RNA–Protein interactions for RNA: ENST00000496189.1

SF3A1-209, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 693 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-209ENST00000496189 TO15178 435 aa15.05■□□□□ -0
SF3A1-209ENST00000496189 SEMA7AO75326 666 aa15.05■□□□□ -0
SF3A1-209ENST00000496189 VIMP08670 466 aaKnown RBP15.05■□□□□ -0
SF3A1-209ENST00000496189 TROVE2P10155 538 aaKnown RBP eCLIP15.05■□□□□ -0
SF3A1-209ENST00000496189 MDH1P40925 334 aaKnown RBP15.05■□□□□ -0
SF3A1-209ENST00000496189 PSMD4P55036 377 aaKnown RBP15.05■□□□□ -0
SF3A1-209ENST00000496189 AQP5P55064 265 aa15.05■□□□□ -0
SF3A1-209ENST00000496189 PRR5P85299 388 aa15.05■□□□□ -0
SF3A1-209ENST00000496189 GUCY1A3Q02108 690 aa15.05■□□□□ -0
SF3A1-209ENST00000496189 DUSP8Q13202 625 aa15.05■□□□□ -0
SF3A1-209ENST00000496189 EFR3AQ14156 821 aa15.05■□□□□ -0
SF3A1-209ENST00000496189 GSTA3Q16772 222 aa15.05■□□□□ -0
SF3A1-209ENST00000496189 LSM12Q3MHD2 195 aaKnown RBP15.05■□□□□ -0
SF3A1-209ENST00000496189 C1QL3Q5VWW1 255 aa15.05■□□□□ -0
SF3A1-209ENST00000496189 MAVSQ7Z434 540 aa15.05■□□□□ -0
SF3A1-209ENST00000496189 FJX1Q86VR8 437 aa15.05■□□□□ -0
SF3A1-209ENST00000496189 SPPL2CQ8IUH8 684 aa15.05■□□□□ -0
SF3A1-209ENST00000496189 OR2L13Q8N349 312 aa15.05■□□□□ -0
SF3A1-209ENST00000496189 KRTCAP2Q8N6L1 136 aa15.05■□□□□ -0
SF3A1-209ENST00000496189 SPPL2AQ8TCT8 520 aa15.05■□□□□ -0
SF3A1-209ENST00000496189 CIDECQ96AQ7 238 aaPredicted RBP15.05■□□□□ -0
SF3A1-209ENST00000496189 CCDC28BQ9BUN5 200 aa15.05■□□□□ -0
SF3A1-209ENST00000496189 BHLHE41Q9C0J9 482 aaPredicted RBP15.05■□□□□ -0
SF3A1-209ENST00000496189 ANKRA2Q9H9E1 313 aa15.05■□□□□ -0
SF3A1-209ENST00000496189 TCF7L2Q9NQB0 619 aa15.05■□□□□ -0
SF3A1-209ENST00000496189 AIG1Q9NVV5 245 aa15.05■□□□□ -0
SF3A1-209ENST00000496189 TUBA8Q9NY65 449 aaPredicted RBP15.05■□□□□ -0
SF3A1-209ENST00000496189 KLRF1Q9NZS2 232 aa15.05■□□□□ -0
SF3A1-209ENST00000496189 SH3BGRL2Q9UJC5 107 aa15.05■□□□□ -0
SF3A1-209ENST00000496189 SVILO95425 2214 aa15.04■□□□□ -0
SF3A1-209ENST00000496189 A0A1W2PRB8 838 aa15.04■□□□□ -0
SF3A1-209ENST00000496189 UPK1AO00322 258 aa15.04■□□□□ -0
SF3A1-209ENST00000496189 UBDO15205 165 aa15.04■□□□□ -0
SF3A1-209ENST00000496189 ABCB1P08183 1280 aaPredicted RBP15.04■□□□□ -0
SF3A1-209ENST00000496189 PTGS2P35354 604 aa15.04■□□□□ -0
SF3A1-209ENST00000496189 IDH3AP50213 366 aa15.04■□□□□ -0
SF3A1-209ENST00000496189 SNTA1Q13424 505 aa15.04■□□□□ -0
SF3A1-209ENST00000496189 SLC10A1Q14973 349 aa15.04■□□□□ -0
SF3A1-209ENST00000496189 DECR1Q16698 335 aa15.04■□□□□ -0
SF3A1-209ENST00000496189 DPY19L1Q2PZI1 675 aa15.04■□□□□ -0
SF3A1-209ENST00000496189 PGS1Q32NB8 556 aa15.04■□□□□ -0
SF3A1-209ENST00000496189 RNFT1Q5M7Z0 435 aa15.04■□□□□ -0
SF3A1-209ENST00000496189 ZNF551Q7Z340 670 aaPredicted RBP15.04■□□□□ -0
SF3A1-209ENST00000496189 RIMKLAQ8IXN7 391 aa15.04■□□□□ -0
SF3A1-209ENST00000496189 SIMC1Q8NDZ2 872 aa15.04■□□□□ -0
SF3A1-209ENST00000496189 VPS37AQ8NEZ2 397 aa15.04■□□□□ -0
SF3A1-209ENST00000496189 OR7A2PQ8NGA2 310 aa15.04■□□□□ -0
SF3A1-209ENST00000496189 TMBIM1Q969X1 311 aa15.04■□□□□ -0
SF3A1-209ENST00000496189 COQ8BQ96D53 544 aa15.04■□□□□ -0
SF3A1-209ENST00000496189 VSTM2LQ96N03 204 aa15.04■□□□□ -0
SF3A1-209ENST00000496189 RILPQ96NA2 401 aa15.04■□□□□ -0
SF3A1-209ENST00000496189 COL21A1Q96P44 957 aa15.04■□□□□ -0
SF3A1-209ENST00000496189 DEFB127Q9H1M4 99 aa15.04■□□□□ -0
SF3A1-209ENST00000496189 CCDC134Q9H6E4 229 aa15.04■□□□□ -0
SF3A1-209ENST00000496189 SH2D2AQ9NP31 389 aa15.04■□□□□ -0
SF3A1-209ENST00000496189 QPCTLQ9NXS2 382 aa15.04■□□□□ -0
SF3A1-209ENST00000496189 ERRFI1Q9UJM3 462 aaPredicted RBP15.04■□□□□ -0
SF3A1-209ENST00000496189 CNOT11Q9UKZ1 510 aaKnown RBP15.04■□□□□ -0
SF3A1-209ENST00000496189 A0A0G2JMM0 328 aa15.03■□□□□ -0
SF3A1-209ENST00000496189 A0A1W2PPB8 328 aa15.03■□□□□ -0
SF3A1-209ENST00000496189 A0A1W2PRS3 328 aa15.03■□□□□ -0
SF3A1-209ENST00000496189 OR6C70A6NIJ9 312 aa15.03■□□□□ -0
SF3A1-209ENST00000496189 KIR3DP1A8MWS1 328 aa15.03■□□□□ -0
SF3A1-209ENST00000496189 CCL21O00585 134 aa15.03■□□□□ -0
SF3A1-209ENST00000496189 CFLARO15519 480 aa15.03■□□□□ -0
SF3A1-209ENST00000496189 PDE9AO76083 593 aa15.03■□□□□ -0
SF3A1-209ENST00000496189 TPOP07202 933 aa15.03■□□□□ -0
SF3A1-209ENST00000496189 ALDOCP09972 364 aaKnown RBP15.03■□□□□ -0
SF3A1-209ENST00000496189 LAMP1P11279 417 aa15.03■□□□□ -0
SF3A1-209ENST00000496189 ELAVL4P26378 380 aaKnown RBP15.03■□□□□ -0
SF3A1-209ENST00000496189 GDF1P27539 372 aa15.03■□□□□ -0
SF3A1-209ENST00000496189 GCKP35557 465 aa15.03■□□□□ -0
SF3A1-209ENST00000496189 CASP3P42574 277 aa15.03■□□□□ -0
SF3A1-209ENST00000496189 FRKP42685 505 aaPredicted RBP15.03■□□□□ -0
SF3A1-209ENST00000496189 CA7P43166 264 aa15.03■□□□□ -0
SF3A1-209ENST00000496189 MAGEA5P43359 124 aa15.03■□□□□ -0
SF3A1-209ENST00000496189 CLK3P49761 638 aaKnown RBP15.03■□□□□ -0
SF3A1-209ENST00000496189 PRKAG1P54619 331 aa15.03■□□□□ -0
SF3A1-209ENST00000496189 STX1BP61266 288 aa15.03■□□□□ -0
SF3A1-209ENST00000496189 IRX1P78414 480 aaPredicted RBP15.03■□□□□ -0
SF3A1-209ENST00000496189 MLC1Q15049 377 aa15.03■□□□□ -0
SF3A1-209ENST00000496189 PRSS53Q2L4Q9 553 aa15.03■□□□□ -0
SF3A1-209ENST00000496189 HYAL4Q2M3T9 481 aa15.03■□□□□ -0
SF3A1-209ENST00000496189 SPDYE7PQ495Y7 208 aa15.03■□□□□ -0
SF3A1-209ENST00000496189 CYP27C1Q4G0S4 372 aa15.03■□□□□ -0
SF3A1-209ENST00000496189 ZNF385BQ569K4 471 aa15.03■□□□□ -0
SF3A1-209ENST00000496189 CMPK2Q5EBM0 449 aa15.03■□□□□ -0
SF3A1-209ENST00000496189 SLC30A6Q6NXT4 461 aa15.03■□□□□ -0
SF3A1-209ENST00000496189 CAMKMTQ7Z624 323 aa15.03■□□□□ -0
SF3A1-209ENST00000496189 TMEM251Q8N6I4 163 aa15.03■□□□□ -0
SF3A1-209ENST00000496189 GLB1L3Q8NCI6 653 aaPredicted RBP15.03■□□□□ -0
SF3A1-209ENST00000496189 NUP43Q8NFH3 380 aa15.03■□□□□ -0
SF3A1-209ENST00000496189 OR52N2Q8NGI0 321 aa15.03■□□□□ -0
SF3A1-209ENST00000496189 STON2Q8WXE9 905 aa15.03■□□□□ -0
SF3A1-209ENST00000496189 RELTQ969Z4 430 aa15.03■□□□□ -0
SF3A1-209ENST00000496189 TESCQ96BS2 214 aa15.03■□□□□ -0
SF3A1-209ENST00000496189 MS4A4EQ96PG1 132 aa15.03■□□□□ -0
SF3A1-209ENST00000496189 OR52B2Q96RD2 323 aa15.03■□□□□ -0
SF3A1-209ENST00000496189 DUSP26Q9BV47 211 aa15.03■□□□□ -0
SF3A1-209ENST00000496189 OSBPL11Q9BXB4 747 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms