RNA–Protein interactions for RNA: ENST00000498090.1

AFF3-215, Transcript of AF4/FMR2 family member 3, humanhuman

TSL 2

Gene AFF3, Length 1,673 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFF3-215ENST00000498090 CSNK1G2P78368 415 aa11.68□□□□□ -0.54
AFF3-215ENST00000498090 SLC13A2Q13183 592 aa11.68□□□□□ -0.54
AFF3-215ENST00000498090 NFATC4Q14934 902 aa11.68□□□□□ -0.54
AFF3-215ENST00000498090 SLC9A5Q14940 896 aa11.68□□□□□ -0.54
AFF3-215ENST00000498090 C3orf38Q5JPI3 329 aa11.68□□□□□ -0.54
AFF3-215ENST00000498090 SLC36A4Q6YBV0 504 aa11.68□□□□□ -0.54
AFF3-215ENST00000498090 TMEFF1Q8IYR6 380 aa11.68□□□□□ -0.54
AFF3-215ENST00000498090 SLC22A18ASQ8N1D0 253 aa11.68□□□□□ -0.54
AFF3-215ENST00000498090 SLC7A13Q8TCU3 470 aa11.68□□□□□ -0.54
AFF3-215ENST00000498090 CREB3L4Q8TEY5 395 aa11.68□□□□□ -0.54
AFF3-215ENST00000498090 RAB8BQ92930 207 aa11.68□□□□□ -0.54
AFF3-215ENST00000498090 HSPA12BQ96MM6 686 aa11.68□□□□□ -0.54
AFF3-215ENST00000498090 AMDHD1Q96NU7 426 aa11.68□□□□□ -0.54
AFF3-215ENST00000498090 PRAP1Q96NZ9 151 aa11.68□□□□□ -0.54
AFF3-215ENST00000498090 TIMM29Q9BSF4 260 aa11.68□□□□□ -0.54
AFF3-215ENST00000498090 TSSK6Q9BXA6 273 aa11.68□□□□□ -0.54
AFF3-215ENST00000498090 PINK1Q9BXM7 581 aa11.68□□□□□ -0.54
AFF3-215ENST00000498090 ROGDIQ9GZN7 287 aa11.68□□□□□ -0.54
AFF3-215ENST00000498090 SMURF1Q9HCE7 757 aa11.68□□□□□ -0.54
AFF3-215ENST00000498090 POLE4Q9NR33 117 aa11.68□□□□□ -0.54
AFF3-215ENST00000498090 GPR27Q9NS67 375 aa11.68□□□□□ -0.54
AFF3-215ENST00000498090 TM7SF3Q9NS93 570 aa11.68□□□□□ -0.54
AFF3-215ENST00000498090 ZCCHC3Q9NUD5 404 aaKnown RBP11.68□□□□□ -0.54
AFF3-215ENST00000498090 CUEDC1Q9NWM3 386 aaPredicted RBP11.68□□□□□ -0.54
AFF3-215ENST00000498090 HS3ST3A1Q9Y663 406 aa11.68□□□□□ -0.54
AFF3-215ENST00000498090 LRIT2A6NDA9 550 aa11.68□□□□□ -0.54
AFF3-215ENST00000498090 M0R129 80 aa11.68□□□□□ -0.54
AFF3-215ENST00000498090 DYRK3O43781 588 aa11.68□□□□□ -0.54
AFF3-215ENST00000498090 B4GALT2O60909 372 aa11.68□□□□□ -0.54
AFF3-215ENST00000498090 SEMA7AO75326 666 aa11.68□□□□□ -0.54
AFF3-215ENST00000498090 IL1AP01583 271 aa11.68□□□□□ -0.54
AFF3-215ENST00000498090 WNT1P04628 370 aa11.68□□□□□ -0.54
AFF3-215ENST00000498090 OR12D1P0DN82 309 aa11.68□□□□□ -0.54
AFF3-215ENST00000498090 CD27P26842 260 aa11.68□□□□□ -0.54
AFF3-215ENST00000498090 MAOBP27338 520 aa11.68□□□□□ -0.54
AFF3-215ENST00000498090 AHRP35869 848 aa11.68□□□□□ -0.54
AFF3-215ENST00000498090 NUDT1P36639 197 aa11.68□□□□□ -0.54
AFF3-215ENST00000498090 SEPHS1P49903 392 aa11.68□□□□□ -0.54
AFF3-215ENST00000498090 CDK5Q00535 292 aa11.68□□□□□ -0.54
AFF3-215ENST00000498090 BNC1Q01954 994 aa11.68□□□□□ -0.54
AFF3-215ENST00000498090 RAB40BQ12829 278 aa11.68□□□□□ -0.54
AFF3-215ENST00000498090 ZIC1Q15915 447 aa11.68□□□□□ -0.54
AFF3-215ENST00000498090 NDUFAF5Q5TEU4 345 aa11.68□□□□□ -0.54
AFF3-215ENST00000498090 Q6ZSR6 202 aa11.68□□□□□ -0.54
AFF3-215ENST00000498090 UBE3DQ7Z6J8 389 aa11.68□□□□□ -0.54
AFF3-215ENST00000498090 CLDN22Q8N7P3 220 aa11.68□□□□□ -0.54
AFF3-215ENST00000498090 LMNTD1Q8N9Z9 388 aa11.68□□□□□ -0.54
AFF3-215ENST00000498090 OR2L8Q8NGY9 312 aa11.68□□□□□ -0.54
AFF3-215ENST00000498090 OR1E3Q8WZA6 343 aa11.68□□□□□ -0.54
AFF3-215ENST00000498090 HTRA1Q92743 480 aa11.68□□□□□ -0.54
AFF3-215ENST00000498090 SCARF2Q96GP6 870 aaPredicted RBP11.68□□□□□ -0.54
AFF3-215ENST00000498090 BBS4Q96RK4 519 aa11.68□□□□□ -0.54
AFF3-215ENST00000498090 DPH7Q9BTV6 452 aa11.68□□□□□ -0.54
AFF3-215ENST00000498090 MED18Q9BUE0 208 aa11.68□□□□□ -0.54
AFF3-215ENST00000498090 SARGQ9BW04 601 aa11.68□□□□□ -0.54
AFF3-215ENST00000498090 TEX12Q9BXU0 123 aa11.68□□□□□ -0.54
AFF3-215ENST00000498090 POLR2J2Q9GZM3 115 aaKnown RBP11.68□□□□□ -0.54
AFF3-215ENST00000498090 GLIPR2Q9H4G4 154 aa11.68□□□□□ -0.54
AFF3-215ENST00000498090 MVB12BQ9H7P6 319 aa11.68□□□□□ -0.54
AFF3-215ENST00000498090 SLC23A2Q9UGH3 650 aa11.68□□□□□ -0.54
AFF3-215ENST00000498090 SLC6A14Q9UN76 642 aa11.68□□□□□ -0.54
AFF3-215ENST00000498090 LIPT1Q9Y234 373 aa11.68□□□□□ -0.54
AFF3-215ENST00000498090 PCDHGB2Q9Y5G2 931 aa11.68□□□□□ -0.54
AFF3-215ENST00000498090 VPS13AQ96RL7 3174 aa11.67□□□□□ -0.54
AFF3-215ENST00000498090 A0A1W2PR77 199 aa11.67□□□□□ -0.54
AFF3-215ENST00000498090 FHP07954 510 aa11.67□□□□□ -0.54
AFF3-215ENST00000498090 NR2F6P10588 404 aa11.67□□□□□ -0.54
AFF3-215ENST00000498090 MYL12AP19105 171 aa11.67□□□□□ -0.54
AFF3-215ENST00000498090 CRYBB2P43320 205 aa11.67□□□□□ -0.54
AFF3-215ENST00000498090 GIPRP48546 466 aa11.67□□□□□ -0.54
AFF3-215ENST00000498090 CLCNKAP51800 687 aa11.67□□□□□ -0.54
AFF3-215ENST00000498090 NCBP2P52298 156 aaKnown RBP eCLIP11.67□□□□□ -0.54
AFF3-215ENST00000498090 TPTEP56180 551 aa11.67□□□□□ -0.54
AFF3-215ENST00000498090 PRR5P85299 388 aa11.67□□□□□ -0.54
AFF3-215ENST00000498090 SELENBP1Q13228 472 aa11.67□□□□□ -0.54
AFF3-215ENST00000498090 PODNL1Q6PEZ8 512 aa11.67□□□□□ -0.54
AFF3-215ENST00000498090 ENPP7Q6UWV6 458 aa11.67□□□□□ -0.54
AFF3-215ENST00000498090 CCBE1Q6UXH8 406 aaPredicted RBP11.67□□□□□ -0.54
AFF3-215ENST00000498090 MRGPREQ86SM8 312 aa11.67□□□□□ -0.54
AFF3-215ENST00000498090 NLGN4XQ8N0W4 816 aa11.67□□□□□ -0.54
AFF3-215ENST00000498090 C2orf73Q8N5S3 287 aaPredicted RBP11.67□□□□□ -0.54
AFF3-215ENST00000498090 TCEANCQ8N8B7 351 aa11.67□□□□□ -0.54
AFF3-215ENST00000498090 TOR1AIP2Q8NFQ8 470 aa11.67□□□□□ -0.54
AFF3-215ENST00000498090 OR4K5Q8NGD3 323 aa11.67□□□□□ -0.54
AFF3-215ENST00000498090 VANGL1Q8TAA9 524 aaPredicted RBP11.67□□□□□ -0.54
AFF3-215ENST00000498090 C1orf216Q8TAB5 229 aa11.67□□□□□ -0.54
AFF3-215ENST00000498090 GNPDA2Q8TDQ7 276 aa11.67□□□□□ -0.54
AFF3-215ENST00000498090 XAGE5Q8WWM1 108 aa11.67□□□□□ -0.54
AFF3-215ENST00000498090 WDR92Q96MX6 357 aa11.67□□□□□ -0.54
AFF3-215ENST00000498090 SLC38A2Q96QD8 506 aa11.67□□□□□ -0.54
AFF3-215ENST00000498090 FERD3LQ96RJ6 166 aa11.67□□□□□ -0.54
AFF3-215ENST00000498090 CNPPD1Q9BV87 410 aa11.67□□□□□ -0.54
AFF3-215ENST00000498090 ABCG4Q9H172 646 aa11.67□□□□□ -0.54
AFF3-215ENST00000498090 RNF167Q9H6Y7 350 aa11.67□□□□□ -0.54
AFF3-215ENST00000498090 FGF20Q9NP95 211 aaPredicted RBP11.67□□□□□ -0.54
AFF3-215ENST00000498090 EXOSC4Q9NPD3 245 aaKnown RBP11.67□□□□□ -0.54
AFF3-215ENST00000498090 GIMAP4Q9NUV9 329 aa11.67□□□□□ -0.54
AFF3-215ENST00000498090 TEX10Q9NXF1 929 aaPredicted RBP11.67□□□□□ -0.54
AFF3-215ENST00000498090 TAS2R16Q9NYV7 291 aa11.67□□□□□ -0.54
AFF3-215ENST00000498090 DNAJC27Q9NZQ0 273 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms