RNA–Protein interactions for RNA: ENST00000497488.1

BRCA1-224, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-224ENST00000497488 FLRT3Q9NZU0 649 aa5.46□□□□□ -1.54
BRCA1-224ENST00000497488 IL36RNQ9UBH0 155 aa5.46□□□□□ -1.54
BRCA1-224ENST00000497488 PACSIN3Q9UKS6 424 aa5.46□□□□□ -1.54
BRCA1-224ENST00000497488 TCAF1Q9Y4C2 921 aa5.46□□□□□ -1.54
BRCA1-224ENST00000497488 NPTNQ9Y639 398 aa5.46□□□□□ -1.54
BRCA1-224ENST00000497488 MARF1Q9Y4F3 1742 aaKnown RBP5.45□□□□□ -1.54
BRCA1-224ENST00000497488 CD163L1Q9NR16 1453 aa5.45□□□□□ -1.54
BRCA1-224ENST00000497488 PHRF1Q9P1Y6 1649 aaKnown RBP5.45□□□□□ -1.54
BRCA1-224ENST00000497488 ARHGEF10O15013 1369 aa5.45□□□□□ -1.54
BRCA1-224ENST00000497488 INSRP06213 1382 aa5.45□□□□□ -1.54
BRCA1-224ENST00000497488 SLIT2O94813 1529 aa5.45□□□□□ -1.54
BRCA1-224ENST00000497488 PPIAL4EA0A075B759 164 aa5.45□□□□□ -1.54
BRCA1-224ENST00000497488 PALM2-AKAP2B1ALY0 433 aaPredicted RBP5.45□□□□□ -1.54
BRCA1-224ENST00000497488 PSMD11O00231 422 aa5.45□□□□□ -1.54
BRCA1-224ENST00000497488 DUX1O43812 170 aa5.45□□□□□ -1.54
BRCA1-224ENST00000497488 SLC28A2O43868 658 aa5.45□□□□□ -1.54
BRCA1-224ENST00000497488 NUAK1O60285 661 aa5.45□□□□□ -1.54
BRCA1-224ENST00000497488 TSPAN2O60636 221 aa5.45□□□□□ -1.54
BRCA1-224ENST00000497488 TPST2O60704 377 aa5.45□□□□□ -1.54
BRCA1-224ENST00000497488 CST1P01037 141 aa5.45□□□□□ -1.54
BRCA1-224ENST00000497488 FTH1P02794 183 aa5.45□□□□□ -1.54
BRCA1-224ENST00000497488 STAG3L2P0CL84 134 aa5.45□□□□□ -1.54
BRCA1-224ENST00000497488 PPIAL4FP0DN26 164 aa5.45□□□□□ -1.54
BRCA1-224ENST00000497488 PRF1P14222 555 aa5.45□□□□□ -1.54
BRCA1-224ENST00000497488 POU2F1P14859 743 aa5.45□□□□□ -1.54
BRCA1-224ENST00000497488 MYOD1P15172 320 aa5.45□□□□□ -1.54
BRCA1-224ENST00000497488 PTNP21246 168 aa5.45□□□□□ -1.54
BRCA1-224ENST00000497488 CTNNA2P26232 953 aa5.45□□□□□ -1.54
BRCA1-224ENST00000497488 SELENOPP49908 381 aa5.45□□□□□ -1.54
BRCA1-224ENST00000497488 CDH6P55285 790 aa5.45□□□□□ -1.54
BRCA1-224ENST00000497488 B3GALT5-AS1P59052 145 aa5.45□□□□□ -1.54
BRCA1-224ENST00000497488 DAOAP59103 153 aa5.45□□□□□ -1.54
BRCA1-224ENST00000497488 TUBA4AP68366 448 aa5.45□□□□□ -1.54
BRCA1-224ENST00000497488 SRYQ05066 204 aa5.45□□□□□ -1.54
BRCA1-224ENST00000497488 PPIL2Q13356 520 aa5.45□□□□□ -1.54
BRCA1-224ENST00000497488 MESDQ14696 234 aa5.45□□□□□ -1.54
BRCA1-224ENST00000497488 DUOXA1Q1HG43 343 aa5.45□□□□□ -1.54
BRCA1-224ENST00000497488 CEP78Q5JTW2 689 aa5.45□□□□□ -1.54
BRCA1-224ENST00000497488 SLC35D3Q5M8T2 416 aa5.45□□□□□ -1.54
BRCA1-224ENST00000497488 PDZK1Q5T2W1 519 aa5.45□□□□□ -1.54
BRCA1-224ENST00000497488 PLPP4Q5VZY2 271 aa5.45□□□□□ -1.54
BRCA1-224ENST00000497488 OR4F3Q6IEY1 312 aa5.45□□□□□ -1.54
BRCA1-224ENST00000497488 CORO6Q6QEF8 472 aa5.45□□□□□ -1.54
BRCA1-224ENST00000497488 CCNI2Q6ZMN8 369 aaPredicted RBP5.45□□□□□ -1.54
BRCA1-224ENST00000497488 P4HA3Q7Z4N8 544 aa5.45□□□□□ -1.54
BRCA1-224ENST00000497488 KIAA1328Q86T90 577 aa5.45□□□□□ -1.54
BRCA1-224ENST00000497488 LINC00523Q86TU6 105 aa5.45□□□□□ -1.54
BRCA1-224ENST00000497488 TPRA1Q86W33 373 aa5.45□□□□□ -1.54
BRCA1-224ENST00000497488 C17orf64Q86WR6 236 aa5.45□□□□□ -1.54
BRCA1-224ENST00000497488 ERO1BQ86YB8 467 aa5.45□□□□□ -1.54
BRCA1-224ENST00000497488 OR4D5Q8NGN0 318 aa5.45□□□□□ -1.54
BRCA1-224ENST00000497488 CD99L2Q8TCZ2 262 aa5.45□□□□□ -1.54
BRCA1-224ENST00000497488 PHLDA1Q8WV24 401 aaPredicted RBP5.45□□□□□ -1.54
BRCA1-224ENST00000497488 ELMO1Q92556 727 aa5.45□□□□□ -1.54
BRCA1-224ENST00000497488 EXTL1Q92935 676 aa5.45□□□□□ -1.54
BRCA1-224ENST00000497488 SLCO2A1Q92959 643 aa5.45□□□□□ -1.54
BRCA1-224ENST00000497488 ABTB1Q969K4 478 aaPredicted RBP5.45□□□□□ -1.54
BRCA1-224ENST00000497488 PELI1Q96FA3 418 aa5.45□□□□□ -1.54
BRCA1-224ENST00000497488 ARL5BQ96KC2 179 aa5.45□□□□□ -1.54
BRCA1-224ENST00000497488 TECTBQ96PL2 329 aa5.45□□□□□ -1.54
BRCA1-224ENST00000497488 DUX5Q96PT3 197 aa5.45□□□□□ -1.54
BRCA1-224ENST00000497488 UHRF2Q96PU4 802 aa5.45□□□□□ -1.54
BRCA1-224ENST00000497488 ERGIC2Q96RQ1 377 aa5.45□□□□□ -1.54
BRCA1-224ENST00000497488 TGS1Q96RS0 853 aaKnown RBP5.45□□□□□ -1.54
BRCA1-224ENST00000497488 CSF3RQ99062 836 aa5.45□□□□□ -1.54
BRCA1-224ENST00000497488 CENPKQ9BS16 269 aa5.45□□□□□ -1.54
BRCA1-224ENST00000497488 DCLK3Q9C098 648 aa5.45□□□□□ -1.54
BRCA1-224ENST00000497488 FBXO44Q9H4M3 255 aa5.45□□□□□ -1.54
BRCA1-224ENST00000497488 GNG12Q9UBI6 72 aa5.45□□□□□ -1.54
BRCA1-224ENST00000497488 PPIAL4AQ9Y536 164 aa5.45□□□□□ -1.54
BRCA1-224ENST00000497488 RGS12O14924 1447 aa5.45□□□□□ -1.54
BRCA1-224ENST00000497488 ATRNO75882 1429 aa5.45□□□□□ -1.54
BRCA1-224ENST00000497488 USP6P35125 1406 aa5.45□□□□□ -1.54
BRCA1-224ENST00000497488 SSH2Q76I76 1423 aa5.45□□□□□ -1.54
BRCA1-224ENST00000497488 NRKQ7Z2Y5 1582 aa5.45□□□□□ -1.54
BRCA1-224ENST00000497488 EVC2Q86UK5 1308 aa5.45□□□□□ -1.54
BRCA1-224ENST00000497488 USP47Q96K76 1375 aa5.44□□□□□ -1.54
BRCA1-224ENST00000497488 ZMYM2Q9UBW7 1377 aa5.44□□□□□ -1.54
BRCA1-224ENST00000497488 PLCH1Q4KWH8 1693 aa5.44□□□□□ -1.54
BRCA1-224ENST00000497488 A0A0G2JNG1 304 aa5.44□□□□□ -1.54
BRCA1-224ENST00000497488 GRID2IPA4D2P6 1211 aa5.44□□□□□ -1.54
BRCA1-224ENST00000497488 LILRA5A6NI73 299 aa5.44□□□□□ -1.54
BRCA1-224ENST00000497488 ZNF814B7Z6K7 855 aa5.44□□□□□ -1.54
BRCA1-224ENST00000497488 HAS3O00219 553 aa5.44□□□□□ -1.54
BRCA1-224ENST00000497488 SH2D1BO14796 132 aa5.44□□□□□ -1.54
BRCA1-224ENST00000497488 POLR1CO15160 346 aaPredicted RBP5.44□□□□□ -1.54
BRCA1-224ENST00000497488 CLPXO76031 633 aa5.44□□□□□ -1.54
BRCA1-224ENST00000497488 SNAI1O95863 264 aaPredicted RBP5.44□□□□□ -1.54
BRCA1-224ENST00000497488 CLTAP09496 248 aa5.44□□□□□ -1.54
BRCA1-224ENST00000497488 GLRA1P23415 457 aa5.44□□□□□ -1.54
BRCA1-224ENST00000497488 BCAP31P51572 246 aa5.44□□□□□ -1.54
BRCA1-224ENST00000497488 SGSHP51688 502 aa5.44□□□□□ -1.54
BRCA1-224ENST00000497488 NDST1P52848 882 aa5.44□□□□□ -1.54
BRCA1-224ENST00000497488 SEC61A1P61619 476 aaKnown RBP5.44□□□□□ -1.54
BRCA1-224ENST00000497488 CPSF1Q10570 1443 aaKnown RBP5.44□□□□□ -1.54
BRCA1-224ENST00000497488 BST2Q10589 180 aaKnown RBP5.44□□□□□ -1.54
BRCA1-224ENST00000497488 XRCC4Q13426 336 aa5.44□□□□□ -1.54
BRCA1-224ENST00000497488 GPR18Q14330 331 aa5.44□□□□□ -1.54
BRCA1-224ENST00000497488 KIR2DS5Q14953 304 aa5.44□□□□□ -1.54
BRCA1-224ENST00000497488 RBBP5Q15291 538 aaKnown RBP5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms