RNA–Protein interactions for RNA: ENST00000502802.1

HMGB1P3-201, Transcript of high mobility group box 1 pseudogene 3, humanhuman

BASIC

Gene HMGB1P3, Length 616 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P3-201ENST00000502802 TMEM181Q9P2C4 612 aa4.46□□□□□ -1.7
HMGB1P3-201ENST00000502802 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP4.46□□□□□ -1.7
HMGB1P3-201ENST00000502802 NIP7Q9Y221 180 aaKnown RBP eCLIP4.46□□□□□ -1.7
HMGB1P3-201ENST00000502802 SLC9A8Q9Y2E8 581 aa4.46□□□□□ -1.7
HMGB1P3-201ENST00000502802 MRPS7Q9Y2R9 242 aaKnown RBP4.46□□□□□ -1.7
HMGB1P3-201ENST00000502802 MED14O60244 1454 aa4.45□□□□□ -1.7
HMGB1P3-201ENST00000502802 NLRP1Q9C000 1473 aa4.45□□□□□ -1.7
HMGB1P3-201ENST00000502802 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP4.45□□□□□ -1.7
HMGB1P3-201ENST00000502802 A0A087X002 238 aa4.45□□□□□ -1.7
HMGB1P3-201ENST00000502802 TTC26A0AVF1 554 aa4.45□□□□□ -1.7
HMGB1P3-201ENST00000502802 MPTX1A8MV57 137 aa4.45□□□□□ -1.7
HMGB1P3-201ENST00000502802 H0YL77 283 aa4.45□□□□□ -1.7
HMGB1P3-201ENST00000502802 TRAFD1O14545 582 aaPredicted RBP4.45□□□□□ -1.7
HMGB1P3-201ENST00000502802 CYB561D2O14569 222 aa4.45□□□□□ -1.7
HMGB1P3-201ENST00000502802 EI24O14681 340 aa4.45□□□□□ -1.7
HMGB1P3-201ENST00000502802 ALOX15BO15296 676 aa4.45□□□□□ -1.7
HMGB1P3-201ENST00000502802 CSF2P04141 144 aa4.45□□□□□ -1.7
HMGB1P3-201ENST00000502802 GSTT2P0CG29 244 aa4.45□□□□□ -1.7
HMGB1P3-201ENST00000502802 GSTT2BP0CG30 244 aa4.45□□□□□ -1.7
HMGB1P3-201ENST00000502802 PDHBP11177 359 aa4.45□□□□□ -1.7
HMGB1P3-201ENST00000502802 GLRA2P23416 452 aa4.45□□□□□ -1.7
HMGB1P3-201ENST00000502802 HTR5AP47898 357 aa4.45□□□□□ -1.7
HMGB1P3-201ENST00000502802 PGFP49763 221 aa4.45□□□□□ -1.7
HMGB1P3-201ENST00000502802 MRPS6P82932 125 aaKnown RBP4.45□□□□□ -1.7
HMGB1P3-201ENST00000502802 SPIBQ01892 262 aa4.45□□□□□ -1.7
HMGB1P3-201ENST00000502802 FASTKQ14296 549 aaKnown RBP4.45□□□□□ -1.7
HMGB1P3-201ENST00000502802 EMC2Q15006 297 aa4.45□□□□□ -1.7
HMGB1P3-201ENST00000502802 PDK4Q16654 411 aa4.45□□□□□ -1.7
HMGB1P3-201ENST00000502802 CDKN3Q16667 212 aa4.45□□□□□ -1.7
HMGB1P3-201ENST00000502802 CCDC57Q2TAC2 916 aa4.45□□□□□ -1.7
HMGB1P3-201ENST00000502802 LRRC23Q53EV4 343 aaPredicted RBP4.45□□□□□ -1.7
HMGB1P3-201ENST00000502802 CEP55Q53EZ4 464 aa4.45□□□□□ -1.7
HMGB1P3-201ENST00000502802 SPATA46Q5T0L3 261 aa4.45□□□□□ -1.7
HMGB1P3-201ENST00000502802 ATRAIDQ6UW56 229 aa4.45□□□□□ -1.7
HMGB1P3-201ENST00000502802 ZNF562Q6V9R5 426 aa4.45□□□□□ -1.7
HMGB1P3-201ENST00000502802 NOTCH2NLQ7Z3S9 236 aa4.45□□□□□ -1.7
HMGB1P3-201ENST00000502802 NET1Q7Z628 596 aaPredicted RBP4.45□□□□□ -1.7
HMGB1P3-201ENST00000502802 LUZP1Q86V48 1076 aa4.45□□□□□ -1.7
HMGB1P3-201ENST00000502802 EFCAB13Q8IY85 973 aa4.45□□□□□ -1.7
HMGB1P3-201ENST00000502802 FAM133AQ8N9E0 248 aa4.45□□□□□ -1.7
HMGB1P3-201ENST00000502802 C9orf106Q8NAJ2 232 aa4.45□□□□□ -1.7
HMGB1P3-201ENST00000502802 NAP1L5Q96NT1 182 aaPredicted RBP4.45□□□□□ -1.7
HMGB1P3-201ENST00000502802 ZSCAN5AQ9BUG6 496 aa4.45□□□□□ -1.7
HMGB1P3-201ENST00000502802 KRTAP4-7Q9BYR0 210 aa4.45□□□□□ -1.7
HMGB1P3-201ENST00000502802 NT5DC2Q9H857 520 aa4.45□□□□□ -1.7
HMGB1P3-201ENST00000502802 WDR41Q9HAD4 459 aa4.45□□□□□ -1.7
HMGB1P3-201ENST00000502802 FGF22Q9HCT0 170 aa4.45□□□□□ -1.7
HMGB1P3-201ENST00000502802 EIF3KQ9UBQ5 218 aaKnown RBP4.45□□□□□ -1.7
HMGB1P3-201ENST00000502802 GHRLQ9UBU3 117 aa4.45□□□□□ -1.7
HMGB1P3-201ENST00000502802 PURGQ9UJV8 347 aaKnown RBP4.45□□□□□ -1.7
HMGB1P3-201ENST00000502802 RABL2BQ9UNT1 228 aa4.45□□□□□ -1.7
HMGB1P3-201ENST00000502802 ALKQ9UM73 1620 aa4.45□□□□□ -1.7
HMGB1P3-201ENST00000502802 DUOX2Q9NRD8 1548 aa4.45□□□□□ -1.7
HMGB1P3-201ENST00000502802 ERVK-7P63135 1459 aa4.44□□□□□ -1.7
HMGB1P3-201ENST00000502802 SHANK2Q9UPX8 1470 aa4.44□□□□□ -1.7
HMGB1P3-201ENST00000502802 PIK3C2BO00750 1634 aa4.44□□□□□ -1.7
HMGB1P3-201ENST00000502802 NPIPA5A0A0B4J1W7 369 aa4.44□□□□□ -1.7
HMGB1P3-201ENST00000502802 IGHV3-38A0A0C4DH36 116 aa4.44□□□□□ -1.7
HMGB1P3-201ENST00000502802 TRBV5-4A0A0C4DH59 114 aa4.44□□□□□ -1.7
HMGB1P3-201ENST00000502802 A0A0J9YVX5 310 aa4.44□□□□□ -1.7
HMGB1P3-201ENST00000502802 IGLON5A6NGN9 336 aa4.44□□□□□ -1.7
HMGB1P3-201ENST00000502802 A8MUI8 341 aa4.44□□□□□ -1.7
HMGB1P3-201ENST00000502802 NPIPA5E9PKD4 350 aa4.44□□□□□ -1.7
HMGB1P3-201ENST00000502802 IMPA2O14732 288 aa4.44□□□□□ -1.7
HMGB1P3-201ENST00000502802 JAK2O60674 1132 aa4.44□□□□□ -1.7
HMGB1P3-201ENST00000502802 HMMRO75330 724 aa4.44□□□□□ -1.7
HMGB1P3-201ENST00000502802 ZFAND5O76080 213 aa4.44□□□□□ -1.7
HMGB1P3-201ENST00000502802 RHOBTB1O94844 696 aa4.44□□□□□ -1.7
HMGB1P3-201ENST00000502802 ANP32DO95626 131 aa4.44□□□□□ -1.7
HMGB1P3-201ENST00000502802 IGLV1-44P01699 117 aa4.44□□□□□ -1.7
HMGB1P3-201ENST00000502802 CHRNA1P02708 482 aa4.44□□□□□ -1.7
HMGB1P3-201ENST00000502802 UQCRBP14927 111 aa4.44□□□□□ -1.7
HMGB1P3-201ENST00000502802 RPA2P15927 270 aa4.44□□□□□ -1.7
HMGB1P3-201ENST00000502802 RFC2P35250 354 aa4.44□□□□□ -1.7
HMGB1P3-201ENST00000502802 CYLC1P35663 651 aaPredicted RBP4.44□□□□□ -1.7
HMGB1P3-201ENST00000502802 ACADVLP49748 655 aa4.44□□□□□ -1.7
HMGB1P3-201ENST00000502802 CHIT1Q13231 466 aa4.44□□□□□ -1.7
HMGB1P3-201ENST00000502802 GPM6BQ13491 265 aa4.44□□□□□ -1.7
HMGB1P3-201ENST00000502802 CCDC152Q4G0S7 254 aa4.44□□□□□ -1.7
HMGB1P3-201ENST00000502802 UNC50Q53HI1 259 aa4.44□□□□□ -1.7
HMGB1P3-201ENST00000502802 BEND6Q5SZJ8 279 aaPredicted RBP4.44□□□□□ -1.7
HMGB1P3-201ENST00000502802 LEG1Q6P5S2 330 aa4.44□□□□□ -1.7
HMGB1P3-201ENST00000502802 KCNMB4Q86W47 210 aa4.44□□□□□ -1.7
HMGB1P3-201ENST00000502802 KLHDC8BQ8IXV7 354 aa4.44□□□□□ -1.7
HMGB1P3-201ENST00000502802 DLX4Q92988 240 aaPredicted RBP4.44□□□□□ -1.7
HMGB1P3-201ENST00000502802 ATXN7L3BQ96GX2 97 aa4.44□□□□□ -1.7
HMGB1P3-201ENST00000502802 RCHY1Q96PM5 261 aa4.44□□□□□ -1.7
HMGB1P3-201ENST00000502802 C19orf43Q9BQ61 176 aa4.44□□□□□ -1.7
HMGB1P3-201ENST00000502802 GPR174Q9BXC1 333 aa4.44□□□□□ -1.7
HMGB1P3-201ENST00000502802 GORASP2Q9H8Y8 452 aa4.44□□□□□ -1.7
HMGB1P3-201ENST00000502802 FAM114A2Q9NRY5 505 aa4.44□□□□□ -1.7
HMGB1P3-201ENST00000502802 KLRF1Q9NZS2 232 aa4.44□□□□□ -1.7
HMGB1P3-201ENST00000502802 THYN1Q9P016 225 aa4.44□□□□□ -1.7
HMGB1P3-201ENST00000502802 MBD2Q9UBB5 411 aa4.44□□□□□ -1.7
HMGB1P3-201ENST00000502802 EMCNQ9ULC0 261 aa4.44□□□□□ -1.7
HMGB1P3-201ENST00000502802 RRP15Q9Y3B9 282 aaKnown RBP4.44□□□□□ -1.7
HMGB1P3-201ENST00000502802 CPS1P31327 1500 aa4.44□□□□□ -1.7
HMGB1P3-201ENST00000502802 PRDM15P57071 1507 aaPredicted RBP4.44□□□□□ -1.7
HMGB1P3-201ENST00000502802 ABCC5O15440 1437 aa4.44□□□□□ -1.7
HMGB1P3-201ENST00000502802 KDM5AP29375 1690 aaKnown RBP4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms