RNA–Protein interactions for RNA: ENST00000503628.5

DDR1-250, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-250ENST00000503628 TRIM3O75382 744 aaPredicted RBP14.41□□□□□ -0.1
DDR1-250ENST00000503628 SASH3O75995 380 aa14.41□□□□□ -0.1
DDR1-250ENST00000503628 FBXO45P0C2W1 286 aa14.41□□□□□ -0.1
DDR1-250ENST00000503628 UROSP10746 265 aa14.41□□□□□ -0.1
DDR1-250ENST00000503628 HTR6P50406 440 aa14.41□□□□□ -0.1
DDR1-250ENST00000503628 FOXA1P55317 472 aa14.41□□□□□ -0.1
DDR1-250ENST00000503628 GALNT1Q10472 559 aaPredicted RBP14.41□□□□□ -0.1
DDR1-250ENST00000503628 CSTF3Q12996 717 aaKnown RBP14.41□□□□□ -0.1
DDR1-250ENST00000503628 ARL13AQ5H913 290 aaPredicted RBP14.41□□□□□ -0.1
DDR1-250ENST00000503628 LUZP2Q86TE4 346 aa14.41□□□□□ -0.1
DDR1-250ENST00000503628 GOLGA6L1Q8N7Z2 621 aa14.41□□□□□ -0.1
DDR1-250ENST00000503628 C9orf106Q8NAJ2 232 aa14.41□□□□□ -0.1
DDR1-250ENST00000503628 PPP1R14CQ8TAE6 165 aa14.41□□□□□ -0.1
DDR1-250ENST00000503628 ATP6V1G3Q96LB4 118 aa14.41□□□□□ -0.1
DDR1-250ENST00000503628 HBEGFQ99075 208 aa14.41□□□□□ -0.1
DDR1-250ENST00000503628 MAPKAP1Q9BPZ7 522 aa14.41□□□□□ -0.1
DDR1-250ENST00000503628 ZNF717Q9BY31 904 aaPredicted RBP14.41□□□□□ -0.1
DDR1-250ENST00000503628 CALHM2Q9HA72 323 aa14.41□□□□□ -0.1
DDR1-250ENST00000503628 EML4Q9HC35 981 aaKnown RBP14.41□□□□□ -0.1
DDR1-250ENST00000503628 LYRM4Q9HD34 91 aa14.41□□□□□ -0.1
DDR1-250ENST00000503628 NMRK1Q9NWW6 199 aa14.41□□□□□ -0.1
DDR1-250ENST00000503628 CHD3Q12873 2000 aaKnown RBP14.41□□□□□ -0.1
DDR1-250ENST00000503628 MED12Q93074 2177 aa14.4□□□□□ -0.1
DDR1-250ENST00000503628 SERTM1A2A2V5 107 aa14.4□□□□□ -0.1
DDR1-250ENST00000503628 HRKO00198 91 aa14.4□□□□□ -0.1
DDR1-250ENST00000503628 ERN1O75460 977 aaKnown RBP14.4□□□□□ -0.1
DDR1-250ENST00000503628 IGKV3-11P04433 115 aa14.4□□□□□ -0.1
DDR1-250ENST00000503628 SERPINE1P05121 402 aa14.4□□□□□ -0.1
DDR1-250ENST00000503628 CHRNGP07510 517 aa14.4□□□□□ -0.1
DDR1-250ENST00000503628 TMIGD3P0DMS9 266 aaPredicted RBP14.4□□□□□ -0.1
DDR1-250ENST00000503628 COX7A2P14406 83 aa14.4□□□□□ -0.1
DDR1-250ENST00000503628 BMP7P18075 431 aa14.4□□□□□ -0.1
DDR1-250ENST00000503628 SERPINB3P29508 390 aa14.4□□□□□ -0.1
DDR1-250ENST00000503628 BSGP35613 385 aa14.4□□□□□ -0.1
DDR1-250ENST00000503628 FOXF2Q12947 444 aa14.4□□□□□ -0.1
DDR1-250ENST00000503628 CHI3L2Q15782 390 aa14.4□□□□□ -0.1
DDR1-250ENST00000503628 TTMPQ5BVD1 217 aa14.4□□□□□ -0.1
DDR1-250ENST00000503628 HHATQ5VTY9 493 aa14.4□□□□□ -0.1
DDR1-250ENST00000503628 DGAT2L6Q6ZPD8 337 aa14.4□□□□□ -0.1
DDR1-250ENST00000503628 OR4N5Q8IXE1 308 aa14.4□□□□□ -0.1
DDR1-250ENST00000503628 METTL4Q8N3J2 472 aa14.4□□□□□ -0.1
DDR1-250ENST00000503628 ZCCHC7Q8N3Z6 543 aaKnown RBP14.4□□□□□ -0.1
DDR1-250ENST00000503628 GBP7Q8N8V2 638 aaPredicted RBP14.4□□□□□ -0.1
DDR1-250ENST00000503628 DOK4Q8TEW6 326 aa14.4□□□□□ -0.1
DDR1-250ENST00000503628 PPWD1Q96BP3 646 aaKnown RBP14.4□□□□□ -0.1
DDR1-250ENST00000503628 PERPQ96FX8 193 aa14.4□□□□□ -0.1
DDR1-250ENST00000503628 WDYHV1Q96HA8 205 aa14.4□□□□□ -0.1
DDR1-250ENST00000503628 ZNF597Q96LX8 424 aa14.4□□□□□ -0.1
DDR1-250ENST00000503628 PAIP2Q9BPZ3 127 aaKnown RBP14.4□□□□□ -0.1
DDR1-250ENST00000503628 MRPL1Q9BYD6 325 aaKnown RBP14.4□□□□□ -0.1
DDR1-250ENST00000503628 ACPTQ9BZG2 426 aa14.4□□□□□ -0.1
DDR1-250ENST00000503628 DDX31Q9H8H2 851 aaKnown RBP14.4□□□□□ -0.1
DDR1-250ENST00000503628 NKIRAS1Q9NYS0 192 aa14.4□□□□□ -0.1
DDR1-250ENST00000503628 AHSPQ9NZD4 102 aa14.4□□□□□ -0.1
DDR1-250ENST00000503628 VPS29Q9UBQ0 182 aa14.4□□□□□ -0.1
DDR1-250ENST00000503628 DSCAMO60469 2012 aa14.4□□□□□ -0.1
DDR1-250ENST00000503628 NBEAL1Q6ZS30 2694 aa14.4□□□□□ -0.1
DDR1-250ENST00000503628 A0A0A6YYD5 115 aa14.39□□□□□ -0.11
DDR1-250ENST00000503628 AZIN1O14977 448 aa14.39□□□□□ -0.11
DDR1-250ENST00000503628 EEDO75530 441 aaKnown RBP14.39□□□□□ -0.11
DDR1-250ENST00000503628 HPNP05981 417 aa14.39□□□□□ -0.11
DDR1-250ENST00000503628 NEFHP12036 1026 aa14.39□□□□□ -0.11
DDR1-250ENST00000503628 CPA2P48052 419 aa14.39□□□□□ -0.11
DDR1-250ENST00000503628 CDK9P50750 372 aaKnown RBP14.39□□□□□ -0.11
DDR1-250ENST00000503628 WDR4P57081 412 aaKnown RBP14.39□□□□□ -0.11
DDR1-250ENST00000503628 SLAMF1Q13291 335 aa14.39□□□□□ -0.11
DDR1-250ENST00000503628 DCST1Q5T197 706 aa14.39□□□□□ -0.11
DDR1-250ENST00000503628 CLEC6AQ6EIG7 209 aa14.39□□□□□ -0.11
DDR1-250ENST00000503628 PAGE2Q7Z2X7 111 aa14.39□□□□□ -0.11
DDR1-250ENST00000503628 NUDT13Q86X67 352 aa14.39□□□□□ -0.11
DDR1-250ENST00000503628 HOMEZQ8IX15 550 aa14.39□□□□□ -0.11
DDR1-250ENST00000503628 DND1Q8IYX4 353 aaKnown RBP14.39□□□□□ -0.11
DDR1-250ENST00000503628 MGARPQ8TDB4 240 aa14.39□□□□□ -0.11
DDR1-250ENST00000503628 DIO2Q92813 273 aa14.39□□□□□ -0.11
DDR1-250ENST00000503628 GNRHR2Q96P88 292 aa14.39□□□□□ -0.11
DDR1-250ENST00000503628 DGAT2Q96PD7 388 aa14.39□□□□□ -0.11
DDR1-250ENST00000503628 UGT2B28Q9BY64 529 aa14.39□□□□□ -0.11
DDR1-250ENST00000503628 C6orf203Q9P0P8 240 aaPredicted RBP14.39□□□□□ -0.11
DDR1-250ENST00000503628 NDRG3Q9UGV2 375 aa14.39□□□□□ -0.11
DDR1-250ENST00000503628 ADAM29Q9UKF5 820 aa14.39□□□□□ -0.11
DDR1-250ENST00000503628 SPACA6W5XKT8 324 aa14.39□□□□□ -0.11
DDR1-250ENST00000503628 MED12LQ86YW9 2145 aa14.39□□□□□ -0.11
DDR1-250ENST00000503628 HEATR5AQ86XA9 2040 aa14.39□□□□□ -0.11
DDR1-250ENST00000503628 ANKRD33BA6NCL7 494 aa14.38□□□□□ -0.11
DDR1-250ENST00000503628 HMGB1P1B2RPK0 211 aaPredicted RBP14.38□□□□□ -0.11
DDR1-250ENST00000503628 TMEM114B3SHH9 223 aa14.38□□□□□ -0.11
DDR1-250ENST00000503628 FGF17O60258 216 aa14.38□□□□□ -0.11
DDR1-250ENST00000503628 CRLF1O75462 422 aa14.38□□□□□ -0.11
DDR1-250ENST00000503628 FGF4P08620 206 aa14.38□□□□□ -0.11
DDR1-250ENST00000503628 CHN1P15882 459 aa14.38□□□□□ -0.11
DDR1-250ENST00000503628 BGNP21810 368 aa14.38□□□□□ -0.11
DDR1-250ENST00000503628 GRK2P25098 689 aa14.38□□□□□ -0.11
DDR1-250ENST00000503628 ARRB2P32121 409 aa14.38□□□□□ -0.11
DDR1-250ENST00000503628 SOX18P35713 384 aa14.38□□□□□ -0.11
DDR1-250ENST00000503628 STT3AP46977 705 aa14.38□□□□□ -0.11
DDR1-250ENST00000503628 NTRK2Q16620 822 aa14.38□□□□□ -0.11
DDR1-250ENST00000503628 EIPR1Q53HC9 387 aa14.38□□□□□ -0.11
DDR1-250ENST00000503628 NHSL2Q5HYW2 709 aa14.38□□□□□ -0.11
DDR1-250ENST00000503628 KANK2Q63ZY3 851 aa14.38□□□□□ -0.11
DDR1-250ENST00000503628 BICRALQ6AI39 1079 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms