RNA–Protein interactions for RNA: ENST00000502818.5

CPNE4-202, Transcript of copine 4, humanhuman

TSL 5 BASIC

Gene CPNE4, Length 2,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-202ENST00000502818 PHOX2BQ99453 314 aa6.82□□□□□ -1.32
CPNE4-202ENST00000502818 CD180Q99467 661 aa6.82□□□□□ -1.32
CPNE4-202ENST00000502818 CTRCQ99895 268 aa6.82□□□□□ -1.32
CPNE4-202ENST00000502818 TREX2Q9BQ50 279 aaPredicted RBP6.82□□□□□ -1.32
CPNE4-202ENST00000502818 DOHHQ9BU89 302 aa6.82□□□□□ -1.32
CPNE4-202ENST00000502818 DUSP23Q9BVJ7 150 aa6.82□□□□□ -1.32
CPNE4-202ENST00000502818 AMBRA1Q9C0C7 1298 aa6.82□□□□□ -1.32
CPNE4-202ENST00000502818 ZNF768Q9H5H4 540 aaKnown RBP6.82□□□□□ -1.32
CPNE4-202ENST00000502818 AKIRIN1Q9H9L7 192 aaPredicted RBP6.82□□□□□ -1.32
CPNE4-202ENST00000502818 IL1RAPQ9NPH3 570 aa6.82□□□□□ -1.32
CPNE4-202ENST00000502818 LANCL2Q9NS86 450 aa6.82□□□□□ -1.32
CPNE4-202ENST00000502818 SEMA3GQ9NS98 782 aa6.82□□□□□ -1.32
CPNE4-202ENST00000502818 FGF21Q9NSA1 209 aa6.82□□□□□ -1.32
CPNE4-202ENST00000502818 GIMAP4Q9NUV9 329 aa6.82□□□□□ -1.32
CPNE4-202ENST00000502818 OCIAD1Q9NX40 245 aa6.82□□□□□ -1.32
CPNE4-202ENST00000502818 MS4A12Q9NXJ0 267 aa6.82□□□□□ -1.32
CPNE4-202ENST00000502818 NDUFAF4Q9P032 175 aa6.82□□□□□ -1.32
CPNE4-202ENST00000502818 RHCGQ9UBD6 479 aa6.82□□□□□ -1.32
CPNE4-202ENST00000502818 ZNF639Q9UID6 485 aa6.82□□□□□ -1.32
CPNE4-202ENST00000502818 SAMD4AQ9UPU9 718 aaKnown RBP6.82□□□□□ -1.32
CPNE4-202ENST00000502818 B3GNT3Q9Y2A9 372 aa6.82□□□□□ -1.32
CPNE4-202ENST00000502818 CHST2Q9Y4C5 530 aa6.82□□□□□ -1.32
CPNE4-202ENST00000502818 ADAMTS20P59510 1910 aa6.82□□□□□ -1.32
CPNE4-202ENST00000502818 CCDC88CQ9P219 2028 aa6.82□□□□□ -1.32
CPNE4-202ENST00000502818 NPIPA5A0A0B4J1W7 369 aa6.82□□□□□ -1.32
CPNE4-202ENST00000502818 GXYLT2A0PJZ3 443 aa6.82□□□□□ -1.32
CPNE4-202ENST00000502818 FAM181BA6NEQ2 426 aa6.82□□□□□ -1.32
CPNE4-202ENST00000502818 A8MUA0 341 aa6.82□□□□□ -1.32
CPNE4-202ENST00000502818 NPIPA7E9PJI5 369 aa6.82□□□□□ -1.32
CPNE4-202ENST00000502818 FFAR1O14842 300 aa6.82□□□□□ -1.32
CPNE4-202ENST00000502818 FRS3O43559 492 aa6.82□□□□□ -1.32
CPNE4-202ENST00000502818 CNOT3O75175 753 aaKnown RBP6.82□□□□□ -1.32
CPNE4-202ENST00000502818 SULT1C4O75897 302 aa6.82□□□□□ -1.32
CPNE4-202ENST00000502818 RASAL1O95294 804 aa6.82□□□□□ -1.32
CPNE4-202ENST00000502818 SNAP29O95721 258 aa6.82□□□□□ -1.32
CPNE4-202ENST00000502818 ATP1B1P05026 303 aa6.82□□□□□ -1.32
CPNE4-202ENST00000502818 NPIPA8P0DM63 369 aa6.82□□□□□ -1.32
CPNE4-202ENST00000502818 NR2F1P10589 423 aa6.82□□□□□ -1.32
CPNE4-202ENST00000502818 CKMT1AP12532 417 aa6.82□□□□□ -1.32
CPNE4-202ENST00000502818 RNH1P13489 461 aaKnown RBP6.82□□□□□ -1.32
CPNE4-202ENST00000502818 ZNF10P21506 573 aaPredicted RBP6.82□□□□□ -1.32
CPNE4-202ENST00000502818 CHRNEQ04844 493 aa6.82□□□□□ -1.32
CPNE4-202ENST00000502818 RBBP4Q09028 425 aa6.82□□□□□ -1.32
CPNE4-202ENST00000502818 INAQ16352 499 aa6.82□□□□□ -1.32
CPNE4-202ENST00000502818 MOGQ16653 247 aa6.82□□□□□ -1.32
CPNE4-202ENST00000502818 ZNF528Q3MIS6 628 aa6.82□□□□□ -1.32
CPNE4-202ENST00000502818 KCTD21Q4G0X4 260 aa6.82□□□□□ -1.32
CPNE4-202ENST00000502818 NHSL2Q5HYW2 709 aa6.82□□□□□ -1.32
CPNE4-202ENST00000502818 STK32CQ86UX6 486 aa6.82□□□□□ -1.32
CPNE4-202ENST00000502818 CLVS1Q8IUQ0 354 aaPredicted RBP6.82□□□□□ -1.32
CPNE4-202ENST00000502818 EID3Q8N140 333 aa6.82□□□□□ -1.32
CPNE4-202ENST00000502818 OR4N2Q8NGD1 307 aa6.82□□□□□ -1.32
CPNE4-202ENST00000502818 ZNF420Q8TAQ5 688 aaPredicted RBP6.82□□□□□ -1.32
CPNE4-202ENST00000502818 TBC1D15Q8TC07 691 aa6.82□□□□□ -1.32
CPNE4-202ENST00000502818 SFXN5Q8TD22 340 aa6.82□□□□□ -1.32
CPNE4-202ENST00000502818 SLC9A6Q92581 669 aa6.82□□□□□ -1.32
CPNE4-202ENST00000502818 EFHD2Q96C19 240 aaPredicted RBP6.82□□□□□ -1.32
CPNE4-202ENST00000502818 C12orf43Q96C57 262 aaKnown RBP6.82□□□□□ -1.32
CPNE4-202ENST00000502818 RMND5BQ96G75 393 aaPredicted RBP6.82□□□□□ -1.32
CPNE4-202ENST00000502818 FBXL20Q96IG2 436 aa6.82□□□□□ -1.32
CPNE4-202ENST00000502818 COL21A1Q96P44 957 aa6.82□□□□□ -1.32
CPNE4-202ENST00000502818 DOK1Q99704 481 aa6.82□□□□□ -1.32
CPNE4-202ENST00000502818 SPATA9Q9BWV2 254 aa6.82□□□□□ -1.32
CPNE4-202ENST00000502818 NPLQ9BXD5 320 aaPredicted RBP6.82□□□□□ -1.32
CPNE4-202ENST00000502818 ALOXE3Q9BYJ1 711 aa6.82□□□□□ -1.32
CPNE4-202ENST00000502818 CHRNA10Q9GZZ6 450 aa6.82□□□□□ -1.32
CPNE4-202ENST00000502818 MAGIXQ9H6Y5 334 aa6.82□□□□□ -1.32
CPNE4-202ENST00000502818 CLK4Q9HAZ1 481 aaKnown RBP6.82□□□□□ -1.32
CPNE4-202ENST00000502818 GIN1Q9NXP7 522 aa6.82□□□□□ -1.32
CPNE4-202ENST00000502818 DNAJB9Q9UBS3 223 aa6.82□□□□□ -1.32
CPNE4-202ENST00000502818 CTSFQ9UBX1 484 aa6.82□□□□□ -1.32
CPNE4-202ENST00000502818 PSME2Q9UL46 239 aa6.82□□□□□ -1.32
CPNE4-202ENST00000502818 GPR55Q9Y2T6 319 aaPredicted RBP6.82□□□□□ -1.32
CPNE4-202ENST00000502818 A0A087WXM4 84 aa6.81□□□□□ -1.32
CPNE4-202ENST00000502818 TRIM64BA6NI03 449 aa6.81□□□□□ -1.32
CPNE4-202ENST00000502818 M0R3H8 397 aa6.81□□□□□ -1.32
CPNE4-202ENST00000502818 CDX4O14627 284 aaPredicted RBP6.81□□□□□ -1.32
CPNE4-202ENST00000502818 BCAS1O75363 584 aaPredicted RBP6.81□□□□□ -1.32
CPNE4-202ENST00000502818 CPNE6O95741 557 aa6.81□□□□□ -1.32
CPNE4-202ENST00000502818 OXSR1O95747 527 aaPredicted RBP6.81□□□□□ -1.32
CPNE4-202ENST00000502818 CER1O95813 267 aa6.81□□□□□ -1.32
CPNE4-202ENST00000502818 CLPSP04118 112 aa6.81□□□□□ -1.32
CPNE4-202ENST00000502818 FABP3P05413 133 aa6.81□□□□□ -1.32
CPNE4-202ENST00000502818 PNLIPP16233 465 aa6.81□□□□□ -1.32
CPNE4-202ENST00000502818 TTKP33981 857 aa6.81□□□□□ -1.32
CPNE4-202ENST00000502818 CNR2P34972 360 aa6.81□□□□□ -1.32
CPNE4-202ENST00000502818 LSM11P83369 360 aaKnown RBP eCLIP6.81□□□□□ -1.32
CPNE4-202ENST00000502818 DAB2P98082 770 aa6.81□□□□□ -1.32
CPNE4-202ENST00000502818 HOXC5Q00444 222 aa6.81□□□□□ -1.32
CPNE4-202ENST00000502818 GANABQ14697 944 aaKnown RBP6.81□□□□□ -1.32
CPNE4-202ENST00000502818 GRM7Q14831 915 aa6.81□□□□□ -1.32
CPNE4-202ENST00000502818 NNATQ16517 81 aa6.81□□□□□ -1.32
CPNE4-202ENST00000502818 NDUFA9Q16795 377 aa6.81□□□□□ -1.32
CPNE4-202ENST00000502818 GPAT3Q53EU6 434 aa6.81□□□□□ -1.32
CPNE4-202ENST00000502818 TCTE1Q5JU00 501 aa6.81□□□□□ -1.32
CPNE4-202ENST00000502818 PLA2G2CQ5R387 149 aa6.81□□□□□ -1.32
CPNE4-202ENST00000502818 KRTAP5-3Q6L8H2 238 aa6.81□□□□□ -1.32
CPNE4-202ENST00000502818 PWWP2BQ6NUJ5 590 aa6.81□□□□□ -1.32
CPNE4-202ENST00000502818 COX15Q7KZN9 410 aa6.81□□□□□ -1.32
CPNE4-202ENST00000502818 NANOGNBQ7Z5D8 188 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms