RNA–Protein interactions for RNA: ENST00000498534.5

CNOT4-211, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 2

Gene CNOT4, Length 481 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-211ENST00000498534 VPS13CQ709C8 3753 aa10.93□□□□□ -0.66
CNOT4-211ENST00000498534 FRG2CA6NGY1 282 aa10.92□□□□□ -0.66
CNOT4-211ENST00000498534 A8MXE2 369 aa10.92□□□□□ -0.66
CNOT4-211ENST00000498534 PLOD2O00469 737 aa10.92□□□□□ -0.66
CNOT4-211ENST00000498534 CBX7O95931 251 aa10.92□□□□□ -0.66
CNOT4-211ENST00000498534 KRT6AP02538 564 aa10.92□□□□□ -0.66
CNOT4-211ENST00000498534 KRT6BP04259 564 aa10.92□□□□□ -0.66
CNOT4-211ENST00000498534 PCSK2P16519 638 aa10.92□□□□□ -0.66
CNOT4-211ENST00000498534 SRD5A2P31213 254 aa10.92□□□□□ -0.66
CNOT4-211ENST00000498534 SOX18P35713 384 aa10.92□□□□□ -0.66
CNOT4-211ENST00000498534 PTGDSP41222 190 aa10.92□□□□□ -0.66
CNOT4-211ENST00000498534 KRT6CP48668 564 aa10.92□□□□□ -0.66
CNOT4-211ENST00000498534 STARP49675 285 aa10.92□□□□□ -0.66
CNOT4-211ENST00000498534 EMDP50402 254 aa10.92□□□□□ -0.66
CNOT4-211ENST00000498534 CDH13P55290 713 aa10.92□□□□□ -0.66
CNOT4-211ENST00000498534 GFRA1P56159 465 aa10.92□□□□□ -0.66
CNOT4-211ENST00000498534 PSPHP78330 225 aa10.92□□□□□ -0.66
CNOT4-211ENST00000498534 NKX6-1P78426 367 aaPredicted RBP10.92□□□□□ -0.66
CNOT4-211ENST00000498534 MRPS22P82650 360 aaKnown RBP10.92□□□□□ -0.66
CNOT4-211ENST00000498534 LTBQ06643 244 aa10.92□□□□□ -0.66
CNOT4-211ENST00000498534 GALNT1Q10472 559 aaPredicted RBP10.92□□□□□ -0.66
CNOT4-211ENST00000498534 POU4F3Q15319 338 aa10.92□□□□□ -0.66
CNOT4-211ENST00000498534 BCL2A1Q16548 175 aa10.92□□□□□ -0.66
CNOT4-211ENST00000498534 ERCC6LQ2NKX8 1250 aa10.92□□□□□ -0.66
CNOT4-211ENST00000498534 SHEQ5VZ18 495 aa10.92□□□□□ -0.66
CNOT4-211ENST00000498534 OR2A2Q6IF42 318 aa10.92□□□□□ -0.66
CNOT4-211ENST00000498534 P4HA3Q7Z4N8 544 aa10.92□□□□□ -0.66
CNOT4-211ENST00000498534 ADGRE4PQ86SQ3 457 aa10.92□□□□□ -0.66
CNOT4-211ENST00000498534 GRAMD2AQ8IUY3 354 aa10.92□□□□□ -0.66
CNOT4-211ENST00000498534 CCDC116Q8IYX3 515 aa10.92□□□□□ -0.66
CNOT4-211ENST00000498534 GCNT2Q8N0V5 402 aa10.92□□□□□ -0.66
CNOT4-211ENST00000498534 C1orf52Q8N6N3 182 aaKnown RBP10.92□□□□□ -0.66
CNOT4-211ENST00000498534 SIMC1Q8NDZ2 872 aa10.92□□□□□ -0.66
CNOT4-211ENST00000498534 ERP27Q96DN0 273 aa10.92□□□□□ -0.66
CNOT4-211ENST00000498534 CNRIP1Q96F85 164 aaPredicted RBP10.92□□□□□ -0.66
CNOT4-211ENST00000498534 ZNF681Q96N22 645 aa10.92□□□□□ -0.66
CNOT4-211ENST00000498534 SFXN2Q96NB2 322 aa10.92□□□□□ -0.66
CNOT4-211ENST00000498534 ADOQ96SZ5 270 aa10.92□□□□□ -0.66
CNOT4-211ENST00000498534 MRPL46Q9H2W6 279 aaKnown RBP10.92□□□□□ -0.66
CNOT4-211ENST00000498534 GIMAP4Q9NUV9 329 aa10.92□□□□□ -0.66
CNOT4-211ENST00000498534 XPR1Q9UBH6 696 aa10.92□□□□□ -0.66
CNOT4-211ENST00000498534 DKKL1Q9UK85 242 aa10.92□□□□□ -0.66
CNOT4-211ENST00000498534 PACSIN3Q9UKS6 424 aa10.92□□□□□ -0.66
CNOT4-211ENST00000498534 NFU1Q9UMS0 254 aa10.92□□□□□ -0.66
CNOT4-211ENST00000498534 DLGAP4Q9Y2H0 992 aa10.92□□□□□ -0.66
CNOT4-211ENST00000498534 EXPH5Q8NEV8 1989 aa10.92□□□□□ -0.66
CNOT4-211ENST00000498534 ESYT3A0FGR9 886 aa10.91□□□□□ -0.66
CNOT4-211ENST00000498534 FAM171A2A8MVW0 826 aa10.91□□□□□ -0.66
CNOT4-211ENST00000498534 MSTNO14793 375 aa10.91□□□□□ -0.66
CNOT4-211ENST00000498534 CRHP06850 196 aa10.91□□□□□ -0.66
CNOT4-211ENST00000498534 INHBBP09529 407 aa10.91□□□□□ -0.66
CNOT4-211ENST00000498534 CD53P19397 219 aa10.91□□□□□ -0.66
CNOT4-211ENST00000498534 DPP4P27487 766 aa10.91□□□□□ -0.66
CNOT4-211ENST00000498534 IL12BP29460 328 aa10.91□□□□□ -0.66
CNOT4-211ENST00000498534 MPIP34949 423 aa10.91□□□□□ -0.66
CNOT4-211ENST00000498534 LHX2P50458 406 aa10.91□□□□□ -0.66
CNOT4-211ENST00000498534 ETF1P62495 437 aaKnown RBP10.91□□□□□ -0.66
CNOT4-211ENST00000498534 MRPS35P82673 323 aaKnown RBP10.91□□□□□ -0.66
CNOT4-211ENST00000498534 LTB4RQ15722 352 aa10.91□□□□□ -0.66
CNOT4-211ENST00000498534 TEX35Q5T0J7 233 aa10.91□□□□□ -0.66
CNOT4-211ENST00000498534 OR5M10Q6IEU7 315 aa10.91□□□□□ -0.66
CNOT4-211ENST00000498534 C8orf74Q6P047 294 aa10.91□□□□□ -0.66
CNOT4-211ENST00000498534 FAM180BQ6P0A1 224 aa10.91□□□□□ -0.66
CNOT4-211ENST00000498534 LETMD1Q6P1Q0 360 aa10.91□□□□□ -0.66
CNOT4-211ENST00000498534 LARP4Q71RC2 724 aaKnown RBP eCLIP10.91□□□□□ -0.667e-7■■■■■ 35.5
CNOT4-211ENST00000498534 P3H2Q8IVL5 708 aa10.91□□□□□ -0.66
CNOT4-211ENST00000498534 GBP7Q8N8V2 638 aaPredicted RBP10.91□□□□□ -0.66
CNOT4-211ENST00000498534 ZNF675Q8TD23 568 aa10.91□□□□□ -0.66
CNOT4-211ENST00000498534 ZNF483Q8TF39 744 aaPredicted RBP10.91□□□□□ -0.66
CNOT4-211ENST00000498534 SLC35A4Q96G79 324 aa10.91□□□□□ -0.66
CNOT4-211ENST00000498534 ZDHHC18Q9NUE0 388 aa10.91□□□□□ -0.66
CNOT4-211ENST00000498534 NINJ2Q9NZG7 142 aa10.91□□□□□ -0.66
CNOT4-211ENST00000498534 TRPS1Q9UHF7 1281 aa10.91□□□□□ -0.66
CNOT4-211ENST00000498534 WIF1Q9Y5W5 379 aa10.91□□□□□ -0.66
CNOT4-211ENST00000498534 MED12LQ86YW9 2145 aa10.9□□□□□ -0.66
CNOT4-211ENST00000498534 GNG14A0A1W2PPG7 69 aa10.9□□□□□ -0.66
CNOT4-211ENST00000498534 PPP6CO00743 305 aa10.9□□□□□ -0.66
CNOT4-211ENST00000498534 ZIC3O60481 467 aa10.9□□□□□ -0.66
CNOT4-211ENST00000498534 ULK1O75385 1050 aa10.9□□□□□ -0.66
CNOT4-211ENST00000498534 SMNDC1O75940 238 aaKnown RBP eCLIP10.9□□□□□ -0.66
CNOT4-211ENST00000498534 OR4F21O95013 312 aa10.9□□□□□ -0.66
CNOT4-211ENST00000498534 RPS17P08708 135 aaKnown RBP10.9□□□□□ -0.66
CNOT4-211ENST00000498534 CT45A8P0DMV1 189 aa10.9□□□□□ -0.66
CNOT4-211ENST00000498534 CT45A9P0DMV2 189 aa10.9□□□□□ -0.66
CNOT4-211ENST00000498534 PEPDP12955 493 aa10.9□□□□□ -0.66
CNOT4-211ENST00000498534 HSD3B1P14060 373 aa10.9□□□□□ -0.66
CNOT4-211ENST00000498534 ZNF708P17019 499 aa10.9□□□□□ -0.66
CNOT4-211ENST00000498534 TSPAN8P19075 237 aa10.9□□□□□ -0.66
CNOT4-211ENST00000498534 TAC1P20366 129 aa10.9□□□□□ -0.66
CNOT4-211ENST00000498534 HSD3B2P26439 372 aa10.9□□□□□ -0.66
CNOT4-211ENST00000498534 CPOXP36551 454 aa10.9□□□□□ -0.66
CNOT4-211ENST00000498534 HSD17B3P37058 310 aa10.9□□□□□ -0.66
CNOT4-211ENST00000498534 MAGEA12P43365 314 aa10.9□□□□□ -0.66
CNOT4-211ENST00000498534 PNLIPRP2P54317 469 aa10.9□□□□□ -0.66
CNOT4-211ENST00000498534 EEFSECP57772 596 aaKnown RBP10.9□□□□□ -0.66
CNOT4-211ENST00000498534 CLCQ05315 142 aa10.9□□□□□ -0.66
CNOT4-211ENST00000498534 DUSP2Q05923 314 aa10.9□□□□□ -0.66
CNOT4-211ENST00000498534 CKAP4Q07065 602 aaKnown RBP10.9□□□□□ -0.66
CNOT4-211ENST00000498534 HEPACAMQ14CZ8 416 aa10.9□□□□□ -0.66
CNOT4-211ENST00000498534 CT45A2Q5DJT8 189 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms