RNA–Protein interactions for RNA: ENST00000502820.1

HTT-202, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 287 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-202ENST00000502820 SOCS6O14544 535 aa4.84□□□□□ -1.63
HTT-202ENST00000502820 PRRG2O14669 202 aa4.84□□□□□ -1.63
HTT-202ENST00000502820 TFECO14948 347 aaPredicted RBP4.84□□□□□ -1.63
HTT-202ENST00000502820 RGS10O43665 173 aa4.84□□□□□ -1.63
HTT-202ENST00000502820 CDC40O60508 579 aaKnown RBP eCLIP4.84□□□□□ -1.63
HTT-202ENST00000502820 KCNJ13O60928 360 aa4.84□□□□□ -1.63
HTT-202ENST00000502820 SEC24DO94855 1032 aaPredicted RBP4.84□□□□□ -1.63
HTT-202ENST00000502820 MFN2O95140 757 aa4.84□□□□□ -1.63
HTT-202ENST00000502820 PRAMEF1O95521 474 aa4.84□□□□□ -1.63
HTT-202ENST00000502820 TSPAN12O95859 305 aa4.84□□□□□ -1.63
HTT-202ENST00000502820 C1QBP02746 253 aa4.84□□□□□ -1.63
HTT-202ENST00000502820 TPOP07202 933 aa4.84□□□□□ -1.63
HTT-202ENST00000502820 UMODP07911 640 aa4.84□□□□□ -1.63
HTT-202ENST00000502820 HBQ1P09105 142 aa4.84□□□□□ -1.63
HTT-202ENST00000502820 LBPP18428 481 aa4.84□□□□□ -1.63
HTT-202ENST00000502820 MSH3P20585 1137 aa4.84□□□□□ -1.63
HTT-202ENST00000502820 EFNA1P20827 205 aaPredicted RBP4.84□□□□□ -1.63
HTT-202ENST00000502820 PSMA3P25788 255 aa4.84□□□□□ -1.63
HTT-202ENST00000502820 PTX3P26022 381 aaPredicted RBP4.84□□□□□ -1.63
HTT-202ENST00000502820 ALDH9A1P49189 494 aa4.84□□□□□ -1.63
HTT-202ENST00000502820 CLK1P49759 484 aaKnown RBP4.84□□□□□ -1.63
HTT-202ENST00000502820 TNFSF10P50591 281 aa4.84□□□□□ -1.63
HTT-202ENST00000502820 ARHGDIAP52565 204 aa4.84□□□□□ -1.63
HTT-202ENST00000502820 ZNF140P52738 457 aaPredicted RBP4.84□□□□□ -1.63
HTT-202ENST00000502820 NAGLUP54802 743 aa4.84□□□□□ -1.63
HTT-202ENST00000502820 SLC12A2P55011 1212 aa4.84□□□□□ -1.63
HTT-202ENST00000502820 GP2P55259 537 aaKnown RBP4.84□□□□□ -1.63
HTT-202ENST00000502820 SLC35A2P78381 396 aa4.84□□□□□ -1.63
HTT-202ENST00000502820 NKX6-1P78426 367 aaPredicted RBP4.84□□□□□ -1.63
HTT-202ENST00000502820 ALDH6A1Q02252 535 aaKnown RBP4.84□□□□□ -1.63
HTT-202ENST00000502820 PCDH1Q08174 1060 aa4.84□□□□□ -1.63
HTT-202ENST00000502820 OLIG2Q13516 323 aa4.84□□□□□ -1.63
HTT-202ENST00000502820 AQP6Q13520 282 aa4.84□□□□□ -1.63
HTT-202ENST00000502820 GPR50Q13585 617 aa4.84□□□□□ -1.63
HTT-202ENST00000502820 GTF2H3Q13889 308 aa4.84□□□□□ -1.63
HTT-202ENST00000502820 RCAN2Q14206 197 aa4.84□□□□□ -1.63
HTT-202ENST00000502820 PTPRCAPQ14761 206 aa4.84□□□□□ -1.63
HTT-202ENST00000502820 ACAP2Q15057 778 aa4.84□□□□□ -1.63
HTT-202ENST00000502820 PCOLCEQ15113 449 aa4.84□□□□□ -1.63
HTT-202ENST00000502820 TAF1AQ15573 450 aaPredicted RBP4.84□□□□□ -1.63
HTT-202ENST00000502820 TAB1Q15750 504 aa4.84□□□□□ -1.63
HTT-202ENST00000502820 PGS1Q32NB8 556 aa4.84□□□□□ -1.63
HTT-202ENST00000502820 ZNF658BQ4V348 819 aaPredicted RBP4.84□□□□□ -1.63
HTT-202ENST00000502820 BCL7AQ4VC05 210 aa4.84□□□□□ -1.63
HTT-202ENST00000502820 LDLRAP1Q5SW96 308 aa4.84□□□□□ -1.63
HTT-202ENST00000502820 STEAP3Q658P3 488 aa4.84□□□□□ -1.63
HTT-202ENST00000502820 ZNF324BQ6AW86 544 aaPredicted RBP4.84□□□□□ -1.63
HTT-202ENST00000502820 ZNF470Q6ECI4 717 aa4.84□□□□□ -1.63
HTT-202ENST00000502820 CAPN13Q6MZZ7 669 aaPredicted RBP4.84□□□□□ -1.63
HTT-202ENST00000502820 RPUSD3Q6P087 351 aaKnown RBP4.84□□□□□ -1.63
HTT-202ENST00000502820 CCBE1Q6UXH8 406 aaPredicted RBP4.84□□□□□ -1.63
HTT-202ENST00000502820 CYP2R1Q6VVX0 501 aa4.84□□□□□ -1.63
HTT-202ENST00000502820 FAM83HQ6ZRV2 1179 aaPredicted RBP4.84□□□□□ -1.63
HTT-202ENST00000502820 GK5Q6ZS86 529 aa4.84□□□□□ -1.63
HTT-202ENST00000502820 LARP4Q71RC2 724 aaKnown RBP eCLIP4.84□□□□□ -1.63
HTT-202ENST00000502820 ASPGQ86U10 573 aa4.84□□□□□ -1.63
HTT-202ENST00000502820 AMZ2Q86W34 360 aa4.84□□□□□ -1.63
HTT-202ENST00000502820 CCDC71Q8IV32 467 aaPredicted RBP4.84□□□□□ -1.63
HTT-202ENST00000502820 P3H2Q8IVL5 708 aa4.84□□□□□ -1.63
HTT-202ENST00000502820 FAM9CQ8IZT9 166 aa4.84□□□□□ -1.63
HTT-202ENST00000502820 CIARTQ8N365 385 aaPredicted RBP4.84□□□□□ -1.63
HTT-202ENST00000502820 DPP10Q8N608 796 aa4.84□□□□□ -1.63
HTT-202ENST00000502820 METTL27Q8N6F8 245 aaPredicted RBP4.84□□□□□ -1.63
HTT-202ENST00000502820 PSD4Q8NDX1 1056 aa4.84□□□□□ -1.63
HTT-202ENST00000502820 IL17RDQ8NFM7 739 aa4.84□□□□□ -1.63
HTT-202ENST00000502820 OR4K2Q8NGD2 314 aa4.84□□□□□ -1.63
HTT-202ENST00000502820 OR10Q1Q8NGQ4 319 aa4.84□□□□□ -1.63
HTT-202ENST00000502820 OR5K1Q8NHB7 308 aa4.84□□□□□ -1.63
HTT-202ENST00000502820 BRIX1Q8TDN6 353 aaKnown RBP4.84□□□□□ -1.63
HTT-202ENST00000502820 DNAJA4Q8WW22 397 aaPredicted RBP4.84□□□□□ -1.63
HTT-202ENST00000502820 C8orf44Q96CB5 159 aa4.84□□□□□ -1.63
HTT-202ENST00000502820 LRRC58Q96CX6 371 aa4.84□□□□□ -1.63
HTT-202ENST00000502820 LGALS12Q96DT0 336 aa4.84□□□□□ -1.63
HTT-202ENST00000502820 SCYL1Q96KG9 808 aa4.84□□□□□ -1.63
HTT-202ENST00000502820 EGLN2Q96KS0 407 aa4.84□□□□□ -1.63
HTT-202ENST00000502820 LINC00615Q96LM1 132 aaPredicted RBP4.84□□□□□ -1.63
HTT-202ENST00000502820 MUS81Q96NY9 551 aa4.84□□□□□ -1.63
HTT-202ENST00000502820 CSF3RQ99062 836 aa4.84□□□□□ -1.63
HTT-202ENST00000502820 CD180Q99467 661 aa4.84□□□□□ -1.63
HTT-202ENST00000502820 DPH2Q9BQC3 489 aaPredicted RBP4.84□□□□□ -1.63
HTT-202ENST00000502820 FICDQ9BVA6 458 aa4.84□□□□□ -1.63
HTT-202ENST00000502820 ZCCHC2Q9C0B9 1178 aaKnown RBP4.84□□□□□ -1.63
HTT-202ENST00000502820 NAA50Q9GZZ1 169 aaKnown RBP4.84□□□□□ -1.63
HTT-202ENST00000502820 SLC22A4Q9H015 551 aa4.84□□□□□ -1.63
HTT-202ENST00000502820 RAB33BQ9H082 229 aa4.84□□□□□ -1.63
HTT-202ENST00000502820 PCDHAC1Q9H158 963 aa4.84□□□□□ -1.63
HTT-202ENST00000502820 NEUROD4Q9HD90 331 aa4.84□□□□□ -1.63
HTT-202ENST00000502820 NPDC1Q9NQX5 325 aaPredicted RBP4.84□□□□□ -1.63
HTT-202ENST00000502820 FAM118AQ9NWS6 357 aa4.84□□□□□ -1.63
HTT-202ENST00000502820 ANKRD10Q9NXR5 420 aa4.84□□□□□ -1.63
HTT-202ENST00000502820 ING3Q9NXR8 418 aa4.84□□□□□ -1.63
HTT-202ENST00000502820 TAS2R9Q9NYW1 312 aa4.84□□□□□ -1.63
HTT-202ENST00000502820 ABI3Q9P2A4 366 aa4.84□□□□□ -1.63
HTT-202ENST00000502820 RABL2AQ9UBK7 228 aaPredicted RBP4.84□□□□□ -1.63
HTT-202ENST00000502820 SEC14L4Q9UDX3 406 aa4.84□□□□□ -1.63
HTT-202ENST00000502820 ZDHHC2Q9UIJ5 367 aa4.84□□□□□ -1.63
HTT-202ENST00000502820 MAPRE3Q9UPY8 281 aa4.84□□□□□ -1.63
HTT-202ENST00000502820 AAR2Q9Y312 384 aaKnown RBP4.84□□□□□ -1.63
HTT-202ENST00000502820 MRPS2Q9Y399 296 aaKnown RBP4.84□□□□□ -1.63
HTT-202ENST00000502820 PCDHA9Q9Y5H5 950 aa4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms