RNA–Protein interactions for RNA: ENST00000495835.1

HLA-C-209, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,073 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-209ENST00000495835 C15orf38-AP3S2A0A0A6YYH1 394 aa22.13■■□□□ 1.13
HLA-C-209ENST00000495835 SNPHO15079 494 aa22.13■■□□□ 1.13
HLA-C-209ENST00000495835 SEC22BO75396 215 aa22.13■■□□□ 1.13
HLA-C-209ENST00000495835 MSX1P28360 303 aa22.13■■□□□ 1.13
HLA-C-209ENST00000495835 KRT20P35900 424 aa22.13■■□□□ 1.13
HLA-C-209ENST00000495835 PTGDSP41222 190 aa22.13■■□□□ 1.13
HLA-C-209ENST00000495835 PNLIPRP2P54317 469 aa22.13■■□□□ 1.13
HLA-C-209ENST00000495835 IFFO1Q0D2I5 559 aa22.13■■□□□ 1.13
HLA-C-209ENST00000495835 MEX3BQ6ZN04 569 aaKnown RBP22.13■■□□□ 1.13
HLA-C-209ENST00000495835 OR7G2Q8NG99 324 aa22.13■■□□□ 1.13
HLA-C-209ENST00000495835 TMBIM1Q969X1 311 aa22.13■■□□□ 1.13
HLA-C-209ENST00000495835 FOLH1BQ9HBA9 442 aa22.13■■□□□ 1.13
HLA-C-209ENST00000495835 ALKBH4Q9NXW9 302 aa22.13■■□□□ 1.13
HLA-C-209ENST00000495835 KLRF1Q9NZS2 232 aa22.13■■□□□ 1.13
HLA-C-209ENST00000495835 POLR3HQ9Y535 204 aaPredicted RBP22.13■■□□□ 1.13
HLA-C-209ENST00000495835 A0A0G2JNJ9 132 aa22.12■■□□□ 1.13
HLA-C-209ENST00000495835 PRAMEF25A6NGN4 478 aa22.12■■□□□ 1.13
HLA-C-209ENST00000495835 HSPB2A8KAH6 182 aa22.12■■□□□ 1.13
HLA-C-209ENST00000495835 GNB5O14775 395 aa22.12■■□□□ 1.13
HLA-C-209ENST00000495835 NPHS1O60500 1241 aa22.12■■□□□ 1.13
HLA-C-209ENST00000495835 TSPAN2O60636 221 aa22.12■■□□□ 1.13
HLA-C-209ENST00000495835 REM1O75628 298 aa22.12■■□□□ 1.13
HLA-C-209ENST00000495835 EPPINO95925 133 aa22.12■■□□□ 1.13
HLA-C-209ENST00000495835 NTSP30990 170 aa22.12■■□□□ 1.13
HLA-C-209ENST00000495835 HSPB2Q16082 182 aa22.12■■□□□ 1.13
HLA-C-209ENST00000495835 SLC25A35Q3KQZ1 300 aa22.12■■□□□ 1.13
HLA-C-209ENST00000495835 ANGPTL8Q6UXH0 198 aa22.12■■□□□ 1.13
HLA-C-209ENST00000495835 OR2W6PQ8NHA6 318 aa22.12■■□□□ 1.13
HLA-C-209ENST00000495835 AENQ8WTP8 325 aaKnown RBP22.12■■□□□ 1.13
HLA-C-209ENST00000495835 FCRL1Q96LA6 429 aa22.12■■□□□ 1.13
HLA-C-209ENST00000495835 LRTM1Q9HBL6 345 aa22.12■■□□□ 1.13
HLA-C-209ENST00000495835 EML4Q9HC35 981 aaKnown RBP22.12■■□□□ 1.13
HLA-C-209ENST00000495835 Q9UFV3 132 aa22.12■■□□□ 1.13
HLA-C-209ENST00000495835 C19orf53Q9UNZ5 99 aaPredicted RBP22.12■■□□□ 1.13
HLA-C-209ENST00000495835 TMED5Q9Y3A6 229 aa22.12■■□□□ 1.13
HLA-C-209ENST00000495835 CSMD1Q96PZ7 3565 aa22.12■■□□□ 1.13
HLA-C-209ENST00000495835 PDZD2O15018 2839 aa22.12■■□□□ 1.13
HLA-C-209ENST00000495835 TTC36A6NLP5 189 aa22.11■■□□□ 1.13
HLA-C-209ENST00000495835 TBX19O60806 448 aa22.11■■□□□ 1.13
HLA-C-209ENST00000495835 ACTL6AO96019 429 aa22.11■■□□□ 1.13
HLA-C-209ENST00000495835 CAPN3P20807 821 aa22.11■■□□□ 1.13
HLA-C-209ENST00000495835 GCKP35557 465 aa22.11■■□□□ 1.13
HLA-C-209ENST00000495835 NCBP2P52298 156 aaKnown RBP eCLIP22.11■■□□□ 1.13
HLA-C-209ENST00000495835 CYP27C1Q4G0S4 372 aa22.11■■□□□ 1.13
HLA-C-209ENST00000495835 CLEC6AQ6EIG7 209 aa22.11■■□□□ 1.13
HLA-C-209ENST00000495835 Q6ZSR9 355 aa22.11■■□□□ 1.13
HLA-C-209ENST00000495835 CLYBLQ8N0X4 340 aa22.11■■□□□ 1.13
HLA-C-209ENST00000495835 CDC26Q8NHZ8 85 aa22.11■■□□□ 1.13
HLA-C-209ENST00000495835 RNF138Q8WVD3 245 aa22.11■■□□□ 1.13
HLA-C-209ENST00000495835 CAVIN3Q969G5 261 aa22.11■■□□□ 1.13
HLA-C-209ENST00000495835 CCT7Q99832 543 aa22.11■■□□□ 1.13
HLA-C-209ENST00000495835 UCK2Q9BZX2 261 aa22.11■■□□□ 1.13
HLA-C-209ENST00000495835 ANKRA2Q9H9E1 313 aa22.11■■□□□ 1.13
HLA-C-209ENST00000495835 MRPS18CQ9Y3D5 142 aaKnown RBP22.11■■□□□ 1.13
HLA-C-209ENST00000495835 NKX2-6A6NCS4 301 aa22.1■■□□□ 1.13
HLA-C-209ENST00000495835 FAM90A27PA6NNH2 459 aa22.1■■□□□ 1.13
HLA-C-209ENST00000495835 JUNP05412 331 aaKnown RBP22.1■■□□□ 1.13
HLA-C-209ENST00000495835 IL12BP29460 328 aa22.1■■□□□ 1.13
HLA-C-209ENST00000495835 TIMP3P35625 211 aa22.1■■□□□ 1.13
HLA-C-209ENST00000495835 SERPINB5P36952 375 aa22.1■■□□□ 1.13
HLA-C-209ENST00000495835 TOMM20Q15388 145 aa22.1■■□□□ 1.13
HLA-C-209ENST00000495835 KANK2Q63ZY3 851 aa22.1■■□□□ 1.13
HLA-C-209ENST00000495835 LACC1Q8IV20 430 aa22.1■■□□□ 1.13
HLA-C-209ENST00000495835 INTS1Q8N201 2190 aaKnown RBP22.1■■□□□ 1.13
HLA-C-209ENST00000495835 OR2L13Q8N349 312 aa22.1■■□□□ 1.13
HLA-C-209ENST00000495835 FAM83FQ8NEG4 500 aaPredicted RBP22.1■■□□□ 1.13
HLA-C-209ENST00000495835 LURAP1Q96LR2 239 aa22.1■■□□□ 1.13
HLA-C-209ENST00000495835 AMDHD1Q96NU7 426 aa22.1■■□□□ 1.13
HLA-C-209ENST00000495835 ADOQ96SZ5 270 aa22.1■■□□□ 1.13
HLA-C-209ENST00000495835 TMEM109Q9BVC6 243 aa22.1■■□□□ 1.13
HLA-C-209ENST00000495835 GLIPR2Q9H4G4 154 aa22.1■■□□□ 1.13
HLA-C-209ENST00000495835 NPDC1Q9NQX5 325 aaPredicted RBP22.1■■□□□ 1.13
HLA-C-209ENST00000495835 DNAJC15Q9Y5T4 150 aa22.1■■□□□ 1.13
HLA-C-209ENST00000495835 SLU7O95391 586 aaKnown RBP22.09■■□□□ 1.13
HLA-C-209ENST00000495835 PSMG1O95456 288 aa22.09■■□□□ 1.13
HLA-C-209ENST00000495835 ALDH3A1P30838 453 aa22.09■■□□□ 1.13
HLA-C-209ENST00000495835 ADH7P40394 386 aa22.09■■□□□ 1.13
HLA-C-209ENST00000495835 CORO7P57737 925 aa22.09■■□□□ 1.13
HLA-C-209ENST00000495835 PSG6Q00889 435 aa22.09■■□□□ 1.13
HLA-C-209ENST00000495835 PRSS53Q2L4Q9 553 aa22.09■■□□□ 1.13
HLA-C-209ENST00000495835 DESI1Q6ICB0 168 aa22.09■■□□□ 1.13
HLA-C-209ENST00000495835 NPSR1Q6W5P4 371 aa22.09■■□□□ 1.13
HLA-C-209ENST00000495835 LARP4Q71RC2 724 aaKnown RBP eCLIP22.09■■□□□ 1.132e-6■■■□□ 15.2
HLA-C-209ENST00000495835 PLCZ1Q86YW0 608 aa22.09■■□□□ 1.13
HLA-C-209ENST00000495835 SLC44A2Q8IWA5 706 aaPredicted RBP22.09■■□□□ 1.13
HLA-C-209ENST00000495835 DMRTC2Q8IXT2 367 aaPredicted RBP22.09■■□□□ 1.13
HLA-C-209ENST00000495835 WDSUB1Q8N9V3 476 aa22.09■■□□□ 1.13
HLA-C-209ENST00000495835 ABTB1Q969K4 478 aaPredicted RBP22.09■■□□□ 1.13
HLA-C-209ENST00000495835 ELP4Q96EB1 424 aa22.09■■□□□ 1.13
HLA-C-209ENST00000495835 FAM111AQ96PZ2 611 aa22.09■■□□□ 1.13
HLA-C-209ENST00000495835 UGT2B28Q9BY64 529 aa22.09■■□□□ 1.13
HLA-C-209ENST00000495835 OR2B2Q9GZK3 357 aa22.09■■□□□ 1.13
HLA-C-209ENST00000495835 GALNT9Q9HCQ5 603 aa22.09■■□□□ 1.13
HLA-C-209ENST00000495835 OR10H1Q9Y4A9 318 aa22.09■■□□□ 1.13
HLA-C-209ENST00000495835 BMP7P18075 431 aa22.08■■□□□ 1.13
HLA-C-209ENST00000495835 CEACAM8P31997 349 aaPredicted RBP22.08■■□□□ 1.13
HLA-C-209ENST00000495835 PEX19P40855 299 aa22.08■■□□□ 1.13
HLA-C-209ENST00000495835 ACSF3Q4G176 576 aaPredicted RBP22.08■■□□□ 1.13
HLA-C-209ENST00000495835 NSUN5P2Q63ZY6 315 aa22.08■■□□□ 1.13
HLA-C-209ENST00000495835 MREGQ8N565 214 aa22.08■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms