RNA–Protein interactions for RNA: ENST00000498466.1

CCDC58-207, Transcript of coiled-coil domain containing 58, humanhuman

TSL 2

Gene CCDC58, Length 683 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-207ENST00000498466 SYCE1LA8MT33 242 aa12.56□□□□□ -0.4
CCDC58-207ENST00000498466 ZIC3O60481 467 aa12.56□□□□□ -0.4
CCDC58-207ENST00000498466 UGDHO60701 494 aa12.56□□□□□ -0.4
CCDC58-207ENST00000498466 TMCC2O75069 709 aa12.56□□□□□ -0.4
CCDC58-207ENST00000498466 ERAL1O75616 437 aaKnown RBP12.56□□□□□ -0.4
CCDC58-207ENST00000498466 SOX30O94993 753 aa12.56□□□□□ -0.4
CCDC58-207ENST00000498466 SEMA3DO95025 777 aa12.56□□□□□ -0.4
CCDC58-207ENST00000498466 ATP1B1P05026 303 aa12.56□□□□□ -0.4
CCDC58-207ENST00000498466 LTA4HP09960 611 aaKnown RBP12.56□□□□□ -0.4
CCDC58-207ENST00000498466 GFAPP14136 432 aa12.56□□□□□ -0.4
CCDC58-207ENST00000498466 DRD5P21918 477 aa12.56□□□□□ -0.4
CCDC58-207ENST00000498466 GRK2P25098 689 aa12.56□□□□□ -0.4
CCDC58-207ENST00000498466 ARL1P40616 181 aaPredicted RBP12.56□□□□□ -0.4
CCDC58-207ENST00000498466 PPICP45877 212 aa12.56□□□□□ -0.4
CCDC58-207ENST00000498466 EEFSECP57772 596 aaKnown RBP12.56□□□□□ -0.4
CCDC58-207ENST00000498466 GPX6P59796 221 aa12.56□□□□□ -0.4
CCDC58-207ENST00000498466 MGAT2Q10469 447 aa12.56□□□□□ -0.4
CCDC58-207ENST00000498466 FGFBP1Q14512 234 aa12.56□□□□□ -0.4
CCDC58-207ENST00000498466 SLMAPQ14BN4 828 aa12.56□□□□□ -0.4
CCDC58-207ENST00000498466 PFKFB4Q16877 469 aa12.56□□□□□ -0.4
CCDC58-207ENST00000498466 CCNYL2Q5T2Q4 361 aa12.56□□□□□ -0.4
CCDC58-207ENST00000498466 C10orf62Q5T681 223 aaPredicted RBP12.56□□□□□ -0.4
CCDC58-207ENST00000498466 SH2D5Q6ZV89 423 aa12.56□□□□□ -0.4
CCDC58-207ENST00000498466 CMC1Q7Z7K0 106 aa12.56□□□□□ -0.4
CCDC58-207ENST00000498466 SLC35F6Q8N357 371 aa12.56□□□□□ -0.4
CCDC58-207ENST00000498466 OR4K17Q8NGC6 315 aa12.56□□□□□ -0.4
CCDC58-207ENST00000498466 PYROXD1Q8WU10 500 aa12.56□□□□□ -0.4
CCDC58-207ENST00000498466 ADOQ96SZ5 270 aa12.56□□□□□ -0.4
CCDC58-207ENST00000498466 PINK1Q9BXM7 581 aa12.56□□□□□ -0.4
CCDC58-207ENST00000498466 IPPKQ9H8X2 491 aa12.56□□□□□ -0.4
CCDC58-207ENST00000498466 RNF122Q9H9V4 155 aa12.56□□□□□ -0.4
CCDC58-207ENST00000498466 ZNF639Q9UID6 485 aa12.56□□□□□ -0.4
CCDC58-207ENST00000498466 RNF11Q9Y3C5 154 aa12.56□□□□□ -0.4
CCDC58-207ENST00000498466 RAI1Q7Z5J4 1906 aaPredicted RBP12.56□□□□□ -0.4
CCDC58-207ENST00000498466 A0A087X1B8 175 aa12.55□□□□□ -0.4
CCDC58-207ENST00000498466 H0YC42 278 aa12.55□□□□□ -0.4
CCDC58-207ENST00000498466 HS3ST1O14792 307 aa12.55□□□□□ -0.4
CCDC58-207ENST00000498466 TO15178 435 aa12.55□□□□□ -0.4
CCDC58-207ENST00000498466 TP73O15350 636 aa12.55□□□□□ -0.4
CCDC58-207ENST00000498466 SEC14L5O43304 696 aa12.55□□□□□ -0.4
CCDC58-207ENST00000498466 KLF4O43474 513 aa12.55□□□□□ -0.4
CCDC58-207ENST00000498466 CBX7O95931 251 aa12.55□□□□□ -0.4
CCDC58-207ENST00000498466 PLAUP00749 431 aa12.55□□□□□ -0.4
CCDC58-207ENST00000498466 THBDP07204 575 aa12.55□□□□□ -0.4
CCDC58-207ENST00000498466 MTHFD2P13995 350 aa12.55□□□□□ -0.4
CCDC58-207ENST00000498466 CSNK2A2P19784 350 aaPredicted RBP12.55□□□□□ -0.4
CCDC58-207ENST00000498466 IL12BP29460 328 aa12.55□□□□□ -0.4
CCDC58-207ENST00000498466 SPRP35270 261 aaPredicted RBP12.55□□□□□ -0.4
CCDC58-207ENST00000498466 KRT20P35900 424 aa12.55□□□□□ -0.4
CCDC58-207ENST00000498466 MAPK12P53778 367 aa12.55□□□□□ -0.4
CCDC58-207ENST00000498466 TPD52P55327 224 aaPredicted RBP12.55□□□□□ -0.4
CCDC58-207ENST00000498466 DSCR4P56555 118 aaPredicted RBP12.55□□□□□ -0.4
CCDC58-207ENST00000498466 B3GALT5-AS1P59052 145 aa12.55□□□□□ -0.4
CCDC58-207ENST00000498466 GTF2H2Q13888 395 aa12.55□□□□□ -0.4
CCDC58-207ENST00000498466 TRMT12Q53H54 448 aaKnown RBP12.55□□□□□ -0.4
CCDC58-207ENST00000498466 RAET1LQ5VY80 246 aa12.55□□□□□ -0.4
CCDC58-207ENST00000498466 SLC48A1Q6P1K1 146 aa12.55□□□□□ -0.4
CCDC58-207ENST00000498466 GTF2H2CQ6P1K8 395 aa12.55□□□□□ -0.4
CCDC58-207ENST00000498466 PAGE2Q7Z2X7 111 aa12.55□□□□□ -0.4
CCDC58-207ENST00000498466 GOLGA7Q7Z5G4 137 aa12.55□□□□□ -0.4
CCDC58-207ENST00000498466 CTAGE3PQ8IX95 158 aa12.55□□□□□ -0.4
CCDC58-207ENST00000498466 ZNF611Q8N823 705 aa12.55□□□□□ -0.4
CCDC58-207ENST00000498466 GBP7Q8N8V2 638 aaPredicted RBP12.55□□□□□ -0.4
CCDC58-207ENST00000498466 FNDC9Q8TBE3 224 aa12.55□□□□□ -0.4
CCDC58-207ENST00000498466 SLC35A4Q96G79 324 aa12.55□□□□□ -0.4
CCDC58-207ENST00000498466 PLPPR2Q96GM1 343 aa12.55□□□□□ -0.4
CCDC58-207ENST00000498466 MRPL1Q9BYD6 325 aaKnown RBP12.55□□□□□ -0.4
CCDC58-207ENST00000498466 AHSPQ9NZD4 102 aa12.55□□□□□ -0.4
CCDC58-207ENST00000498466 LAMP3Q9UQV4 416 aa12.55□□□□□ -0.4
CCDC58-207ENST00000498466 PCDHA9Q9Y5H5 950 aa12.55□□□□□ -0.4
CCDC58-207ENST00000498466 TCRBV9S1A1TA0A576 114 aa12.54□□□□□ -0.4
CCDC58-207ENST00000498466 C1orf226A1L170 272 aa12.54□□□□□ -0.4
CCDC58-207ENST00000498466 GUCY1B2O75343 617 aa12.54□□□□□ -0.4
CCDC58-207ENST00000498466 TNFRSF21O75509 655 aa12.54□□□□□ -0.4
CCDC58-207ENST00000498466 CLDN9O95484 217 aa12.54□□□□□ -0.4
CCDC58-207ENST00000498466 PPP3CBP16298 524 aa12.54□□□□□ -0.4
CCDC58-207ENST00000498466 PCSK2P16519 638 aa12.54□□□□□ -0.4
CCDC58-207ENST00000498466 CRABP2P29373 138 aa12.54□□□□□ -0.4
CCDC58-207ENST00000498466 EMDP50402 254 aa12.54□□□□□ -0.4
CCDC58-207ENST00000498466 CLDN15P56746 228 aa12.54□□□□□ -0.4
CCDC58-207ENST00000498466 RPS4XP62701 263 aaKnown RBP12.54□□□□□ -0.4
CCDC58-207ENST00000498466 MRPS35P82673 323 aaKnown RBP12.54□□□□□ -0.4
CCDC58-207ENST00000498466 EFR3AQ14156 821 aa12.54□□□□□ -0.4
CCDC58-207ENST00000498466 PON3Q15166 354 aa12.54□□□□□ -0.4
CCDC58-207ENST00000498466 LTB4RQ15722 352 aa12.54□□□□□ -0.4
CCDC58-207ENST00000498466 GRTP1Q5TC63 336 aa12.54□□□□□ -0.4
CCDC58-207ENST00000498466 FAM180BQ6P0A1 224 aa12.54□□□□□ -0.4
CCDC58-207ENST00000498466 HIPK1Q86Z02 1210 aa12.54□□□□□ -0.4
CCDC58-207ENST00000498466 L3MBTL4Q8NA19 623 aa12.54□□□□□ -0.4
CCDC58-207ENST00000498466 ATP6V1E2Q96A05 226 aa12.54□□□□□ -0.4
CCDC58-207ENST00000498466 NXNL1Q96CM4 212 aa12.54□□□□□ -0.4
CCDC58-207ENST00000498466 KLHL29Q96CT2 875 aa12.54□□□□□ -0.4
CCDC58-207ENST00000498466 CDK15Q96Q40 435 aa12.54□□□□□ -0.4
CCDC58-207ENST00000498466 LRRC1Q9BTT6 524 aa12.54□□□□□ -0.4
CCDC58-207ENST00000498466 REG4Q9BYZ8 158 aa12.54□□□□□ -0.4
CCDC58-207ENST00000498466 YAE1D1Q9NRH1 226 aa12.54□□□□□ -0.4
CCDC58-207ENST00000498466 PPP4R1LQ9P1A2 415 aa12.54□□□□□ -0.4
CCDC58-207ENST00000498466 ADAM29Q9UKF5 820 aa12.54□□□□□ -0.4
CCDC58-207ENST00000498466 CES1P1Q9UKY3 287 aa12.54□□□□□ -0.4
CCDC58-207ENST00000498466 PSME2Q9UL46 239 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms