RNA–Protein interactions for RNA: ENST00000497415.1

RPN1-208, Transcript of ribophorin I, humanhuman

TSL 4

Gene RPN1, Length 547 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPN1-208ENST00000497415 AKAP10O43572 662 aa17.1■□□□□ 0.33
RPN1-208ENST00000497415 TSPAN2O60636 221 aa17.1■□□□□ 0.33
RPN1-208ENST00000497415 ABCB7O75027 752 aa17.1■□□□□ 0.33
RPN1-208ENST00000497415 PEX11AO75192 247 aa17.1■□□□□ 0.33
RPN1-208ENST00000497415 ERLIN1O75477 346 aa17.1■□□□□ 0.33
RPN1-208ENST00000497415 LYPLA1O75608 230 aaPredicted RBP17.1■□□□□ 0.33
RPN1-208ENST00000497415 SNUPNO95149 360 aaKnown RBP17.1■□□□□ 0.33
RPN1-208ENST00000497415 HSPA4LO95757 839 aa17.1■□□□□ 0.33
RPN1-208ENST00000497415 MYZAPP0CAP1 466 aa17.1■□□□□ 0.33
RPN1-208ENST00000497415 ENDOUP21128 410 aaKnown RBP17.1■□□□□ 0.33
RPN1-208ENST00000497415 MAPK1P28482 360 aa17.1■□□□□ 0.33
RPN1-208ENST00000497415 DCTP40126 519 aa17.1■□□□□ 0.33
RPN1-208ENST00000497415 ABCE1P61221 599 aaKnown RBP17.1■□□□□ 0.33
RPN1-208ENST00000497415 PSG6Q00889 435 aa17.1■□□□□ 0.33
RPN1-208ENST00000497415 ANKRD26P1Q6NSI1 321 aa17.1■□□□□ 0.33
RPN1-208ENST00000497415 CLHC1Q8NHS4 586 aa17.1■□□□□ 0.33
RPN1-208ENST00000497415 PPCDCQ96CD2 204 aa17.1■□□□□ 0.33
RPN1-208ENST00000497415 COL21A1Q96P44 957 aa17.1■□□□□ 0.33
RPN1-208ENST00000497415 GIMAP2Q9UG22 337 aa17.1■□□□□ 0.33
RPN1-208ENST00000497415 EPB41L3Q9Y2J2 1087 aaPredicted RBP17.1■□□□□ 0.33
RPN1-208ENST00000497415 UNC79Q9P2D8 2635 aa17.09■□□□□ 0.33
RPN1-208ENST00000497415 ICOSLGO75144 302 aa17.09■□□□□ 0.33
RPN1-208ENST00000497415 SKAP2O75563 359 aaPredicted RBP17.09■□□□□ 0.33
RPN1-208ENST00000497415 REM1O75628 298 aa17.09■□□□□ 0.33
RPN1-208ENST00000497415 PNLIPRP2P54317 469 aa17.09■□□□□ 0.33
RPN1-208ENST00000497415 ATP6AP1LQ52LC2 224 aa17.09■□□□□ 0.33
RPN1-208ENST00000497415 TIGD3Q6B0B8 471 aa17.09■□□□□ 0.33
RPN1-208ENST00000497415 TMEM211Q6ICI0 200 aa17.09■□□□□ 0.33
RPN1-208ENST00000497415 ZNF551Q7Z340 670 aaPredicted RBP17.09■□□□□ 0.33
RPN1-208ENST00000497415 R3HCC1LQ7Z5L2 792 aaKnown RBP17.09■□□□□ 0.33
RPN1-208ENST00000497415 SLC44A2Q8IWA5 706 aaPredicted RBP17.09■□□□□ 0.33
RPN1-208ENST00000497415 MARVELD2Q8N4S9 558 aa17.09■□□□□ 0.33
RPN1-208ENST00000497415 NEIL3Q8TAT5 605 aa17.09■□□□□ 0.33
RPN1-208ENST00000497415 RNF138Q8WVD3 245 aa17.09■□□□□ 0.33
RPN1-208ENST00000497415 CIDECQ96AQ7 238 aaPredicted RBP17.09■□□□□ 0.33
RPN1-208ENST00000497415 SARAFQ96BY9 339 aa17.09■□□□□ 0.33
RPN1-208ENST00000497415 ZBTB9Q96C00 473 aa17.09■□□□□ 0.33
RPN1-208ENST00000497415 OSBPL11Q9BXB4 747 aa17.09■□□□□ 0.33
RPN1-208ENST00000497415 C20orf27Q9GZN8 174 aa17.09■□□□□ 0.33
RPN1-208ENST00000497415 METTL7AQ9H8H3 244 aa17.09■□□□□ 0.33
RPN1-208ENST00000497415 ZNF395Q9H8N7 513 aaPredicted RBP17.09■□□□□ 0.33
RPN1-208ENST00000497415 KCNK9Q9NPC2 374 aa17.09■□□□□ 0.33
RPN1-208ENST00000497415 PNPLA3Q9NST1 481 aa17.09■□□□□ 0.33
RPN1-208ENST00000497415 ACSS1Q9NUB1 689 aaPredicted RBP17.09■□□□□ 0.33
RPN1-208ENST00000497415 DDX18Q9NVP1 670 aaKnown RBP17.09■□□□□ 0.33
RPN1-208ENST00000497415 SH3BP4Q9P0V3 963 aa17.09■□□□□ 0.33
RPN1-208ENST00000497415 SPRR3Q9UBC9 169 aa17.09■□□□□ 0.33
RPN1-208ENST00000497415 ATP6V1HQ9UI12 483 aa17.09■□□□□ 0.33
RPN1-208ENST00000497415 HAO1Q9UJM8 370 aa17.09■□□□□ 0.33
RPN1-208ENST00000497415 C15orf41Q9Y2V0 281 aa17.09■□□□□ 0.33
RPN1-208ENST00000497415 PRSS44E7EML9 344 aa17.08■□□□□ 0.32
RPN1-208ENST00000497415 HPNP05981 417 aa17.08■□□□□ 0.32
RPN1-208ENST00000497415 PRPS2P11908 318 aa17.08■□□□□ 0.32
RPN1-208ENST00000497415 GRK2P25098 689 aa17.08■□□□□ 0.32
RPN1-208ENST00000497415 ELAVL4P26378 380 aaKnown RBP17.08■□□□□ 0.32
RPN1-208ENST00000497415 GDF1P27539 372 aa17.08■□□□□ 0.32
RPN1-208ENST00000497415 PTPN6P29350 595 aa17.08■□□□□ 0.32
RPN1-208ENST00000497415 MASP1P48740 699 aa17.08■□□□□ 0.32
RPN1-208ENST00000497415 CDK9P50750 372 aaKnown RBP17.08■□□□□ 0.32
RPN1-208ENST00000497415 ZNF155Q12901 538 aaPredicted RBP17.08■□□□□ 0.32
RPN1-208ENST00000497415 EFR3AQ14156 821 aa17.08■□□□□ 0.32
RPN1-208ENST00000497415 ZNF630Q2M218 657 aaPredicted RBP17.08■□□□□ 0.32
RPN1-208ENST00000497415 SP5Q6BEB4 398 aaPredicted RBP17.08■□□□□ 0.32
RPN1-208ENST00000497415 ZNF787Q6DD87 383 aa17.08■□□□□ 0.32
RPN1-208ENST00000497415 LIX1Q8N485 282 aa17.08■□□□□ 0.32
RPN1-208ENST00000497415 ZNF781Q8N8C0 355 aa17.08■□□□□ 0.32
RPN1-208ENST00000497415 OR4N2Q8NGD1 307 aa17.08■□□□□ 0.32
RPN1-208ENST00000497415 ZFP28Q8NHY6 868 aa17.08■□□□□ 0.32
RPN1-208ENST00000497415 TMCO6Q96DC7 493 aa17.08■□□□□ 0.32
RPN1-208ENST00000497415 ZBED6CLQ96FA7 236 aaPredicted RBP17.08■□□□□ 0.32
RPN1-208ENST00000497415 GNRHR2Q96P88 292 aa17.08■□□□□ 0.32
RPN1-208ENST00000497415 ADOQ96SZ5 270 aa17.08■□□□□ 0.32
RPN1-208ENST00000497415 SORT1Q99523 831 aa17.08■□□□□ 0.32
RPN1-208ENST00000497415 LMF2Q9BU23 707 aaKnown RBP17.08■□□□□ 0.32
RPN1-208ENST00000497415 SLC6A15Q9H2J7 730 aa17.08■□□□□ 0.32
RPN1-208ENST00000497415 NTMQ9P121 344 aa17.08■□□□□ 0.32
RPN1-208ENST00000497415 RAP2CQ9Y3L5 183 aa17.08■□□□□ 0.32
RPN1-208ENST00000497415 PCDHGB3Q9Y5G1 929 aa17.08■□□□□ 0.32
RPN1-208ENST00000497415 NAV2Q8IVL1 2488 aa17.07■□□□□ 0.32
RPN1-208ENST00000497415 CACNA1CQ13936 2221 aa17.07■□□□□ 0.32
RPN1-208ENST00000497415 PRAMEF25A6NGN4 478 aa17.07■□□□□ 0.32
RPN1-208ENST00000497415 TTC36A6NLP5 189 aa17.07■□□□□ 0.32
RPN1-208ENST00000497415 SNPHO15079 494 aa17.07■□□□□ 0.32
RPN1-208ENST00000497415 CLDN14O95500 239 aa17.07■□□□□ 0.32
RPN1-208ENST00000497415 KRT20P35900 424 aa17.07■□□□□ 0.32
RPN1-208ENST00000497415 RPL3P39023 403 aaKnown RBP17.07■□□□□ 0.32
RPN1-208ENST00000497415 SLC1A6P48664 564 aa17.07■□□□□ 0.32
RPN1-208ENST00000497415 HSPB3Q12988 150 aa17.07■□□□□ 0.32
RPN1-208ENST00000497415 CDSNQ15517 529 aa17.07■□□□□ 0.32
RPN1-208ENST00000497415 SMU1Q2TAY7 513 aa17.07■□□□□ 0.32
RPN1-208ENST00000497415 CYP27C1Q4G0S4 372 aa17.07■□□□□ 0.32
RPN1-208ENST00000497415 WLSQ5T9L3 541 aa17.07■□□□□ 0.32
RPN1-208ENST00000497415 IL23RQ5VWK5 629 aa17.07■□□□□ 0.32
RPN1-208ENST00000497415 LARP4Q71RC2 724 aaKnown RBP eCLIP17.07■□□□□ 0.32
RPN1-208ENST00000497415 RPRMLQ8N4K4 120 aa17.07■□□□□ 0.32
RPN1-208ENST00000497415 FNDC5Q8NAU1 212 aa17.07■□□□□ 0.32
RPN1-208ENST00000497415 OR5M9Q8NGP3 310 aa17.07■□□□□ 0.32
RPN1-208ENST00000497415 OR1J4Q8NGS1 313 aa17.07■□□□□ 0.32
RPN1-208ENST00000497415 HOXB13Q92826 284 aaPredicted RBP17.07■□□□□ 0.32
RPN1-208ENST00000497415 C1orf50Q9BV19 199 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms