RNA–Protein interactions for RNA: ENST00000498540.2

TRAF4-212, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 748 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-212ENST00000498540 DRD5P21918 477 aa13.27□□□□□ -0.29
TRAF4-212ENST00000498540 ARL1P40616 181 aaPredicted RBP13.27□□□□□ -0.29
TRAF4-212ENST00000498540 PPICP45877 212 aa13.27□□□□□ -0.29
TRAF4-212ENST00000498540 MAPK12P53778 367 aa13.27□□□□□ -0.29
TRAF4-212ENST00000498540 B3GALT5-AS1P59052 145 aa13.27□□□□□ -0.29
TRAF4-212ENST00000498540 MRPS35P82673 323 aaKnown RBP13.27□□□□□ -0.29
TRAF4-212ENST00000498540 KRTAP1-1Q07627 177 aa13.27□□□□□ -0.29
TRAF4-212ENST00000498540 OR2A2Q6IF42 318 aa13.27□□□□□ -0.29
TRAF4-212ENST00000498540 UBQLNLQ8IYU4 475 aa13.27□□□□□ -0.29
TRAF4-212ENST00000498540 FIG4Q92562 907 aa13.27□□□□□ -0.29
TRAF4-212ENST00000498540 TMCO6Q96DC7 493 aa13.27□□□□□ -0.29
TRAF4-212ENST00000498540 COL21A1Q96P44 957 aa13.27□□□□□ -0.29
TRAF4-212ENST00000498540 DPH5Q9H2P9 285 aa13.27□□□□□ -0.29
TRAF4-212ENST00000498540 NOL11Q9H8H0 719 aaKnown RBP13.27□□□□□ -0.29
TRAF4-212ENST00000498540 ANKRA2Q9H9E1 313 aa13.27□□□□□ -0.29
TRAF4-212ENST00000498540 ACOT9Q9Y305 439 aa13.27□□□□□ -0.29
TRAF4-212ENST00000498540 C1orf226A1L170 272 aa13.26□□□□□ -0.29
TRAF4-212ENST00000498540 H0YC42 278 aa13.26□□□□□ -0.29
TRAF4-212ENST00000498540 C16orf97H3BN30 126 aa13.26□□□□□ -0.29
TRAF4-212ENST00000498540 CCDC188H7C350 402 aa13.26□□□□□ -0.29
TRAF4-212ENST00000498540 EIF3HO15372 352 aaKnown RBP eCLIP13.26□□□□□ -0.29
TRAF4-212ENST00000498540 NME6O75414 186 aaPredicted RBP13.26□□□□□ -0.29
TRAF4-212ENST00000498540 REM1O75628 298 aa13.26□□□□□ -0.29
TRAF4-212ENST00000498540 CGAP01215 116 aa13.26□□□□□ -0.29
TRAF4-212ENST00000498540 CSNK2A2P19784 350 aaPredicted RBP13.26□□□□□ -0.29
TRAF4-212ENST00000498540 GRK2P25098 689 aa13.26□□□□□ -0.29
TRAF4-212ENST00000498540 DPP4P27487 766 aa13.26□□□□□ -0.29
TRAF4-212ENST00000498540 DEKP35659 375 aaKnown RBP13.26□□□□□ -0.29
TRAF4-212ENST00000498540 KCNJ5P48544 419 aa13.26□□□□□ -0.29
TRAF4-212ENST00000498540 TPD52P55327 224 aaPredicted RBP13.26□□□□□ -0.29
TRAF4-212ENST00000498540 CLDN15P56746 228 aa13.26□□□□□ -0.29
TRAF4-212ENST00000498540 CORO7P57737 925 aa13.26□□□□□ -0.29
TRAF4-212ENST00000498540 FRG2Q64ET8 278 aa13.26□□□□□ -0.29
TRAF4-212ENST00000498540 ANKRD34AQ69YU3 496 aa13.26□□□□□ -0.29
TRAF4-212ENST00000498540 PAGE2Q7Z2X7 111 aa13.26□□□□□ -0.29
TRAF4-212ENST00000498540 COMMD6Q7Z4G1 85 aa13.26□□□□□ -0.29
TRAF4-212ENST00000498540 METTL4Q8N3J2 472 aa13.26□□□□□ -0.29
TRAF4-212ENST00000498540 KLHL29Q96CT2 875 aa13.26□□□□□ -0.29
TRAF4-212ENST00000498540 SLC35A4Q96G79 324 aa13.26□□□□□ -0.29
TRAF4-212ENST00000498540 ZNF845Q96IR2 970 aaPredicted RBP13.26□□□□□ -0.29
TRAF4-212ENST00000498540 FRG2BQ96QU4 278 aa13.26□□□□□ -0.29
TRAF4-212ENST00000498540 ADOQ96SZ5 270 aa13.26□□□□□ -0.29
TRAF4-212ENST00000498540 ELOVL5Q9NYP7 299 aa13.26□□□□□ -0.29
TRAF4-212ENST00000498540 CPSF2Q9P2I0 782 aaKnown RBP13.26□□□□□ -0.29
TRAF4-212ENST00000498540 PRODH2Q9UF12 536 aa13.26□□□□□ -0.29
TRAF4-212ENST00000498540 GPR55Q9Y2T6 319 aaPredicted RBP13.26□□□□□ -0.29
TRAF4-212ENST00000498540 MRPS18CQ9Y3D5 142 aaKnown RBP13.26□□□□□ -0.29
TRAF4-212ENST00000498540 A0A087X1B8 175 aa13.25□□□□□ -0.29
TRAF4-212ENST00000498540 TSPAN2O60636 221 aa13.25□□□□□ -0.29
TRAF4-212ENST00000498540 CRLF1O75462 422 aa13.25□□□□□ -0.29
TRAF4-212ENST00000498540 C2P06681 752 aa13.25□□□□□ -0.29
TRAF4-212ENST00000498540 GSTA2P09210 222 aa13.25□□□□□ -0.29
TRAF4-212ENST00000498540 GAS1P54826 345 aa13.25□□□□□ -0.29
TRAF4-212ENST00000498540 CAPRIN1Q14444 709 aaKnown RBP13.25□□□□□ -0.29
TRAF4-212ENST00000498540 BCL2A1Q16548 175 aa13.25□□□□□ -0.29
TRAF4-212ENST00000498540 FAM83EQ2M2I3 478 aa13.25□□□□□ -0.29
TRAF4-212ENST00000498540 FAM219BQ5XKK7 198 aa13.25□□□□□ -0.29
TRAF4-212ENST00000498540 PLEKHM3Q6ZWE6 761 aa13.25□□□□□ -0.29
TRAF4-212ENST00000498540 CHMP1BQ7LBR1 199 aa13.25□□□□□ -0.29
TRAF4-212ENST00000498540 ZNF610Q8N9Z0 462 aa13.25□□□□□ -0.29
TRAF4-212ENST00000498540 FBF1Q8TES7 1133 aa13.25□□□□□ -0.29
TRAF4-212ENST00000498540 RNF138Q8WVD3 245 aa13.25□□□□□ -0.29
TRAF4-212ENST00000498540 CNRIP1Q96F85 164 aaPredicted RBP13.25□□□□□ -0.29
TRAF4-212ENST00000498540 ZNF681Q96N22 645 aa13.25□□□□□ -0.29
TRAF4-212ENST00000498540 GPR78Q96P69 363 aa13.25□□□□□ -0.29
TRAF4-212ENST00000498540 BTBD9Q96Q07 612 aa13.25□□□□□ -0.29
TRAF4-212ENST00000498540 SLC39A3Q9BRY0 314 aa13.25□□□□□ -0.29
TRAF4-212ENST00000498540 LRRC1Q9BTT6 524 aa13.25□□□□□ -0.29
TRAF4-212ENST00000498540 GRHL1Q9NZI5 618 aa13.25□□□□□ -0.29
TRAF4-212ENST00000498540 TNPO3Q9Y5L0 923 aaKnown RBP13.25□□□□□ -0.29
TRAF4-212ENST00000498540 PCNX3Q9H6A9 2034 aa13.24□□□□□ -0.29
TRAF4-212ENST00000498540 HMX2A2RU54 273 aa13.24□□□□□ -0.29
TRAF4-212ENST00000498540 ZSCAN12O43309 604 aa13.24□□□□□ -0.29
TRAF4-212ENST00000498540 EMC8O43402 210 aa13.24□□□□□ -0.29
TRAF4-212ENST00000498540 ABCB7O75027 752 aa13.24□□□□□ -0.29
TRAF4-212ENST00000498540 THBDP07204 575 aa13.24□□□□□ -0.29
TRAF4-212ENST00000498540 CT45A8P0DMV1 189 aa13.24□□□□□ -0.29
TRAF4-212ENST00000498540 CT45A9P0DMV2 189 aa13.24□□□□□ -0.29
TRAF4-212ENST00000498540 CD8BP10966 210 aa13.24□□□□□ -0.29
TRAF4-212ENST00000498540 PEPDP12955 493 aa13.24□□□□□ -0.29
TRAF4-212ENST00000498540 PAX1P15863 534 aa13.24□□□□□ -0.29
TRAF4-212ENST00000498540 CCNG1P51959 295 aa13.24□□□□□ -0.29
TRAF4-212ENST00000498540 SUCLG1P53597 346 aaKnown RBP13.24□□□□□ -0.29
TRAF4-212ENST00000498540 NR1H2P55055 460 aa13.24□□□□□ -0.29
TRAF4-212ENST00000498540 GALNT1Q10472 559 aaPredicted RBP13.24□□□□□ -0.29
TRAF4-212ENST00000498540 TRAF3Q13114 568 aa13.24□□□□□ -0.29
TRAF4-212ENST00000498540 CALCOCO2Q13137 446 aa13.24□□□□□ -0.29
TRAF4-212ENST00000498540 ACAP2Q15057 778 aa13.24□□□□□ -0.29
TRAF4-212ENST00000498540 CT45A2Q5DJT8 189 aa13.24□□□□□ -0.29
TRAF4-212ENST00000498540 SGO1Q5FBB7 561 aa13.24□□□□□ -0.29
TRAF4-212ENST00000498540 TTC19Q6DKK2 380 aaPredicted RBP13.24□□□□□ -0.29
TRAF4-212ENST00000498540 NPSR1Q6W5P4 371 aa13.24□□□□□ -0.29
TRAF4-212ENST00000498540 PTGR2Q8N8N7 351 aaPredicted RBP13.24□□□□□ -0.29
TRAF4-212ENST00000498540 OR4K17Q8NGC6 315 aa13.24□□□□□ -0.29
TRAF4-212ENST00000498540 FNDC9Q8TBE3 224 aa13.24□□□□□ -0.29
TRAF4-212ENST00000498540 TRPC4APQ8TEL6 797 aa13.24□□□□□ -0.29
TRAF4-212ENST00000498540 ATP6V1E2Q96A05 226 aa13.24□□□□□ -0.29
TRAF4-212ENST00000498540 TM4SF18Q96CE8 201 aa13.24□□□□□ -0.29
TRAF4-212ENST00000498540 DTNBP1Q96EV8 351 aa13.24□□□□□ -0.29
TRAF4-212ENST00000498540 NSUN5Q96P11 429 aaKnown RBP13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms