RNA–Protein interactions for RNA: ENST00000496205.1

CLK1-214, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 480 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-214ENST00000496205 A8MUI8 341 aa3.03□□□□□ -1.92
CLK1-214ENST00000496205 MEI4A8MW99 385 aa3.03□□□□□ -1.92
CLK1-214ENST00000496205 NEDD8-MDP1E9PL57 170 aa3.03□□□□□ -1.92
CLK1-214ENST00000496205 FBP2O00757 339 aa3.03□□□□□ -1.92
CLK1-214ENST00000496205 PRRG1O14668 218 aa3.03□□□□□ -1.92
CLK1-214ENST00000496205 XPO1O14980 1071 aaKnown RBP3.03□□□□□ -1.92
CLK1-214ENST00000496205 CASC3O15234 703 aaKnown RBP3.03□□□□□ -1.92
CLK1-214ENST00000496205 IDH3BO43837 385 aa3.03□□□□□ -1.92
CLK1-214ENST00000496205 NEMFO60524 1076 aa3.03□□□□□ -1.92
CLK1-214ENST00000496205 FRAT2O75474 233 aaPredicted RBP3.03□□□□□ -1.92
CLK1-214ENST00000496205 ERLIN1O75477 346 aa3.03□□□□□ -1.92
CLK1-214ENST00000496205 SURF6O75683 361 aaKnown RBP3.03□□□□□ -1.92
CLK1-214ENST00000496205 OAS1P00973 400 aaKnown RBP3.03□□□□□ -1.92
CLK1-214ENST00000496205 FOSL2P15408 326 aa3.03□□□□□ -1.92
CLK1-214ENST00000496205 DRD5P21918 477 aa3.03□□□□□ -1.92
CLK1-214ENST00000496205 AXLP30530 894 aa3.03□□□□□ -1.92
CLK1-214ENST00000496205 FCGR2BP31994 310 aaPredicted RBP3.03□□□□□ -1.92
CLK1-214ENST00000496205 FCGR2CP31995 323 aa3.03□□□□□ -1.92
CLK1-214ENST00000496205 ETV5P41161 510 aa3.03□□□□□ -1.92
CLK1-214ENST00000496205 ALDH3B1P43353 468 aa3.03□□□□□ -1.92
CLK1-214ENST00000496205 SLC6A8P48029 635 aa3.03□□□□□ -1.92
CLK1-214ENST00000496205 CEBPDP49716 269 aaPredicted RBP3.03□□□□□ -1.92
CLK1-214ENST00000496205 ATP4BP51164 291 aa3.03□□□□□ -1.92
CLK1-214ENST00000496205 NDUFV3P56181 108 aaKnown RBP3.03□□□□□ -1.92
CLK1-214ENST00000496205 ACTR3P61158 418 aa3.03□□□□□ -1.92
CLK1-214ENST00000496205 FKBP3Q00688 224 aaKnown RBP3.03□□□□□ -1.92
CLK1-214ENST00000496205 MYBPC1Q00872 1141 aa3.03□□□□□ -1.92
CLK1-214ENST00000496205 NAAAQ02083 359 aa3.03□□□□□ -1.92
CLK1-214ENST00000496205 TNFRSF17Q02223 184 aa3.03□□□□□ -1.92
CLK1-214ENST00000496205 CD300CQ08708 224 aa3.03□□□□□ -1.92
CLK1-214ENST00000496205 NME3Q13232 169 aa3.03□□□□□ -1.92
CLK1-214ENST00000496205 CCL14Q16627 93 aa3.03□□□□□ -1.92
CLK1-214ENST00000496205 ZSWIM7Q19AV6 140 aa3.03□□□□□ -1.92
CLK1-214ENST00000496205 ZNF699Q32M78 642 aa3.03□□□□□ -1.92
CLK1-214ENST00000496205 UNC50Q53HI1 259 aa3.03□□□□□ -1.92
CLK1-214ENST00000496205 NCR3LG1Q68D85 454 aa3.03□□□□□ -1.92
CLK1-214ENST00000496205 HIST2H2AA3Q6FI13 130 aa3.03□□□□□ -1.92
CLK1-214ENST00000496205 LUZP1Q86V48 1076 aa3.03□□□□□ -1.92
CLK1-214ENST00000496205 FAM131BQ86XD5 332 aa3.03□□□□□ -1.92
CLK1-214ENST00000496205 CCDC71Q8IV32 467 aaPredicted RBP3.03□□□□□ -1.92
CLK1-214ENST00000496205 METTL4Q8N3J2 472 aa3.03□□□□□ -1.92
CLK1-214ENST00000496205 ZNF491Q8N8L2 437 aa3.03□□□□□ -1.92
CLK1-214ENST00000496205 CCDC148Q8NFR7 591 aa3.03□□□□□ -1.92
CLK1-214ENST00000496205 OR1K1Q8NGR3 316 aa3.03□□□□□ -1.92
CLK1-214ENST00000496205 MIPOL1Q8TD10 442 aa3.03□□□□□ -1.92
CLK1-214ENST00000496205 GIPC3Q8TF64 312 aa3.03□□□□□ -1.92
CLK1-214ENST00000496205 RAB3CQ96E17 227 aa3.03□□□□□ -1.92
CLK1-214ENST00000496205 SLC41A3Q96GZ6 507 aa3.03□□□□□ -1.92
CLK1-214ENST00000496205 PSKH2Q96QS6 385 aa3.03□□□□□ -1.92
CLK1-214ENST00000496205 SECISBP2Q96T21 854 aaKnown RBP3.03□□□□□ -1.92
CLK1-214ENST00000496205 OPRPNQ99935 248 aaPredicted RBP3.03□□□□□ -1.92
CLK1-214ENST00000496205 SLC39A3Q9BRY0 314 aa3.03□□□□□ -1.92
CLK1-214ENST00000496205 WRAP53Q9BUR4 548 aaKnown RBP3.03□□□□□ -1.92
CLK1-214ENST00000496205 CAPS2Q9BXY5 557 aa3.03□□□□□ -1.92
CLK1-214ENST00000496205 MRPL13Q9BYD1 178 aaKnown RBP3.03□□□□□ -1.92
CLK1-214ENST00000496205 ACTR8Q9H981 624 aa3.03□□□□□ -1.92
CLK1-214ENST00000496205 NMUR1Q9HB89 426 aa3.03□□□□□ -1.92
CLK1-214ENST00000496205 DDX18Q9NVP1 670 aaKnown RBP3.03□□□□□ -1.92
CLK1-214ENST00000496205 HOXC10Q9NYD6 342 aa3.03□□□□□ -1.92
CLK1-214ENST00000496205 BCAP29Q9UHQ4 241 aa3.03□□□□□ -1.92
CLK1-214ENST00000496205 IKZF3Q9UKT9 509 aa3.03□□□□□ -1.92
CLK1-214ENST00000496205 TRAF3IP3Q9Y228 551 aa3.03□□□□□ -1.92
CLK1-214ENST00000496205 RNF215Q9Y6U7 377 aa3.03□□□□□ -1.92
CLK1-214ENST00000496205 CUX2O14529 1486 aa3.03□□□□□ -1.93
CLK1-214ENST00000496205 SF3B1O75533 1304 aaKnown RBP eCLIP3.02□□□□□ -1.93
CLK1-214ENST00000496205 MROH5Q6ZUA9 1318 aa3.02□□□□□ -1.93
CLK1-214ENST00000496205 A0A0U1RQV5 110 aa3.02□□□□□ -1.93
CLK1-214ENST00000496205 PALM2-AKAP2B1ALY0 433 aaPredicted RBP3.02□□□□□ -1.93
CLK1-214ENST00000496205 LGALS8O00214 317 aa3.02□□□□□ -1.93
CLK1-214ENST00000496205 TSPAN2O60636 221 aa3.02□□□□□ -1.93
CLK1-214ENST00000496205 SDC3O75056 442 aa3.02□□□□□ -1.93
CLK1-214ENST00000496205 DUSP11O75319 330 aaKnown RBP3.02□□□□□ -1.93
CLK1-214ENST00000496205 RHBDL1O75783 438 aa3.02□□□□□ -1.93
CLK1-214ENST00000496205 SLITRK3O94933 977 aa3.02□□□□□ -1.93
CLK1-214ENST00000496205 AGTP01019 485 aa3.02□□□□□ -1.93
CLK1-214ENST00000496205 FCER2P06734 321 aa3.02□□□□□ -1.93
CLK1-214ENST00000496205 ASGR1P07306 291 aa3.02□□□□□ -1.93
CLK1-214ENST00000496205 HCKP08631 526 aa3.02□□□□□ -1.93
CLK1-214ENST00000496205 IQCF3P0C7M6 154 aa3.02□□□□□ -1.93
CLK1-214ENST00000496205 CLUP10909 449 aa3.02□□□□□ -1.93
CLK1-214ENST00000496205 GP9P14770 177 aa3.02□□□□□ -1.93
CLK1-214ENST00000496205 ATP6V1C1P21283 382 aa3.02□□□□□ -1.93
CLK1-214ENST00000496205 UGT1A4P22310 534 aa3.02□□□□□ -1.93
CLK1-214ENST00000496205 CHI3L1P36222 383 aaPredicted RBP3.02□□□□□ -1.93
CLK1-214ENST00000496205 ANP32AP39687 249 aaKnown RBP3.02□□□□□ -1.93
CLK1-214ENST00000496205 NAPAP54920 295 aa3.02□□□□□ -1.93
CLK1-214ENST00000496205 TMEM50BP56557 158 aa3.02□□□□□ -1.93
CLK1-214ENST00000496205 RPL23AP62750 156 aaKnown RBP3.02□□□□□ -1.93
CLK1-214ENST00000496205 IRX1P78414 480 aaPredicted RBP3.02□□□□□ -1.93
CLK1-214ENST00000496205 FASTKD3Q14CZ7 662 aaKnown RBP3.02□□□□□ -1.93
CLK1-214ENST00000496205 SIX1Q15475 284 aaPredicted RBP3.02□□□□□ -1.93
CLK1-214ENST00000496205 MTHFSDQ2M296 383 aaKnown RBP3.02□□□□□ -1.93
CLK1-214ENST00000496205 ANKRD55Q3KP44 614 aa3.02□□□□□ -1.93
CLK1-214ENST00000496205 KCTD21Q4G0X4 260 aa3.02□□□□□ -1.93
CLK1-214ENST00000496205 TCHHL1Q5QJ38 904 aaPredicted RBP3.02□□□□□ -1.93
CLK1-214ENST00000496205 SEL1L3Q68CR1 1132 aa3.02□□□□□ -1.93
CLK1-214ENST00000496205 ZNF613Q6PF04 617 aa3.02□□□□□ -1.93
CLK1-214ENST00000496205 REG3GQ6UW15 175 aa3.02□□□□□ -1.93
CLK1-214ENST00000496205 GPR142Q7Z601 462 aa3.02□□□□□ -1.93
CLK1-214ENST00000496205 LRRTM1Q86UE6 522 aa3.02□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms