RNA–Protein interactions for RNA: ENST00000496756.2

PHGDH-207, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 2

Gene PHGDH, Length 508 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-207ENST00000496756 BTN3A2P78410 334 aa12.34□□□□□ -0.43
PHGDH-207ENST00000496756 RGNQ15493 299 aa12.34□□□□□ -0.43
PHGDH-207ENST00000496756 TAF11Q15544 211 aa12.34□□□□□ -0.43
PHGDH-207ENST00000496756 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.34□□□□□ -0.43
PHGDH-207ENST00000496756 GTDC1Q4AE62 458 aa12.34□□□□□ -0.43
PHGDH-207ENST00000496756 NKAIN1Q4KMZ8 207 aa12.34□□□□□ -0.43
PHGDH-207ENST00000496756 TCTE1Q5JU00 501 aa12.34□□□□□ -0.43
PHGDH-207ENST00000496756 SLC48A1Q6P1K1 146 aa12.34□□□□□ -0.43
PHGDH-207ENST00000496756 TMEM64Q6YI46 380 aa12.34□□□□□ -0.43
PHGDH-207ENST00000496756 ZNF793Q6ZN11 406 aa12.34□□□□□ -0.43
PHGDH-207ENST00000496756 TRIM73Q86UV7 250 aa12.34□□□□□ -0.43
PHGDH-207ENST00000496756 FAM20CQ8IXL6 584 aa12.34□□□□□ -0.43
PHGDH-207ENST00000496756 ANKFN1Q8N957 763 aa12.34□□□□□ -0.43
PHGDH-207ENST00000496756 ICA1LQ8NDH6 482 aa12.34□□□□□ -0.43
PHGDH-207ENST00000496756 SFXN5Q8TD22 340 aa12.34□□□□□ -0.43
PHGDH-207ENST00000496756 UTP15Q8TED0 518 aaKnown RBP12.34□□□□□ -0.43
PHGDH-207ENST00000496756 NRG4Q8WWG1 115 aa12.34□□□□□ -0.43
PHGDH-207ENST00000496756 BTBD9Q96Q07 612 aa12.34□□□□□ -0.43
PHGDH-207ENST00000496756 BBS4Q96RK4 519 aa12.34□□□□□ -0.43
PHGDH-207ENST00000496756 BDH2Q9BUT1 245 aa12.34□□□□□ -0.43
PHGDH-207ENST00000496756 LHPPQ9H008 270 aa12.34□□□□□ -0.43
PHGDH-207ENST00000496756 TMEM38AQ9H6F2 299 aa12.34□□□□□ -0.43
PHGDH-207ENST00000496756 RPF2Q9H7B2 306 aaKnown RBP12.34□□□□□ -0.43
PHGDH-207ENST00000496756 SLC35C2Q9NQQ7 365 aa12.34□□□□□ -0.43
PHGDH-207ENST00000496756 DCAF13Q9NV06 445 aaKnown RBP12.34□□□□□ -0.43
PHGDH-207ENST00000496756 FBXL4Q9UKA2 621 aa12.34□□□□□ -0.43
PHGDH-207ENST00000496756 UTS2RQ9UKP6 389 aa12.34□□□□□ -0.43
PHGDH-207ENST00000496756 FAF1Q9UNN5 650 aaPredicted RBP12.34□□□□□ -0.43
PHGDH-207ENST00000496756 DTNAQ9Y4J8 743 aa12.34□□□□□ -0.43
PHGDH-207ENST00000496756 ZNF780BQ9Y6R6 833 aa12.34□□□□□ -0.43
PHGDH-207ENST00000496756 NAV3Q8IVL0 2385 aa12.34□□□□□ -0.43
PHGDH-207ENST00000496756 TMEM247A6NEH6 219 aa12.33□□□□□ -0.44
PHGDH-207ENST00000496756 H0YGG7 62 aa12.33□□□□□ -0.44
PHGDH-207ENST00000496756 PCDH17O14917 1159 aa12.33□□□□□ -0.44
PHGDH-207ENST00000496756 PROM1O43490 865 aa12.33□□□□□ -0.44
PHGDH-207ENST00000496756 CTSVO60911 334 aa12.33□□□□□ -0.44
PHGDH-207ENST00000496756 DEAF1O75398 565 aaPredicted RBP12.33□□□□□ -0.44
PHGDH-207ENST00000496756 BMP10O95393 424 aa12.33□□□□□ -0.44
PHGDH-207ENST00000496756 IFI6P09912 130 aa12.33□□□□□ -0.44
PHGDH-207ENST00000496756 ZNF888P0CJ79 500 aaPredicted RBP12.33□□□□□ -0.44
PHGDH-207ENST00000496756 NR2F6P10588 404 aa12.33□□□□□ -0.44
PHGDH-207ENST00000496756 CSNK2A2P19784 350 aaPredicted RBP12.33□□□□□ -0.44
PHGDH-207ENST00000496756 ATP6V1C1P21283 382 aa12.33□□□□□ -0.44
PHGDH-207ENST00000496756 PRIM2P49643 509 aa12.33□□□□□ -0.44
PHGDH-207ENST00000496756 EMP3P54852 163 aa12.33□□□□□ -0.44
PHGDH-207ENST00000496756 ARF3P61204 181 aaPredicted RBP12.33□□□□□ -0.44
PHGDH-207ENST00000496756 GNA13Q14344 377 aa12.33□□□□□ -0.44
PHGDH-207ENST00000496756 INAQ16352 499 aa12.33□□□□□ -0.44
PHGDH-207ENST00000496756 GRAMD1BQ3KR37 738 aa12.33□□□□□ -0.44
PHGDH-207ENST00000496756 SPDYE7PQ495Y7 208 aa12.33□□□□□ -0.44
PHGDH-207ENST00000496756 GCNT6Q5T4J0 391 aa12.33□□□□□ -0.44
PHGDH-207ENST00000496756 GARNL3Q5VVW2 1013 aa12.33□□□□□ -0.44
PHGDH-207ENST00000496756 ZNF324BQ6AW86 544 aaPredicted RBP12.33□□□□□ -0.44
PHGDH-207ENST00000496756 OR52E8Q6IFG1 317 aa12.33□□□□□ -0.44
PHGDH-207ENST00000496756 TMEM214Q6NUQ4 689 aaKnown RBP12.33□□□□□ -0.44
PHGDH-207ENST00000496756 TLDC1Q6P9B6 456 aa12.33□□□□□ -0.44
PHGDH-207ENST00000496756 XKRXQ6PP77 449 aa12.33□□□□□ -0.44
PHGDH-207ENST00000496756 ISLR2Q6UXK2 745 aa12.33□□□□□ -0.44
PHGDH-207ENST00000496756 CSNK1A1LQ8N752 337 aa12.33□□□□□ -0.44
PHGDH-207ENST00000496756 EME1Q96AY2 570 aa12.33□□□□□ -0.44
PHGDH-207ENST00000496756 NEURL3Q96EH8 262 aa12.33□□□□□ -0.44
PHGDH-207ENST00000496756 AURKBQ96GD4 344 aaPredicted RBP12.33□□□□□ -0.44
PHGDH-207ENST00000496756 CENPNQ96H22 339 aaPredicted RBP12.33□□□□□ -0.44
PHGDH-207ENST00000496756 POM121Q96HA1 1249 aa12.33□□□□□ -0.44
PHGDH-207ENST00000496756 CCDC120Q96HB5 630 aa12.33□□□□□ -0.44
PHGDH-207ENST00000496756 LMF1Q96S06 567 aa12.33□□□□□ -0.44
PHGDH-207ENST00000496756 PKP2Q99959 881 aa12.33□□□□□ -0.44
PHGDH-207ENST00000496756 C9orf16Q9BUW7 83 aa12.33□□□□□ -0.44
PHGDH-207ENST00000496756 KLHL25Q9H0H3 589 aa12.33□□□□□ -0.44
PHGDH-207ENST00000496756 KLHL31Q9H511 634 aa12.33□□□□□ -0.44
PHGDH-207ENST00000496756 IKZF5Q9H5V7 419 aa12.33□□□□□ -0.44
PHGDH-207ENST00000496756 SLC6A13Q9NSD5 602 aa12.33□□□□□ -0.44
PHGDH-207ENST00000496756 TEX10Q9NXF1 929 aaPredicted RBP12.33□□□□□ -0.44
PHGDH-207ENST00000496756 PLCL2Q9UPR0 1127 aa12.33□□□□□ -0.44
PHGDH-207ENST00000496756 LRCH1Q9Y2L9 728 aa12.33□□□□□ -0.44
PHGDH-207ENST00000496756 KLHL20Q9Y2M5 609 aa12.33□□□□□ -0.44
PHGDH-207ENST00000496756 TRGV8A0A0C4DH27 118 aa12.32□□□□□ -0.44
PHGDH-207ENST00000496756 RNF103-CHMP3A0A140T963 221 aa12.32□□□□□ -0.44
PHGDH-207ENST00000496756 MYO1GB0I1T2 1018 aa12.32□□□□□ -0.44
PHGDH-207ENST00000496756 H3BMH7 237 aa12.32□□□□□ -0.44
PHGDH-207ENST00000496756 CCL21O00585 134 aa12.32□□□□□ -0.44
PHGDH-207ENST00000496756 CNOT3O75175 753 aaKnown RBP12.32□□□□□ -0.44
PHGDH-207ENST00000496756 PVRP15151 417 aa12.32□□□□□ -0.44
PHGDH-207ENST00000496756 NCK1P16333 377 aa12.32□□□□□ -0.44
PHGDH-207ENST00000496756 CPN2P22792 545 aa12.32□□□□□ -0.44
PHGDH-207ENST00000496756 CERS1P27544 350 aa12.32□□□□□ -0.44
PHGDH-207ENST00000496756 PPP2R1BP30154 601 aa12.32□□□□□ -0.44
PHGDH-207ENST00000496756 GPC1P35052 558 aa12.32□□□□□ -0.44
PHGDH-207ENST00000496756 SOAT1P35610 550 aa12.32□□□□□ -0.44
PHGDH-207ENST00000496756 CRATP43155 626 aa12.32□□□□□ -0.44
PHGDH-207ENST00000496756 TDGF1P3P51864 188 aa12.32□□□□□ -0.44
PHGDH-207ENST00000496756 RAB8AP61006 207 aa12.32□□□□□ -0.44
PHGDH-207ENST00000496756 TNFRSF17Q02223 184 aa12.32□□□□□ -0.44
PHGDH-207ENST00000496756 CEBPEQ15744 281 aa12.32□□□□□ -0.44
PHGDH-207ENST00000496756 ATP6AP1Q15904 470 aa12.32□□□□□ -0.44
PHGDH-207ENST00000496756 ANGPTL8Q6UXH0 198 aa12.32□□□□□ -0.44
PHGDH-207ENST00000496756 GFRALQ6UXV0 394 aa12.32□□□□□ -0.44
PHGDH-207ENST00000496756 IZUMO2Q6UXV1 221 aa12.32□□□□□ -0.44
PHGDH-207ENST00000496756 ZZZ3Q8IYH5 903 aa12.32□□□□□ -0.44
PHGDH-207ENST00000496756 OR56A1Q8NGH5 318 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms