RNA–Protein interactions for RNA: ENST00000497251.1

TRAPPC3-207, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2

Gene TRAPPC3, Length 715 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-207ENST00000497251 OR4F6Q8NGB9 312 aa15.3■□□□□ 0.04
TRAPPC3-207ENST00000497251 SELENOMQ8WWX9 145 aa15.3■□□□□ 0.04
TRAPPC3-207ENST00000497251 PIGTQ969N2 578 aa15.3■□□□□ 0.04
TRAPPC3-207ENST00000497251 KLHL29Q96CT2 875 aa15.3■□□□□ 0.04
TRAPPC3-207ENST00000497251 ZNF681Q96N22 645 aa15.3■□□□□ 0.04
TRAPPC3-207ENST00000497251 STMN4Q9H169 189 aaPredicted RBP15.3■□□□□ 0.04
TRAPPC3-207ENST00000497251 MRPL46Q9H2W6 279 aaKnown RBP15.3■□□□□ 0.04
TRAPPC3-207ENST00000497251 ZBTB26Q9HCK0 441 aa15.3■□□□□ 0.04
TRAPPC3-207ENST00000497251 SERHLQ9NQF3 203 aa15.3■□□□□ 0.04
TRAPPC3-207ENST00000497251 GALNT8Q9NY28 637 aa15.3■□□□□ 0.04
TRAPPC3-207ENST00000497251 CLCF1Q9UBD9 225 aa15.3■□□□□ 0.04
TRAPPC3-207ENST00000497251 VPS29Q9UBQ0 182 aa15.3■□□□□ 0.04
TRAPPC3-207ENST00000497251 TRPS1Q9UHF7 1281 aa15.3■□□□□ 0.04
TRAPPC3-207ENST00000497251 DTX4Q9Y2E6 619 aa15.3■□□□□ 0.04
TRAPPC3-207ENST00000497251 PLLPQ9Y342 182 aa15.3■□□□□ 0.04
TRAPPC3-207ENST00000497251 CBX7O95931 251 aa15.29■□□□□ 0.04
TRAPPC3-207ENST00000497251 RPS17P08708 135 aaKnown RBP15.29■□□□□ 0.04
TRAPPC3-207ENST00000497251 ZNF708P17019 499 aa15.29■□□□□ 0.04
TRAPPC3-207ENST00000497251 CD53P19397 219 aa15.29■□□□□ 0.04
TRAPPC3-207ENST00000497251 SLCO1A2P46721 670 aa15.29■□□□□ 0.04
TRAPPC3-207ENST00000497251 PNLIPRP2P54317 469 aa15.29■□□□□ 0.04
TRAPPC3-207ENST00000497251 OCRLQ01968 901 aa15.29■□□□□ 0.04
TRAPPC3-207ENST00000497251 ERCC6LQ2NKX8 1250 aa15.29■□□□□ 0.04
TRAPPC3-207ENST00000497251 FAM111BQ6SJ93 734 aa15.29■□□□□ 0.04
TRAPPC3-207ENST00000497251 CHMP1BQ7LBR1 199 aa15.29■□□□□ 0.04
TRAPPC3-207ENST00000497251 OR52R1Q8NGF1 315 aa15.29■□□□□ 0.04
TRAPPC3-207ENST00000497251 SLC44A1Q8WWI5 657 aa15.29■□□□□ 0.04
TRAPPC3-207ENST00000497251 INTS12Q96CB8 462 aaKnown RBP15.29■□□□□ 0.04
TRAPPC3-207ENST00000497251 GIMAP4Q9NUV9 329 aa15.29■□□□□ 0.04
TRAPPC3-207ENST00000497251 ZNF226Q9NYT6 803 aa15.29■□□□□ 0.04
TRAPPC3-207ENST00000497251 MCM8Q9UJA3 840 aa15.29■□□□□ 0.04
TRAPPC3-207ENST00000497251 MAPRE3Q9UPY8 281 aa15.29■□□□□ 0.04
TRAPPC3-207ENST00000497251 WIF1Q9Y5W5 379 aa15.29■□□□□ 0.04
TRAPPC3-207ENST00000497251 TLN2Q9Y4G6 2542 aa15.28■□□□□ 0.04
TRAPPC3-207ENST00000497251 PLOD2O00469 737 aa15.28■□□□□ 0.04
TRAPPC3-207ENST00000497251 HCRTR2O43614 444 aa15.28■□□□□ 0.04
TRAPPC3-207ENST00000497251 REM1O75628 298 aa15.28■□□□□ 0.04
TRAPPC3-207ENST00000497251 SLITRK5O94991 958 aa15.28■□□□□ 0.04
TRAPPC3-207ENST00000497251 KRT6AP02538 564 aa15.28■□□□□ 0.04
TRAPPC3-207ENST00000497251 KRT6BP04259 564 aa15.28■□□□□ 0.04
TRAPPC3-207ENST00000497251 INHBBP09529 407 aa15.28■□□□□ 0.04
TRAPPC3-207ENST00000497251 KRT6CP48668 564 aa15.28■□□□□ 0.04
TRAPPC3-207ENST00000497251 LHX2P50458 406 aa15.28■□□□□ 0.04
TRAPPC3-207ENST00000497251 AGFG1P52594 562 aaKnown RBP15.28■□□□□ 0.04
TRAPPC3-207ENST00000497251 FOXF2Q12947 444 aa15.28■□□□□ 0.04
TRAPPC3-207ENST00000497251 CSTF3Q12996 717 aaKnown RBP15.28■□□□□ 0.04
TRAPPC3-207ENST00000497251 HEPACAMQ14CZ8 416 aa15.28■□□□□ 0.04
TRAPPC3-207ENST00000497251 EXOSC7Q15024 291 aaKnown RBP15.28■□□□□ 0.04
TRAPPC3-207ENST00000497251 TRMT12Q53H54 448 aaKnown RBP15.28■□□□□ 0.04
TRAPPC3-207ENST00000497251 UBAP2Q5T6F2 1119 aaKnown RBP15.28■□□□□ 0.04
TRAPPC3-207ENST00000497251 PRSS57Q6UWY2 283 aa15.28■□□□□ 0.04
TRAPPC3-207ENST00000497251 LCA5Q86VQ0 697 aa15.28■□□□□ 0.04
TRAPPC3-207ENST00000497251 GRAMD2AQ8IUY3 354 aa15.28■□□□□ 0.04
TRAPPC3-207ENST00000497251 PLD6Q8N2A8 252 aaKnown RBP15.28■□□□□ 0.04
TRAPPC3-207ENST00000497251 ADCY4Q8NFM4 1077 aa15.28■□□□□ 0.04
TRAPPC3-207ENST00000497251 ZNF483Q8TF39 744 aaPredicted RBP15.28■□□□□ 0.04
TRAPPC3-207ENST00000497251 RNF138Q8WVD3 245 aa15.28■□□□□ 0.04
TRAPPC3-207ENST00000497251 MRRFQ96E11 262 aaKnown RBP15.28■□□□□ 0.04
TRAPPC3-207ENST00000497251 CNRIP1Q96F85 164 aaPredicted RBP15.28■□□□□ 0.04
TRAPPC3-207ENST00000497251 SFXN2Q96NB2 322 aa15.28■□□□□ 0.04
TRAPPC3-207ENST00000497251 HHATLQ9HCP6 504 aa15.28■□□□□ 0.04
TRAPPC3-207ENST00000497251 GALNT9Q9HCQ5 603 aa15.28■□□□□ 0.04
TRAPPC3-207ENST00000497251 ELOVL5Q9NYP7 299 aa15.28■□□□□ 0.04
TRAPPC3-207ENST00000497251 EHD3Q9NZN3 535 aa15.28■□□□□ 0.04
TRAPPC3-207ENST00000497251 XPR1Q9UBH6 696 aa15.28■□□□□ 0.04
TRAPPC3-207ENST00000497251 ZNF180Q9UJW8 692 aa15.28■□□□□ 0.04
TRAPPC3-207ENST00000497251 UTS2RQ9UKP6 389 aa15.28■□□□□ 0.04
TRAPPC3-207ENST00000497251 STK38LQ9Y2H1 464 aa15.28■□□□□ 0.04
TRAPPC3-207ENST00000497251 HIVEP2P31629 2446 aa15.27■□□□□ 0.04
TRAPPC3-207ENST00000497251 A0A087WUV0 522 aaPredicted RBP15.27■□□□□ 0.04
TRAPPC3-207ENST00000497251 CCDC151A5D8V7 595 aa15.27■□□□□ 0.04
TRAPPC3-207ENST00000497251 PLOD3O60568 738 aa15.27■□□□□ 0.04
TRAPPC3-207ENST00000497251 PDYNP01213 254 aa15.27■□□□□ 0.04
TRAPPC3-207ENST00000497251 ABHD2P08910 425 aa15.27■□□□□ 0.04
TRAPPC3-207ENST00000497251 PEPDP12955 493 aa15.27■□□□□ 0.04
TRAPPC3-207ENST00000497251 FPR1P21462 350 aa15.27■□□□□ 0.04
TRAPPC3-207ENST00000497251 ADSLP30566 484 aaPredicted RBP15.27■□□□□ 0.04
TRAPPC3-207ENST00000497251 MPIP34949 423 aa15.27■□□□□ 0.04
TRAPPC3-207ENST00000497251 DSCR4P56555 118 aaPredicted RBP15.27■□□□□ 0.04
TRAPPC3-207ENST00000497251 NKX6-1P78426 367 aaPredicted RBP15.27■□□□□ 0.04
TRAPPC3-207ENST00000497251 SRYQ05066 204 aa15.27■□□□□ 0.04
TRAPPC3-207ENST00000497251 LTBQ06643 244 aa15.27■□□□□ 0.04
TRAPPC3-207ENST00000497251 GANABQ14697 944 aaKnown RBP15.27■□□□□ 0.04
TRAPPC3-207ENST00000497251 RASA2Q15283 850 aa15.27■□□□□ 0.04
TRAPPC3-207ENST00000497251 ZNF628Q5EBL2 1059 aa15.27■□□□□ 0.04
TRAPPC3-207ENST00000497251 SGO1Q5FBB7 561 aa15.27■□□□□ 0.04
TRAPPC3-207ENST00000497251 LGSNQ5TDP6 509 aa15.27■□□□□ 0.04
TRAPPC3-207ENST00000497251 LUZP2Q86TE4 346 aa15.27■□□□□ 0.04
TRAPPC3-207ENST00000497251 WFDC11Q8NEX6 87 aa15.27■□□□□ 0.04
TRAPPC3-207ENST00000497251 TMBIM1Q969X1 311 aa15.27■□□□□ 0.04
TRAPPC3-207ENST00000497251 NSUN5Q96P11 429 aaKnown RBP15.27■□□□□ 0.04
TRAPPC3-207ENST00000497251 PAFAH2Q99487 392 aa15.27■□□□□ 0.04
TRAPPC3-207ENST00000497251 SLC39A3Q9BRY0 314 aa15.27■□□□□ 0.04
TRAPPC3-207ENST00000497251 GSX1Q9H4S2 264 aaPredicted RBP15.27■□□□□ 0.04
TRAPPC3-207ENST00000497251 SDHAF3Q9NRP4 125 aa15.27■□□□□ 0.04
TRAPPC3-207ENST00000497251 TAS2R9Q9NYW1 312 aa15.27■□□□□ 0.04
TRAPPC3-207ENST00000497251 TESMINQ9Y4I5 508 aa15.27■□□□□ 0.04
TRAPPC3-207ENST00000497251 KIAA1549Q9HCM3 1950 aa15.27■□□□□ 0.03
TRAPPC3-207ENST00000497251 CSPG4Q6UVK1 2322 aa15.27■□□□□ 0.03
TRAPPC3-207ENST00000497251 ROS1P08922 2347 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms