RNA–Protein interactions for RNA: ENST00000494728.5

VTI1A-208, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 463 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-208ENST00000494728 ACSM2BQ68CK6 577 aa10.59□□□□□ -0.71
VTI1A-208ENST00000494728 OR5M10Q6IEU7 315 aa10.59□□□□□ -0.71
VTI1A-208ENST00000494728 GALNT18Q6P9A2 607 aa10.59□□□□□ -0.71
VTI1A-208ENST00000494728 NUP54Q7Z3B4 507 aa10.59□□□□□ -0.71
VTI1A-208ENST00000494728 IFT20Q8IY31 132 aa10.59□□□□□ -0.71
VTI1A-208ENST00000494728 GBP7Q8N8V2 638 aaPredicted RBP10.59□□□□□ -0.71
VTI1A-208ENST00000494728 MBD3L2Q8NHZ7 208 aaPredicted RBP10.59□□□□□ -0.71
VTI1A-208ENST00000494728 CDC26Q8NHZ8 85 aa10.59□□□□□ -0.71
VTI1A-208ENST00000494728 PUM2Q8TB72 1066 aaKnown RBP eCLIP10.59□□□□□ -0.71
VTI1A-208ENST00000494728 ABTB1Q969K4 478 aaPredicted RBP10.59□□□□□ -0.71
VTI1A-208ENST00000494728 EFHD2Q96C19 240 aaPredicted RBP10.59□□□□□ -0.71
VTI1A-208ENST00000494728 ADOQ96SZ5 270 aa10.59□□□□□ -0.71
VTI1A-208ENST00000494728 TUBA1CQ9BQE3 449 aa10.59□□□□□ -0.71
VTI1A-208ENST00000494728 OR2B2Q9GZK3 357 aa10.59□□□□□ -0.71
VTI1A-208ENST00000494728 MID1IP1Q9NPA3 183 aa10.59□□□□□ -0.71
VTI1A-208ENST00000494728 PFDN4Q9NQP4 134 aa10.59□□□□□ -0.71
VTI1A-208ENST00000494728 SLC35C2Q9NQQ7 365 aa10.59□□□□□ -0.71
VTI1A-208ENST00000494728 CFL2Q9Y281 166 aa10.59□□□□□ -0.71
VTI1A-208ENST00000494728 OR6C70A6NIJ9 312 aa10.58□□□□□ -0.72
VTI1A-208ENST00000494728 CD8B2A6NJW9 211 aa10.58□□□□□ -0.72
VTI1A-208ENST00000494728 HSPB2A8KAH6 182 aa10.58□□□□□ -0.72
VTI1A-208ENST00000494728 AHRRA9YTQ3 701 aa10.58□□□□□ -0.72
VTI1A-208ENST00000494728 DVL2O14641 736 aa10.58□□□□□ -0.72
VTI1A-208ENST00000494728 ERN1O75460 977 aaKnown RBP10.58□□□□□ -0.72
VTI1A-208ENST00000494728 ENO1P06733 434 aaKnown RBP10.58□□□□□ -0.72
VTI1A-208ENST00000494728 ANXA4P09525 319 aaPredicted RBP10.58□□□□□ -0.72
VTI1A-208ENST00000494728 DRD2P14416 443 aa10.58□□□□□ -0.72
VTI1A-208ENST00000494728 TACR1P25103 407 aa10.58□□□□□ -0.72
VTI1A-208ENST00000494728 TIMP3P35625 211 aa10.58□□□□□ -0.72
VTI1A-208ENST00000494728 MC3RP41968 323 aa10.58□□□□□ -0.72
VTI1A-208ENST00000494728 STARP49675 285 aa10.58□□□□□ -0.72
VTI1A-208ENST00000494728 IST1P53990 364 aa10.58□□□□□ -0.72
VTI1A-208ENST00000494728 PKNOX1P55347 436 aa10.58□□□□□ -0.72
VTI1A-208ENST00000494728 GFRA1P56159 465 aa10.58□□□□□ -0.72
VTI1A-208ENST00000494728 RPP38P78345 283 aaKnown RBP10.58□□□□□ -0.72
VTI1A-208ENST00000494728 HSPB2Q16082 182 aa10.58□□□□□ -0.72
VTI1A-208ENST00000494728 FBXL19-AS1Q494R0 122 aa10.58□□□□□ -0.72
VTI1A-208ENST00000494728 LGSNQ5TDP6 509 aa10.58□□□□□ -0.72
VTI1A-208ENST00000494728 SLC30A6Q6NXT4 461 aa10.58□□□□□ -0.72
VTI1A-208ENST00000494728 ZYG11AQ6WRX3 759 aa10.58□□□□□ -0.72
VTI1A-208ENST00000494728 FRMD7Q6ZUT3 714 aa10.58□□□□□ -0.72
VTI1A-208ENST00000494728 LCA5Q86VQ0 697 aa10.58□□□□□ -0.72
VTI1A-208ENST00000494728 SLC22A9Q8IVM8 553 aa10.58□□□□□ -0.72
VTI1A-208ENST00000494728 CCNYL1Q8N7R7 359 aa10.58□□□□□ -0.72
VTI1A-208ENST00000494728 ACMSDQ8TDX5 336 aa10.58□□□□□ -0.72
VTI1A-208ENST00000494728 SLC35A4Q96G79 324 aa10.58□□□□□ -0.72
VTI1A-208ENST00000494728 COL21A1Q96P44 957 aa10.58□□□□□ -0.72
VTI1A-208ENST00000494728 SHCBP1LQ9BZQ2 653 aa10.58□□□□□ -0.72
VTI1A-208ENST00000494728 RTN4RQ9BZR6 473 aa10.58□□□□□ -0.72
VTI1A-208ENST00000494728 NMRK1Q9NWW6 199 aa10.58□□□□□ -0.72
VTI1A-208ENST00000494728 PRODH2Q9UF12 536 aa10.58□□□□□ -0.72
VTI1A-208ENST00000494728 FETUBQ9UGM5 382 aa10.58□□□□□ -0.72
VTI1A-208ENST00000494728 CBLCQ9ULV8 474 aa10.58□□□□□ -0.72
VTI1A-208ENST00000494728 POLR3HQ9Y535 204 aaPredicted RBP10.58□□□□□ -0.72
VTI1A-208ENST00000494728 WIF1Q9Y5W5 379 aa10.58□□□□□ -0.72
VTI1A-208ENST00000494728 HEATR5AQ86XA9 2040 aa10.57□□□□□ -0.72
VTI1A-208ENST00000494728 SERTM1A2A2V5 107 aa10.57□□□□□ -0.72
VTI1A-208ENST00000494728 FAM221AA4D161 298 aa10.57□□□□□ -0.72
VTI1A-208ENST00000494728 SMIM23A6NLE4 172 aa10.57□□□□□ -0.72
VTI1A-208ENST00000494728 MYO1GB0I1T2 1018 aa10.57□□□□□ -0.72
VTI1A-208ENST00000494728 FAM47E-STBD1D6RA91 191 aa10.57□□□□□ -0.72
VTI1A-208ENST00000494728 SYT5O00445 386 aa10.57□□□□□ -0.72
VTI1A-208ENST00000494728 PLIN3O60664 434 aa10.57□□□□□ -0.72
VTI1A-208ENST00000494728 GLRA3O75311 464 aa10.57□□□□□ -0.72
VTI1A-208ENST00000494728 REM1O75628 298 aa10.57□□□□□ -0.72
VTI1A-208ENST00000494728 PSMG1O95456 288 aa10.57□□□□□ -0.72
VTI1A-208ENST00000494728 JUNP05412 331 aaKnown RBP10.57□□□□□ -0.72
VTI1A-208ENST00000494728 GSTA1P08263 222 aa10.57□□□□□ -0.72
VTI1A-208ENST00000494728 CYP4B1P13584 511 aa10.57□□□□□ -0.72
VTI1A-208ENST00000494728 KIR2DL3P43628 341 aa10.57□□□□□ -0.72
VTI1A-208ENST00000494728 LHX2P50458 406 aa10.57□□□□□ -0.72
VTI1A-208ENST00000494728 ART1P52961 327 aa10.57□□□□□ -0.72
VTI1A-208ENST00000494728 CLDN18P56856 261 aa10.57□□□□□ -0.72
VTI1A-208ENST00000494728 B3GALT5-AS1P59052 145 aa10.57□□□□□ -0.72
VTI1A-208ENST00000494728 DCAF7P61962 342 aa10.57□□□□□ -0.72
VTI1A-208ENST00000494728 PSG6Q00889 435 aa10.57□□□□□ -0.72
VTI1A-208ENST00000494728 ZNF763Q0D2J5 394 aa10.57□□□□□ -0.72
VTI1A-208ENST00000494728 ZNF155Q12901 538 aaPredicted RBP10.57□□□□□ -0.72
VTI1A-208ENST00000494728 SNTA1Q13424 505 aa10.57□□□□□ -0.72
VTI1A-208ENST00000494728 FLYWCH1Q4VC44 716 aa10.57□□□□□ -0.72
VTI1A-208ENST00000494728 CES4AQ5XG92 561 aa10.57□□□□□ -0.72
VTI1A-208ENST00000494728 FAM71E1Q6IPT2 247 aa10.57□□□□□ -0.72
VTI1A-208ENST00000494728 TMEM107Q6UX40 140 aa10.57□□□□□ -0.72
VTI1A-208ENST00000494728 ADGRE4PQ86SQ3 457 aa10.57□□□□□ -0.72
VTI1A-208ENST00000494728 PM20D2Q8IYS1 436 aa10.57□□□□□ -0.72
VTI1A-208ENST00000494728 FAM9CQ8IZT9 166 aa10.57□□□□□ -0.72
VTI1A-208ENST00000494728 CEP112Q8N8E3 955 aa10.57□□□□□ -0.72
VTI1A-208ENST00000494728 KIF18AQ8NI77 898 aa10.57□□□□□ -0.72
VTI1A-208ENST00000494728 EPS8L3Q8TE67 593 aaKnown RBP10.57□□□□□ -0.72
VTI1A-208ENST00000494728 RNASE6Q93091 150 aaKnown RBP10.57□□□□□ -0.72
VTI1A-208ENST00000494728 SIRT5Q9NXA8 310 aa10.57□□□□□ -0.72
VTI1A-208ENST00000494728 DNAJB12Q9NXW2 375 aaKnown RBP10.57□□□□□ -0.72
VTI1A-208ENST00000494728 JKAMPQ9P055 326 aa10.57□□□□□ -0.72
VTI1A-208ENST00000494728 CLCF1Q9UBD9 225 aa10.57□□□□□ -0.72
VTI1A-208ENST00000494728 ZNF629Q9UEG4 869 aaPredicted RBP10.57□□□□□ -0.72
VTI1A-208ENST00000494728 PSME2Q9UL46 239 aa10.57□□□□□ -0.72
VTI1A-208ENST00000494728 CCL27Q9Y4X3 112 aa10.57□□□□□ -0.72
VTI1A-208ENST00000494728 A6NNC1 897 aa10.56□□□□□ -0.72
VTI1A-208ENST00000494728 CLCA1A8K7I4 914 aa10.56□□□□□ -0.72
VTI1A-208ENST00000494728 EEF1E1-BLOC1S5C9J1V9 151 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms