RNA–Protein interactions for RNA: ENST00000495172.1

GARNL3-219, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 737 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-219ENST00000495172 TRPV3Q8NET8 790 aa7.76□□□□□ -1.17
GARNL3-219ENST00000495172 OR52N5Q8NH56 324 aa7.76□□□□□ -1.17
GARNL3-219ENST00000495172 ACTL9Q8TC94 416 aa7.76□□□□□ -1.17
GARNL3-219ENST00000495172 SLC5A11Q8WWX8 675 aa7.76□□□□□ -1.17
GARNL3-219ENST00000495172 DVL3Q92997 716 aaPredicted RBP7.76□□□□□ -1.17
GARNL3-219ENST00000495172 MRFAP1L1Q96HT8 127 aa7.76□□□□□ -1.17
GARNL3-219ENST00000495172 INPP5KQ9BT40 448 aa7.76□□□□□ -1.17
GARNL3-219ENST00000495172 SORBS1Q9BX66 1292 aaKnown RBP7.76□□□□□ -1.17
GARNL3-219ENST00000495172 STMN4Q9H169 189 aaPredicted RBP7.76□□□□□ -1.17
GARNL3-219ENST00000495172 LRRC40Q9H9A6 602 aa7.76□□□□□ -1.17
GARNL3-219ENST00000495172 SNX15Q9NRS6 342 aa7.76□□□□□ -1.17
GARNL3-219ENST00000495172 PRSS50Q9UI38 385 aa7.76□□□□□ -1.17
GARNL3-219ENST00000495172 KLHL21Q9UJP4 597 aa7.76□□□□□ -1.17
GARNL3-219ENST00000495172 CORO1CQ9ULV4 474 aaPredicted RBP7.76□□□□□ -1.17
GARNL3-219ENST00000495172 TSC22D4Q9Y3Q8 395 aa7.76□□□□□ -1.17
GARNL3-219ENST00000495172 TRAF6Q9Y4K3 522 aa7.76□□□□□ -1.17
GARNL3-219ENST00000495172 SNX8Q9Y5X2 465 aa7.76□□□□□ -1.17
GARNL3-219ENST00000495172 GLOD5A6NK44 160 aa7.75□□□□□ -1.17
GARNL3-219ENST00000495172 EIF1AYO14602 144 aaKnown RBP7.75□□□□□ -1.17
GARNL3-219ENST00000495172 NME6O75414 186 aaPredicted RBP7.75□□□□□ -1.17
GARNL3-219ENST00000495172 PPM1BO75688 479 aa7.75□□□□□ -1.17
GARNL3-219ENST00000495172 SNUPNO95149 360 aaKnown RBP7.75□□□□□ -1.17
GARNL3-219ENST00000495172 TPM2P07951 284 aa7.75□□□□□ -1.17
GARNL3-219ENST00000495172 IFNGR1P15260 489 aa7.75□□□□□ -1.17
GARNL3-219ENST00000495172 HK1P19367 917 aa7.75□□□□□ -1.17
GARNL3-219ENST00000495172 ARNTP27540 789 aa7.75□□□□□ -1.17
GARNL3-219ENST00000495172 NMBRP28336 390 aa7.75□□□□□ -1.17
GARNL3-219ENST00000495172 DEKP35659 375 aaKnown RBP7.75□□□□□ -1.17
GARNL3-219ENST00000495172 GGT5P36269 586 aa7.75□□□□□ -1.17
GARNL3-219ENST00000495172 IGLV3-21P80748 117 aaPredicted RBP7.75□□□□□ -1.17
GARNL3-219ENST00000495172 ZP4Q12836 540 aa7.75□□□□□ -1.17
GARNL3-219ENST00000495172 BAMBIQ13145 260 aa7.75□□□□□ -1.17
GARNL3-219ENST00000495172 LAPTM4AQ15012 233 aa7.75□□□□□ -1.17
GARNL3-219ENST00000495172 ACAP2Q15057 778 aa7.75□□□□□ -1.17
GARNL3-219ENST00000495172 ZNF628Q5EBL2 1059 aa7.75□□□□□ -1.17
GARNL3-219ENST00000495172 C18orf63Q68DL7 685 aa7.75□□□□□ -1.17
GARNL3-219ENST00000495172 UGT3A1Q6NUS8 523 aa7.75□□□□□ -1.17
GARNL3-219ENST00000495172 ZNF549Q6P9A3 640 aa7.75□□□□□ -1.17
GARNL3-219ENST00000495172 UBE3DQ7Z6J8 389 aa7.75□□□□□ -1.17
GARNL3-219ENST00000495172 HSCBQ8IWL3 235 aa7.75□□□□□ -1.17
GARNL3-219ENST00000495172 SPATA6LQ8N4H0 392 aa7.75□□□□□ -1.17
GARNL3-219ENST00000495172 METTL25Q8N6Q8 603 aa7.75□□□□□ -1.17
GARNL3-219ENST00000495172 OMA1Q96E52 524 aa7.75□□□□□ -1.17
GARNL3-219ENST00000495172 RBM18Q96H35 190 aaKnown RBP7.75□□□□□ -1.17
GARNL3-219ENST00000495172 RADILQ96JH8 1075 aa7.75□□□□□ -1.17
GARNL3-219ENST00000495172 F2RL3Q96RI0 385 aa7.75□□□□□ -1.17
GARNL3-219ENST00000495172 SERINC2Q96SA4 455 aa7.75□□□□□ -1.17
GARNL3-219ENST00000495172 NPAS1Q99742 590 aa7.75□□□□□ -1.17
GARNL3-219ENST00000495172 HDHD5Q9BXW7 423 aa7.75□□□□□ -1.17
GARNL3-219ENST00000495172 DSN1Q9H410 356 aa7.75□□□□□ -1.17
GARNL3-219ENST00000495172 G6PC2Q9NQR9 355 aa7.75□□□□□ -1.17
GARNL3-219ENST00000495172 PRDM7Q9NQW5 492 aa7.75□□□□□ -1.17
GARNL3-219ENST00000495172 ASIC3Q9UHC3 531 aa7.75□□□□□ -1.17
GARNL3-219ENST00000495172 TCAF1Q9Y4C2 921 aa7.75□□□□□ -1.17
GARNL3-219ENST00000495172 ATP6V1G2-DDX39BF2Z307 99 aa7.74□□□□□ -1.17
GARNL3-219ENST00000495172 GOLGA8MH3BSY2 632 aa7.74□□□□□ -1.17
GARNL3-219ENST00000495172 TIMM23O14925 209 aa7.74□□□□□ -1.17
GARNL3-219ENST00000495172 CXCL13O43927 109 aa7.74□□□□□ -1.17
GARNL3-219ENST00000495172 PPP1R3DO95685 299 aa7.74□□□□□ -1.17
GARNL3-219ENST00000495172 MPIG6BO95866 241 aa7.74□□□□□ -1.17
GARNL3-219ENST00000495172 RHOXF2BP0C7M4 288 aa7.74□□□□□ -1.17
GARNL3-219ENST00000495172 DHRS4L1P0CG22 281 aa7.74□□□□□ -1.17
GARNL3-219ENST00000495172 MPC1LP0DKB6 136 aa7.74□□□□□ -1.17
GARNL3-219ENST00000495172 ALOX15P16050 662 aaPredicted RBP7.74□□□□□ -1.17
GARNL3-219ENST00000495172 KRT15P19012 456 aa7.74□□□□□ -1.17
GARNL3-219ENST00000495172 APOBEC3AP31941 199 aaPredicted RBP7.74□□□□□ -1.17
GARNL3-219ENST00000495172 PGGT1BP53609 377 aa7.74□□□□□ -1.17
GARNL3-219ENST00000495172 GDF10P55107 478 aa7.74□□□□□ -1.17
GARNL3-219ENST00000495172 EIF3EP60228 445 aaKnown RBP7.74□□□□□ -1.17
GARNL3-219ENST00000495172 STXBP1P61764 594 aaKnown RBP7.74□□□□□ -1.17
GARNL3-219ENST00000495172 RELBQ01201 579 aa7.74□□□□□ -1.17
GARNL3-219ENST00000495172 TNFRSF17Q02223 184 aa7.74□□□□□ -1.17
GARNL3-219ENST00000495172 ITGADQ13349 1161 aa7.74□□□□□ -1.17
GARNL3-219ENST00000495172 RIN1Q13671 783 aa7.74□□□□□ -1.17
GARNL3-219ENST00000495172 SLC9A3R2Q15599 337 aa7.74□□□□□ -1.17
GARNL3-219ENST00000495172 OXLD1Q5BKU9 147 aa7.74□□□□□ -1.17
GARNL3-219ENST00000495172 HLA-DQA1Q5Y7H0 255 aa7.74□□□□□ -1.17
GARNL3-219ENST00000495172 ZNF544Q6NX49 715 aa7.74□□□□□ -1.17
GARNL3-219ENST00000495172 GALNT10Q86SR1 603 aa7.74□□□□□ -1.17
GARNL3-219ENST00000495172 LRRC6Q86X45 466 aa7.74□□□□□ -1.17
GARNL3-219ENST00000495172 TUSC5Q8IXB3 177 aa7.74□□□□□ -1.17
GARNL3-219ENST00000495172 TBC1D19Q8N5T2 526 aa7.74□□□□□ -1.17
GARNL3-219ENST00000495172 FAM71DQ8N9W8 422 aa7.74□□□□□ -1.17
GARNL3-219ENST00000495172 ABHD3Q8WU67 409 aa7.74□□□□□ -1.17
GARNL3-219ENST00000495172 ATG4AQ8WYN0 398 aa7.74□□□□□ -1.17
GARNL3-219ENST00000495172 HAUS8Q9BT25 410 aa7.74□□□□□ -1.17
GARNL3-219ENST00000495172 SAP130Q9H0E3 1048 aa7.74□□□□□ -1.17
GARNL3-219ENST00000495172 FANCFQ9NPI8 374 aa7.74□□□□□ -1.17
GARNL3-219ENST00000495172 SMYD2Q9NRG4 433 aa7.74□□□□□ -1.17
GARNL3-219ENST00000495172 DMGDHQ9UI17 866 aaKnown RBP7.74□□□□□ -1.17
GARNL3-219ENST00000495172 MYO6Q9UM54 1294 aa7.74□□□□□ -1.17
GARNL3-219ENST00000495172 ICAM5Q9UMF0 924 aa7.74□□□□□ -1.17
GARNL3-219ENST00000495172 ATP6V1DQ9Y5K8 247 aa7.74□□□□□ -1.17
GARNL3-219ENST00000495172 GOLGA8QA0A0J9YX86 632 aa7.73□□□□□ -1.17
GARNL3-219ENST00000495172 GOLGA8OA6NCC3 632 aa7.73□□□□□ -1.17
GARNL3-219ENST00000495172 C9JVG2 144 aa7.73□□□□□ -1.17
GARNL3-219ENST00000495172 GOLGA8NF8WBI6 632 aa7.73□□□□□ -1.17
GARNL3-219ENST00000495172 GOLGA8RI6L899 631 aa7.73□□□□□ -1.17
GARNL3-219ENST00000495172 SAP18O00422 153 aaKnown RBP7.73□□□□□ -1.17
GARNL3-219ENST00000495172 FRS3O43559 492 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms