RNA–Protein interactions for RNA: ENST00000502717.5

HMGXB3-201, Transcript of HMG-box containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HMGXB3, Length 4,974 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-201ENST00000502717 GFRA2O00451 464 aa16.32■□□□□ 0.2
HMGXB3-201ENST00000502717 GJB5O95377 273 aa16.32■□□□□ 0.2
HMGXB3-201ENST00000502717 GPX2P18283 190 aa16.32■□□□□ 0.2
HMGXB3-201ENST00000502717 TACR1P25103 407 aa16.32■□□□□ 0.2
HMGXB3-201ENST00000502717 S100A2P29034 98 aa16.32■□□□□ 0.2
HMGXB3-201ENST00000502717 TIGD3Q6B0B8 471 aa16.32■□□□□ 0.2
HMGXB3-201ENST00000502717 TRAM1L1Q8N609 369 aa16.32■□□□□ 0.2
HMGXB3-201ENST00000502717 ALG8Q9BVK2 526 aa16.32■□□□□ 0.2
HMGXB3-201ENST00000502717 EMC7Q9NPA0 242 aa16.32■□□□□ 0.2
HMGXB3-201ENST00000502717 NAALAD2Q9Y3Q0 740 aa16.32■□□□□ 0.2
HMGXB3-201ENST00000502717 OAZ2O95190 189 aa16.32■□□□□ 0.2
HMGXB3-201ENST00000502717 C8orf89P0DMQ9 161 aa16.32■□□□□ 0.2
HMGXB3-201ENST00000502717 PTBP1P26599 531 aaKnown RBP eCLIP16.32■□□□□ 0.2
HMGXB3-201ENST00000502717 TEKQ02763 1124 aa16.32■□□□□ 0.2
HMGXB3-201ENST00000502717 GAS6Q14393 721 aa16.32■□□□□ 0.2
HMGXB3-201ENST00000502717 PUM1Q14671 1186 aaKnown RBP eCLIP16.32■□□□□ 0.2
HMGXB3-201ENST00000502717 GGTA1PQ4G0N0 100 aa16.32■□□□□ 0.2
HMGXB3-201ENST00000502717 OR8S1Q8NH09 359 aa16.32■□□□□ 0.2
HMGXB3-201ENST00000502717 SPRYD4Q8WW59 207 aaPredicted RBP16.32■□□□□ 0.2
HMGXB3-201ENST00000502717 TTTY10Q9BZA0 68 aa16.32■□□□□ 0.2
HMGXB3-201ENST00000502717 METTL8Q9H825 291 aaKnown RBP16.32■□□□□ 0.2
HMGXB3-201ENST00000502717 M0QZQ0 153 aa16.32■□□□□ 0.2
HMGXB3-201ENST00000502717 NUDT7P0C024 238 aa16.32■□□□□ 0.2
HMGXB3-201ENST00000502717 GIPRP48546 466 aa16.32■□□□□ 0.2
HMGXB3-201ENST00000502717 RPS26P11Q5JNZ5 115 aaPredicted RBP16.32■□□□□ 0.2
HMGXB3-201ENST00000502717 C3orf38Q5JPI3 329 aa16.32■□□□□ 0.2
HMGXB3-201ENST00000502717 ELP2Q6IA86 826 aa16.32■□□□□ 0.2
HMGXB3-201ENST00000502717 PLBD1Q6P4A8 553 aa16.32■□□□□ 0.2
HMGXB3-201ENST00000502717 LTB4R2Q9NPC1 389 aa16.32■□□□□ 0.2
HMGXB3-201ENST00000502717 MBLAC1A4D2B0 266 aaPredicted RBP16.31■□□□□ 0.2
HMGXB3-201ENST00000502717 GPR4P46093 362 aa16.31■□□□□ 0.2
HMGXB3-201ENST00000502717 LRRC37A5PQ49AS3 106 aa16.31■□□□□ 0.2
HMGXB3-201ENST00000502717 LRIF1Q5T3J3 769 aa16.31■□□□□ 0.2
HMGXB3-201ENST00000502717 OR56B4Q8NH76 319 aa16.31■□□□□ 0.2
HMGXB3-201ENST00000502717 SNIP1Q8TAD8 396 aaKnown RBP16.31■□□□□ 0.2
HMGXB3-201ENST00000502717 TMEM163Q8TC26 289 aa16.31■□□□□ 0.2
HMGXB3-201ENST00000502717 SORCS1Q8WY21 1168 aa16.31■□□□□ 0.2
HMGXB3-201ENST00000502717 DHRS9Q9BPW9 319 aa16.31■□□□□ 0.2
HMGXB3-201ENST00000502717 NTN4Q9HB63 628 aa16.31■□□□□ 0.2
HMGXB3-201ENST00000502717 ABI3Q9P2A4 366 aa16.31■□□□□ 0.2
HMGXB3-201ENST00000502717 GJD2Q9UKL4 321 aa16.31■□□□□ 0.2
HMGXB3-201ENST00000502717 EMC8O43402 210 aa16.31■□□□□ 0.2
HMGXB3-201ENST00000502717 GASTP01350 101 aa16.31■□□□□ 0.2
HMGXB3-201ENST00000502717 DRD2P14416 443 aa16.31■□□□□ 0.2
HMGXB3-201ENST00000502717 ARRB1P49407 418 aaPredicted RBP16.31■□□□□ 0.2
HMGXB3-201ENST00000502717 CLPPQ16740 277 aaPredicted RBP16.31■□□□□ 0.2
HMGXB3-201ENST00000502717 TOR1AIP1Q5JTV8 583 aa16.31■□□□□ 0.2
HMGXB3-201ENST00000502717 RFPL4BQ6ZWI9 263 aa16.31■□□□□ 0.2
HMGXB3-201ENST00000502717 SLC39A13Q96H72 371 aa16.31■□□□□ 0.2
HMGXB3-201ENST00000502717 NECTIN4Q96NY8 510 aa16.31■□□□□ 0.2
HMGXB3-201ENST00000502717 C17orf62Q9BQA9 187 aa16.31■□□□□ 0.2
HMGXB3-201ENST00000502717 KCNK12Q9HB15 430 aa16.31■□□□□ 0.2
HMGXB3-201ENST00000502717 OR6C2Q9NZP2 312 aa16.31■□□□□ 0.2
HMGXB3-201ENST00000502717 A0A0G2JMP0 313 aa16.31■□□□□ 0.2
HMGXB3-201ENST00000502717 GIMD1P0DJR0 217 aa16.31■□□□□ 0.2
HMGXB3-201ENST00000502717 ZNF823P16415 610 aa16.31■□□□□ 0.2
HMGXB3-201ENST00000502717 HOXC13P31276 330 aa16.31■□□□□ 0.2
HMGXB3-201ENST00000502717 EOGTQ5NDL2 527 aa16.31■□□□□ 0.2
HMGXB3-201ENST00000502717 ZNF551Q7Z340 670 aaPredicted RBP16.31■□□□□ 0.2
HMGXB3-201ENST00000502717 CCDC116Q8IYX3 515 aa16.31■□□□□ 0.2
HMGXB3-201ENST00000502717 OR4M2Q8NGB6 313 aa16.31■□□□□ 0.2
HMGXB3-201ENST00000502717 OR5W2Q8NH69 310 aa16.31■□□□□ 0.2
HMGXB3-201ENST00000502717 SLIRPQ9GZT3 109 aaKnown RBP16.31■□□□□ 0.2
HMGXB3-201ENST00000502717 ZNF350Q9GZX5 532 aa16.31■□□□□ 0.2
HMGXB3-201ENST00000502717 SAP130Q9H0E3 1048 aa16.31■□□□□ 0.2
HMGXB3-201ENST00000502717 GABRQQ9UN88 632 aa16.31■□□□□ 0.2
HMGXB3-201ENST00000502717 RASD1Q9Y272 281 aa16.31■□□□□ 0.2
HMGXB3-201ENST00000502717 FARSAQ9Y285 508 aaKnown RBP16.31■□□□□ 0.2
HMGXB3-201ENST00000502717 ILKQ13418 452 aa16.31■□□□□ 0.2
HMGXB3-201ENST00000502717 FCN2Q15485 313 aa16.31■□□□□ 0.2
HMGXB3-201ENST00000502717 LRRTM4Q86VH4 590 aa16.31■□□□□ 0.2
HMGXB3-201ENST00000502717 ANGPTL6Q8NI99 470 aa16.31■□□□□ 0.2
HMGXB3-201ENST00000502717 TRIB2Q92519 343 aa16.31■□□□□ 0.2
HMGXB3-201ENST00000502717 GLYATL1Q969I3 302 aa16.31■□□□□ 0.2
HMGXB3-201ENST00000502717 GALNT9Q9HCQ5 603 aa16.31■□□□□ 0.2
HMGXB3-201ENST00000502717 CACNG3O60359 315 aa16.3■□□□□ 0.2
HMGXB3-201ENST00000502717 ZNF780AO75290 641 aaPredicted RBP16.3■□□□□ 0.2
HMGXB3-201ENST00000502717 ZNF14P17017 642 aaPredicted RBP16.3■□□□□ 0.2
HMGXB3-201ENST00000502717 MRPS10P82664 201 aaKnown RBP16.3■□□□□ 0.2
HMGXB3-201ENST00000502717 TXNDC8Q6A555 127 aa16.3■□□□□ 0.2
HMGXB3-201ENST00000502717 KCTD9Q7L273 389 aa16.3■□□□□ 0.2
HMGXB3-201ENST00000502717 CPOQ8IVL8 374 aa16.3■□□□□ 0.2
HMGXB3-201ENST00000502717 SLC22A15Q8IZD6 547 aa16.3■□□□□ 0.2
HMGXB3-201ENST00000502717 OTUB2Q96DC9 234 aa16.3■□□□□ 0.2
HMGXB3-201ENST00000502717 ACTL7AQ9Y615 435 aa16.3■□□□□ 0.2
HMGXB3-201ENST00000502717 CITO14578 2027 aa16.3■□□□□ 0.2
HMGXB3-201ENST00000502717 SLX4Q8IY92 1834 aa16.3■□□□□ 0.2
HMGXB3-201ENST00000502717 GLOD5A6NK44 160 aa16.3■□□□□ 0.2
HMGXB3-201ENST00000502717 F5H5P2 479 aa16.3■□□□□ 0.2
HMGXB3-201ENST00000502717 CSO75390 466 aaKnown RBP16.3■□□□□ 0.2
HMGXB3-201ENST00000502717 CD3GP09693 182 aa16.3■□□□□ 0.2
HMGXB3-201ENST00000502717 M6PRP20645 277 aa16.3■□□□□ 0.2
HMGXB3-201ENST00000502717 CEBPGP53567 150 aa16.3■□□□□ 0.2
HMGXB3-201ENST00000502717 RAP2BP61225 183 aa16.3■□□□□ 0.2
HMGXB3-201ENST00000502717 BTG1P62324 171 aa16.3■□□□□ 0.2
HMGXB3-201ENST00000502717 IDO2Q6ZQW0 420 aa16.3■□□□□ 0.2
HMGXB3-201ENST00000502717 TPRA1Q86W33 373 aa16.3■□□□□ 0.2
HMGXB3-201ENST00000502717 PARGQ86W56 976 aa16.3■□□□□ 0.2
HMGXB3-201ENST00000502717 FBXO15Q8NCQ5 510 aaPredicted RBP16.3■□□□□ 0.2
HMGXB3-201ENST00000502717 UBTD2Q8WUN7 234 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 87.7 ms