RNA–Protein interactions for RNA: ENST00000496047.5

USP39-219, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 554 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-219ENST00000496047 OLR1P78380 273 aa6.49□□□□□ -1.37
USP39-219ENST00000496047 SHC2P98077 582 aa6.49□□□□□ -1.37
USP39-219ENST00000496047 COX10Q12887 443 aa6.49□□□□□ -1.37
USP39-219ENST00000496047 ZNF155Q12901 538 aaPredicted RBP6.49□□□□□ -1.37
USP39-219ENST00000496047 LSAMPQ13449 338 aa6.49□□□□□ -1.37
USP39-219ENST00000496047 C1orf61Q13536 156 aa6.49□□□□□ -1.37
USP39-219ENST00000496047 NR1D2Q14995 579 aa6.49□□□□□ -1.37
USP39-219ENST00000496047 TRAM2Q15035 370 aa6.49□□□□□ -1.37
USP39-219ENST00000496047 SYPL1Q16563 259 aa6.49□□□□□ -1.37
USP39-219ENST00000496047 ZSWIM7Q19AV6 140 aa6.49□□□□□ -1.37
USP39-219ENST00000496047 PRSS53Q2L4Q9 553 aa6.49□□□□□ -1.37
USP39-219ENST00000496047 TMEM44Q2T9K0 475 aa6.49□□□□□ -1.37
USP39-219ENST00000496047 GPR107Q5VW38 600 aa6.49□□□□□ -1.37
USP39-219ENST00000496047 FAM180BQ6P0A1 224 aa6.49□□□□□ -1.37
USP39-219ENST00000496047 FBXO42Q6P3S6 717 aa6.49□□□□□ -1.37
USP39-219ENST00000496047 DHRS4L2Q6PKH6 230 aa6.49□□□□□ -1.37
USP39-219ENST00000496047 CCDC81Q6ZN84 652 aa6.49□□□□□ -1.37
USP39-219ENST00000496047 PLEKHM3Q6ZWE6 761 aa6.49□□□□□ -1.37
USP39-219ENST00000496047 USP53Q70EK8 1073 aa6.49□□□□□ -1.37
USP39-219ENST00000496047 PRSS48Q7RTY5 328 aa6.49□□□□□ -1.37
USP39-219ENST00000496047 C11orf74Q86VG3 221 aa6.49□□□□□ -1.37
USP39-219ENST00000496047 UBALD2Q8IYN6 164 aa6.49□□□□□ -1.37
USP39-219ENST00000496047 CYP4Z2PQ8N1L4 340 aa6.49□□□□□ -1.37
USP39-219ENST00000496047 STX19Q8N4C7 294 aa6.49□□□□□ -1.37
USP39-219ENST00000496047 SLC5A8Q8N695 610 aa6.49□□□□□ -1.37
USP39-219ENST00000496047 COX18Q8N8Q8 333 aa6.49□□□□□ -1.37
USP39-219ENST00000496047 AMER3Q8N944 861 aa6.49□□□□□ -1.37
USP39-219ENST00000496047 CDRT4Q8N9R6 151 aa6.49□□□□□ -1.37
USP39-219ENST00000496047 FLVCR1-AS1Q8TAF5 88 aa6.49□□□□□ -1.37
USP39-219ENST00000496047 CNIH3Q8TBE1 160 aa6.49□□□□□ -1.37
USP39-219ENST00000496047 TEX47Q8TBZ9 253 aa6.49□□□□□ -1.37
USP39-219ENST00000496047 ZNF675Q8TD23 568 aa6.49□□□□□ -1.37
USP39-219ENST00000496047 FBLIM1Q8WUP2 373 aa6.49□□□□□ -1.37
USP39-219ENST00000496047 PATE1Q8WXA2 126 aa6.49□□□□□ -1.37
USP39-219ENST00000496047 SLC9A6Q92581 669 aa6.49□□□□□ -1.37
USP39-219ENST00000496047 SMIM10Q96HG1 83 aa6.49□□□□□ -1.37
USP39-219ENST00000496047 ZNF578Q96N58 590 aaPredicted RBP6.49□□□□□ -1.37
USP39-219ENST00000496047 STACQ99469 402 aa6.49□□□□□ -1.37
USP39-219ENST00000496047 NRTNQ99748 197 aa6.49□□□□□ -1.37
USP39-219ENST00000496047 MACROD1Q9BQ69 325 aa6.49□□□□□ -1.37
USP39-219ENST00000496047 UCK2Q9BZX2 261 aa6.49□□□□□ -1.37
USP39-219ENST00000496047 AICDAQ9GZX7 198 aa6.49□□□□□ -1.37
USP39-219ENST00000496047 TWSG1Q9GZX9 223 aa6.49□□□□□ -1.37
USP39-219ENST00000496047 RACGAP1Q9H0H5 632 aa6.49□□□□□ -1.37
USP39-219ENST00000496047 CHRDQ9H2X0 955 aa6.49□□□□□ -1.37
USP39-219ENST00000496047 NMNAT1Q9HAN9 279 aaPredicted RBP6.49□□□□□ -1.37
USP39-219ENST00000496047 PDE7BQ9NP56 450 aa6.49□□□□□ -1.37
USP39-219ENST00000496047 C14orf105Q9NVL8 296 aa6.49□□□□□ -1.37
USP39-219ENST00000496047 PILRAQ9UKJ1 303 aa6.49□□□□□ -1.37
USP39-219ENST00000496047 CES1P1Q9UKY3 287 aa6.49□□□□□ -1.37
USP39-219ENST00000496047 PLCL2Q9UPR0 1127 aa6.49□□□□□ -1.37
USP39-219ENST00000496047 SATB2Q9UPW6 733 aa6.49□□□□□ -1.37
USP39-219ENST00000496047 NAALAD2Q9Y3Q0 740 aa6.49□□□□□ -1.37
USP39-219ENST00000496047 WDR45Q9Y484 360 aa6.49□□□□□ -1.37
USP39-219ENST00000496047 EXPH5Q8NEV8 1989 aa6.49□□□□□ -1.37
USP39-219ENST00000496047 A0A1W2PRQ8 180 aa6.48□□□□□ -1.37
USP39-219ENST00000496047 C10orf142B7Z368 130 aa6.48□□□□□ -1.37
USP39-219ENST00000496047 H3BSA7 217 aa6.48□□□□□ -1.37
USP39-219ENST00000496047 M0R3G1 203 aa6.48□□□□□ -1.37
USP39-219ENST00000496047 PPM1DO15297 605 aa6.48□□□□□ -1.37
USP39-219ENST00000496047 DUX1O43812 170 aa6.48□□□□□ -1.37
USP39-219ENST00000496047 GALR3O60755 368 aaPredicted RBP6.48□□□□□ -1.37
USP39-219ENST00000496047 CTSVO60911 334 aa6.48□□□□□ -1.37
USP39-219ENST00000496047 CNOT3O75175 753 aaKnown RBP6.48□□□□□ -1.37
USP39-219ENST00000496047 STX11O75558 287 aa6.48□□□□□ -1.37
USP39-219ENST00000496047 PRKRAO75569 313 aaKnown RBP6.48□□□□□ -1.37
USP39-219ENST00000496047 GCM2O75603 506 aaPredicted RBP6.48□□□□□ -1.37
USP39-219ENST00000496047 GPR75O95800 540 aa6.48□□□□□ -1.37
USP39-219ENST00000496047 LGI1O95970 557 aa6.48□□□□□ -1.37
USP39-219ENST00000496047 BCL10O95999 233 aa6.48□□□□□ -1.37
USP39-219ENST00000496047 C1QCP02747 245 aa6.48□□□□□ -1.37
USP39-219ENST00000496047 DBIP07108 87 aaKnown RBP6.48□□□□□ -1.37
USP39-219ENST00000496047 THBS1P07996 1170 aa6.48□□□□□ -1.37
USP39-219ENST00000496047 ALPPL2P10696 532 aa6.48□□□□□ -1.37
USP39-219ENST00000496047 PVRP15151 417 aa6.48□□□□□ -1.37
USP39-219ENST00000496047 GNSP15586 552 aa6.48□□□□□ -1.37
USP39-219ENST00000496047 TYRP1P17643 537 aa6.48□□□□□ -1.37
USP39-219ENST00000496047 CBLP22681 906 aa6.48□□□□□ -1.37
USP39-219ENST00000496047 FMO3P31513 532 aa6.48□□□□□ -1.37
USP39-219ENST00000496047 CRYBA2P53672 197 aa6.48□□□□□ -1.37
USP39-219ENST00000496047 CRISP1P54107 249 aa6.48□□□□□ -1.37
USP39-219ENST00000496047 PSMD4P55036 377 aaKnown RBP6.48□□□□□ -1.37
USP39-219ENST00000496047 MAZP56270 477 aaKnown RBP6.48□□□□□ -1.37
USP39-219ENST00000496047 POU6F2P78424 691 aaPredicted RBP6.48□□□□□ -1.37
USP39-219ENST00000496047 SIM1P81133 766 aaPredicted RBP6.48□□□□□ -1.37
USP39-219ENST00000496047 ALDH6A1Q02252 535 aaKnown RBP6.48□□□□□ -1.37
USP39-219ENST00000496047 STX4Q12846 297 aa6.48□□□□□ -1.37
USP39-219ENST00000496047 PMS2P3Q13401 168 aa6.48□□□□□ -1.37
USP39-219ENST00000496047 DGCR6Q14129 220 aa6.48□□□□□ -1.37
USP39-219ENST00000496047 GPR19Q15760 415 aa6.48□□□□□ -1.37
USP39-219ENST00000496047 DUSP7Q16829 419 aa6.48□□□□□ -1.37
USP39-219ENST00000496047 ARHGAP11BQ3KRB8 267 aa6.48□□□□□ -1.37
USP39-219ENST00000496047 C14orf28Q4W4Y0 310 aa6.48□□□□□ -1.37
USP39-219ENST00000496047 ZNF542PQ5EBM4 170 aa6.48□□□□□ -1.37
USP39-219ENST00000496047 CHCHD2P9Q5T1J5 151 aaPredicted RBP6.48□□□□□ -1.37
USP39-219ENST00000496047 CWF19L1Q69YN2 538 aaKnown RBP6.48□□□□□ -1.37
USP39-219ENST00000496047 FRMPD2BQ6IN97 320 aa6.48□□□□□ -1.37
USP39-219ENST00000496047 MFSD12Q6NUT3 480 aa6.48□□□□□ -1.37
USP39-219ENST00000496047 PTCHD4Q6ZW05 846 aa6.48□□□□□ -1.37
USP39-219ENST00000496047 B3GNT8Q7Z7M8 397 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms