -0.16
SNF8-203ENST00000504000 CREB3L2Q70SY1 520 aa14.06□□□□□ -0.16
SNF8-203ENST00000504000 ZNF767PQ75MW2 155 aa14.06□□□□□ -0.16
SNF8-203ENST00000504000 RRM2BQ7LG56 351 aa14.06□□□□□ -0.16
SNF8-203ENST00000504000 TMCO2Q7Z6W1 182 aaPredicted RBP14.06□□□□□ -0.16
SNF8-203ENST00000504000 NLGN4YQ8NFZ3 816 aaPredicted RBP14.06□□□□□ -0.16
SNF8-203ENST00000504000 ANGPTL6Q8NI99 470 aa14.06□□□□□ -0.16
SNF8-203ENST00000504000 ACOT11Q8WXI4 607 aaPredicted RBP14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms