RNA–Protein interactions for RNA: ENST00000498041.1

RIF1-212, Transcript of replication timing regulatory factor 1, humanhuman

TSL 3

Gene RIF1, Length 776 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-212ENST00000498041 METTL13Q8N6R0 699 aa2.29□□□□□ -2.04
RIF1-212ENST00000498041 MLKLQ8NB16 471 aa2.29□□□□□ -2.04
RIF1-212ENST00000498041 UBA3Q8TBC4 463 aa2.29□□□□□ -2.04
RIF1-212ENST00000498041 SPATA18Q8TC71 538 aa2.29□□□□□ -2.04
RIF1-212ENST00000498041 TRAF3IP1Q8TDR0 691 aaPredicted RBP2.29□□□□□ -2.04
RIF1-212ENST00000498041 U2AF1L4Q8WU68 220 aaKnown RBP2.29□□□□□ -2.04
RIF1-212ENST00000498041 DEPDC1BQ8WUY9 529 aa2.29□□□□□ -2.04
RIF1-212ENST00000498041 C11orf52Q96A22 123 aa2.29□□□□□ -2.04
RIF1-212ENST00000498041 SLC35C1Q96A29 364 aa2.29□□□□□ -2.04
RIF1-212ENST00000498041 SGF29Q96ES7 293 aa2.29□□□□□ -2.04
RIF1-212ENST00000498041 DHTKD1Q96HY7 919 aaPredicted RBP2.29□□□□□ -2.04
RIF1-212ENST00000498041 PIWIL1Q96J94 861 aaKnown RBP2.29□□□□□ -2.04
RIF1-212ENST00000498041 CAPZA3Q96KX2 299 aa2.29□□□□□ -2.04
RIF1-212ENST00000498041 CAPNS2Q96L46 248 aa2.29□□□□□ -2.04
RIF1-212ENST00000498041 GSDMAQ96QA5 445 aa2.29□□□□□ -2.04
RIF1-212ENST00000498041 BPIFA3Q9BQP9 254 aa2.29□□□□□ -2.04
RIF1-212ENST00000498041 MRPL45Q9BRJ2 306 aaKnown RBP2.29□□□□□ -2.04
RIF1-212ENST00000498041 CARD6Q9BX69 1037 aa2.29□□□□□ -2.04
RIF1-212ENST00000498041 TEX13BQ9BXU2 312 aa2.29□□□□□ -2.04
RIF1-212ENST00000498041 KRTAP4-3Q9BYR4 195 aa2.29□□□□□ -2.04
RIF1-212ENST00000498041 NEUROG2Q9H2A3 272 aa2.29□□□□□ -2.04
RIF1-212ENST00000498041 DPEP3Q9H4B8 488 aa2.29□□□□□ -2.04
RIF1-212ENST00000498041 HAUS4Q9H6D7 363 aa2.29□□□□□ -2.04
RIF1-212ENST00000498041 FNDC4Q9H6D8 234 aaPredicted RBP2.29□□□□□ -2.04
RIF1-212ENST00000498041 JPT2Q9H910 190 aa2.29□□□□□ -2.04
RIF1-212ENST00000498041 TUFT1Q9NNX1 390 aa2.29□□□□□ -2.04
RIF1-212ENST00000498041 ZCCHC17Q9NP64 241 aaKnown RBP2.29□□□□□ -2.04
RIF1-212ENST00000498041 IL1RAPQ9NPH3 570 aa2.29□□□□□ -2.04
RIF1-212ENST00000498041 HOXC10Q9NYD6 342 aa2.29□□□□□ -2.04
RIF1-212ENST00000498041 TUBGCP4Q9UGJ1 667 aa2.29□□□□□ -2.04
RIF1-212ENST00000498041 PILRAQ9UKJ1 303 aa2.29□□□□□ -2.04
RIF1-212ENST00000498041 GTF3C4Q9UKN8 822 aa2.29□□□□□ -2.04
RIF1-212ENST00000498041 ITGA11Q9UKX5 1188 aa2.29□□□□□ -2.04
RIF1-212ENST00000498041 RARRES3Q9UL19 164 aa2.29□□□□□ -2.04
RIF1-212ENST00000498041 GUCA1BQ9UMX6 200 aa2.29□□□□□ -2.04
RIF1-212ENST00000498041 MFHAS1Q9Y4C4 1052 aa2.29□□□□□ -2.04
RIF1-212ENST00000498041 POMT1Q9Y6A1 747 aa2.29□□□□□ -2.04
RIF1-212ENST00000498041 CUL9Q8IWT3 2517 aa2.29□□□□□ -2.04
RIF1-212ENST00000498041 GON4LQ3T8J9 2241 aa2.29□□□□□ -2.04
RIF1-212ENST00000498041 FER1L5A0AVI2 2057 aa2.29□□□□□ -2.04
RIF1-212ENST00000498041 GBF1Q92538 1859 aa2.28□□□□□ -2.04
RIF1-212ENST00000498041 PATJQ8NI35 1801 aa2.28□□□□□ -2.04
RIF1-212ENST00000498041 KIAA1671Q9BY89 1806 aa2.28□□□□□ -2.04
RIF1-212ENST00000498041 IGKV6-21A0A0C4DH24 114 aa2.28□□□□□ -2.04
RIF1-212ENST00000498041 C2orf92A0A1B0GVN3 265 aa2.28□□□□□ -2.04
RIF1-212ENST00000498041 PVALEFA0A1B0GWK0 134 aa2.28□□□□□ -2.04
RIF1-212ENST00000498041 MACROD2A1Z1Q3 448 aa2.28□□□□□ -2.04
RIF1-212ENST00000498041 SRRM5B3KS81 715 aa2.28□□□□□ -2.04
RIF1-212ENST00000498041 SHISA9B4DS77 424 aa2.28□□□□□ -2.04
RIF1-212ENST00000498041 ZNF732B4DXR9 585 aa2.28□□□□□ -2.04
RIF1-212ENST00000498041 KBTBD13C9JR72 458 aa2.28□□□□□ -2.04
RIF1-212ENST00000498041 LMO7DNF2Z398 122 aa2.28□□□□□ -2.04
RIF1-212ENST00000498041 CLDN5O00501 218 aa2.28□□□□□ -2.04
RIF1-212ENST00000498041 OGTO15294 1046 aa2.28□□□□□ -2.04
RIF1-212ENST00000498041 BCL2L11O43521 198 aa2.28□□□□□ -2.04
RIF1-212ENST00000498041 ACSL4O60488 711 aa2.28□□□□□ -2.04
RIF1-212ENST00000498041 GALR3O60755 368 aaPredicted RBP2.28□□□□□ -2.04
RIF1-212ENST00000498041 PIAS1O75925 651 aa2.28□□□□□ -2.04
RIF1-212ENST00000498041 HLA-DRAP01903 254 aa2.28□□□□□ -2.04
RIF1-212ENST00000498041 OR4Q2P0C623 313 aa2.28□□□□□ -2.04
RIF1-212ENST00000498041 CXCL8P10145 99 aa2.28□□□□□ -2.04
RIF1-212ENST00000498041 ARF4P18085 180 aaPredicted RBP2.28□□□□□ -2.04
RIF1-212ENST00000498041 FCGR2BP31994 310 aaPredicted RBP2.28□□□□□ -2.04
RIF1-212ENST00000498041 FCGR2CP31995 323 aa2.28□□□□□ -2.04
RIF1-212ENST00000498041 SLC1A3P43003 542 aa2.28□□□□□ -2.04
RIF1-212ENST00000498041 BRCC3P46736 316 aa2.28□□□□□ -2.04
RIF1-212ENST00000498041 OR3A1P47881 315 aa2.28□□□□□ -2.04
RIF1-212ENST00000498041 ATP4BP51164 291 aa2.28□□□□□ -2.04
RIF1-212ENST00000498041 ZNF131P52739 623 aa2.28□□□□□ -2.04
RIF1-212ENST00000498041 RIDAP52758 137 aaKnown RBP2.28□□□□□ -2.04
RIF1-212ENST00000498041 CRYBA2P53672 197 aa2.28□□□□□ -2.04
RIF1-212ENST00000498041 CCL23P55773 120 aa2.28□□□□□ -2.04
RIF1-212ENST00000498041 GTF2BQ00403 316 aa2.28□□□□□ -2.04
RIF1-212ENST00000498041 FOLH1Q04609 750 aa2.28□□□□□ -2.04
RIF1-212ENST00000498041 CNTN1Q12860 1018 aa2.28□□□□□ -2.04
RIF1-212ENST00000498041 ZRANB3Q5FWF4 1079 aa2.28□□□□□ -2.04
RIF1-212ENST00000498041 SLC25A30Q5SVS4 291 aa2.28□□□□□ -2.04
RIF1-212ENST00000498041 CASC4Q6P4E1 433 aa2.28□□□□□ -2.04
RIF1-212ENST00000498041 DCLRE1AQ6PJP8 1040 aa2.28□□□□□ -2.04
RIF1-212ENST00000498041 MSANTD1Q6ZTZ1 278 aa2.28□□□□□ -2.04
RIF1-212ENST00000498041 RFPL4BQ6ZWI9 263 aa2.28□□□□□ -2.04
RIF1-212ENST00000498041 Q71RC1 249 aaPredicted RBP2.28□□□□□ -2.04
RIF1-212ENST00000498041 GLRX5Q86SX6 157 aa2.28□□□□□ -2.04
RIF1-212ENST00000498041 CCDC65Q8IXS2 484 aa2.28□□□□□ -2.04
RIF1-212ENST00000498041 SYCP3Q8IZU3 236 aa2.28□□□□□ -2.04
RIF1-212ENST00000498041 ABCA7Q8IZY2 2146 aa2.28□□□□□ -2.04
RIF1-212ENST00000498041 SIX6OS1Q8N1H7 587 aa2.28□□□□□ -2.04
RIF1-212ENST00000498041 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP2.28□□□□□ -2.04
RIF1-212ENST00000498041 TMEM99Q8N816 258 aa2.28□□□□□ -2.04
RIF1-212ENST00000498041 C12orf29Q8N999 325 aa2.28□□□□□ -2.04
RIF1-212ENST00000498041 RNF149Q8NC42 400 aa2.28□□□□□ -2.04
RIF1-212ENST00000498041 JOSD2Q8TAC2 188 aa2.28□□□□□ -2.04
RIF1-212ENST00000498041 SSC4DQ8WTU2 575 aa2.28□□□□□ -2.04
RIF1-212ENST00000498041 KRT35Q92764 455 aa2.28□□□□□ -2.04
RIF1-212ENST00000498041 SYAP1Q96A49 352 aaPredicted RBP2.28□□□□□ -2.04
RIF1-212ENST00000498041 RIT2Q99578 217 aa2.28□□□□□ -2.04
RIF1-212ENST00000498041 HNRNPABQ99729 332 aaKnown RBP2.28□□□□□ -2.04
RIF1-212ENST00000498041 PRMT1Q99873 361 aaKnown RBP2.28□□□□□ -2.04
RIF1-212ENST00000498041 CITED2Q99967 270 aaPredicted RBP2.28□□□□□ -2.04
RIF1-212ENST00000498041 ATG101Q9BSB4 218 aa2.28□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms