RNA–Protein interactions for RNA: ENST00000494503.1

UBR4-216, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-216ENST00000494503 PPP4R1LQ9P1A2 415 aa8.74□□□□□ -1.01
UBR4-216ENST00000494503 XPR1Q9UBH6 696 aa8.74□□□□□ -1.01
UBR4-216ENST00000494503 FBXL2Q9UKC9 423 aa8.74□□□□□ -1.01
UBR4-216ENST00000494503 ADAM29Q9UKF5 820 aa8.74□□□□□ -1.01
UBR4-216ENST00000494503 SNX6Q9UNH7 406 aa8.74□□□□□ -1.01
UBR4-216ENST00000494503 WIF1Q9Y5W5 379 aa8.74□□□□□ -1.01
UBR4-216ENST00000494503 FN1P02751 2386 aaKnown RBP8.74□□□□□ -1.01
UBR4-216ENST00000494503 CSPG4Q6UVK1 2322 aa8.74□□□□□ -1.01
UBR4-216ENST00000494503 RTTNQ86VV8 2226 aa8.73□□□□□ -1.01
UBR4-216ENST00000494503 A0A1W2PNV4 684 aa8.73□□□□□ -1.01
UBR4-216ENST00000494503 GNG14A0A1W2PPG7 69 aa8.73□□□□□ -1.01
UBR4-216ENST00000494503 A0A1W2PPR1 153 aa8.73□□□□□ -1.01
UBR4-216ENST00000494503 ESYT3A0FGR9 886 aa8.73□□□□□ -1.01
UBR4-216ENST00000494503 FRG2CA6NGY1 282 aa8.73□□□□□ -1.01
UBR4-216ENST00000494503 H3BML4 177 aa8.73□□□□□ -1.01
UBR4-216ENST00000494503 LY6G6DO95868 133 aa8.73□□□□□ -1.01
UBR4-216ENST00000494503 CBX7O95931 251 aa8.73□□□□□ -1.01
UBR4-216ENST00000494503 TGM6O95932 706 aa8.73□□□□□ -1.01
UBR4-216ENST00000494503 OTCP00480 354 aa8.73□□□□□ -1.01
UBR4-216ENST00000494503 PDYNP01213 254 aa8.73□□□□□ -1.01
UBR4-216ENST00000494503 ATP1B1P05026 303 aa8.73□□□□□ -1.01
UBR4-216ENST00000494503 INHBAP08476 426 aa8.73□□□□□ -1.01
UBR4-216ENST00000494503 RBP1P09455 135 aa8.73□□□□□ -1.01
UBR4-216ENST00000494503 POU2F1P14859 743 aa8.73□□□□□ -1.01
UBR4-216ENST00000494503 CHMP24386 653 aa8.73□□□□□ -1.01
UBR4-216ENST00000494503 GRK2P25098 689 aa8.73□□□□□ -1.01
UBR4-216ENST00000494503 DPP4P27487 766 aa8.73□□□□□ -1.01
UBR4-216ENST00000494503 SRD5A2P31213 254 aa8.73□□□□□ -1.01
UBR4-216ENST00000494503 PTGDSP41222 190 aa8.73□□□□□ -1.01
UBR4-216ENST00000494503 LHX2P50458 406 aa8.73□□□□□ -1.01
UBR4-216ENST00000494503 CDH13P55290 713 aa8.73□□□□□ -1.01
UBR4-216ENST00000494503 CORO7P57737 925 aa8.73□□□□□ -1.01
UBR4-216ENST00000494503 HMGCS1Q01581 520 aa8.73□□□□□ -1.01
UBR4-216ENST00000494503 SLC7A5Q01650 507 aa8.73□□□□□ -1.01
UBR4-216ENST00000494503 MAP4K2Q12851 820 aa8.73□□□□□ -1.01
UBR4-216ENST00000494503 ZNF155Q12901 538 aaPredicted RBP8.73□□□□□ -1.01
UBR4-216ENST00000494503 TRAF3Q13114 568 aa8.73□□□□□ -1.01
UBR4-216ENST00000494503 TRADDQ15628 312 aa8.73□□□□□ -1.01
UBR4-216ENST00000494503 EXOC3L2Q2M3D2 409 aa8.73□□□□□ -1.01
UBR4-216ENST00000494503 ALKBH2Q6NS38 261 aa8.73□□□□□ -1.01
UBR4-216ENST00000494503 VWA1Q6PCB0 445 aa8.73□□□□□ -1.01
UBR4-216ENST00000494503 LARP4Q71RC2 724 aaKnown RBP eCLIP8.73□□□□□ -1.01
UBR4-216ENST00000494503 ZNF550Q7Z398 422 aa8.73□□□□□ -1.01
UBR4-216ENST00000494503 YTHDF3Q7Z739 585 aaKnown RBP8.73□□□□□ -1.01
UBR4-216ENST00000494503 CCDC116Q8IYX3 515 aa8.73□□□□□ -1.01
UBR4-216ENST00000494503 PLD6Q8N2A8 252 aaKnown RBP8.73□□□□□ -1.01
UBR4-216ENST00000494503 METTL4Q8N3J2 472 aa8.73□□□□□ -1.01
UBR4-216ENST00000494503 MEIOBQ8N635 442 aa8.73□□□□□ -1.01
UBR4-216ENST00000494503 C1orf52Q8N6N3 182 aaKnown RBP8.73□□□□□ -1.01
UBR4-216ENST00000494503 OR9A2Q8NGT5 310 aa8.73□□□□□ -1.01
UBR4-216ENST00000494503 PGM2Q96G03 612 aa8.73□□□□□ -1.01
UBR4-216ENST00000494503 SLC39A3Q9BRY0 314 aa8.73□□□□□ -1.01
UBR4-216ENST00000494503 PINK1Q9BXM7 581 aa8.73□□□□□ -1.01
UBR4-216ENST00000494503 KLHL4Q9C0H6 718 aa8.73□□□□□ -1.01
UBR4-216ENST00000494503 OPN3Q9H1Y3 402 aaPredicted RBP8.73□□□□□ -1.01
UBR4-216ENST00000494503 GRPEL1Q9HAV7 217 aa8.73□□□□□ -1.01
UBR4-216ENST00000494503 NMRK1Q9NWW6 199 aa8.73□□□□□ -1.01
UBR4-216ENST00000494503 PSD3Q9NYI0 1048 aa8.73□□□□□ -1.01
UBR4-216ENST00000494503 CLCF1Q9UBD9 225 aa8.73□□□□□ -1.01
UBR4-216ENST00000494503 PCTPQ9UKL6 214 aa8.73□□□□□ -1.01
UBR4-216ENST00000494503 TESMINQ9Y4I5 508 aa8.73□□□□□ -1.01
UBR4-216ENST00000494503 CCDC189A1A4V9 331 aa8.72□□□□□ -1.01
UBR4-216ENST00000494503 TRIM64A6NGJ6 449 aa8.72□□□□□ -1.01
UBR4-216ENST00000494503 TRIM64BA6NI03 449 aa8.72□□□□□ -1.01
UBR4-216ENST00000494503 OR6C70A6NIJ9 312 aa8.72□□□□□ -1.01
UBR4-216ENST00000494503 A8MXE2 369 aa8.72□□□□□ -1.01
UBR4-216ENST00000494503 MSTNO14793 375 aa8.72□□□□□ -1.01
UBR4-216ENST00000494503 ABCB7O75027 752 aa8.72□□□□□ -1.01
UBR4-216ENST00000494503 ALDOAP04075 364 aaKnown RBP8.72□□□□□ -1.01
UBR4-216ENST00000494503 HK1P19367 917 aa8.72□□□□□ -1.01
UBR4-216ENST00000494503 S1PR1P21453 382 aa8.72□□□□□ -1.01
UBR4-216ENST00000494503 FPR1P21462 350 aa8.72□□□□□ -1.01
UBR4-216ENST00000494503 DRD5P21918 477 aa8.72□□□□□ -1.01
UBR4-216ENST00000494503 CASQ1P31415 396 aa8.72□□□□□ -1.01
UBR4-216ENST00000494503 PPICP45877 212 aa8.72□□□□□ -1.01
UBR4-216ENST00000494503 GFRA1P56159 465 aa8.72□□□□□ -1.01
UBR4-216ENST00000494503 EEF1A1P68104 462 aaKnown RBP8.72□□□□□ -1.01
UBR4-216ENST00000494503 DUSP2Q05923 314 aa8.72□□□□□ -1.01
UBR4-216ENST00000494503 EFR3AQ14156 821 aa8.72□□□□□ -1.01
UBR4-216ENST00000494503 C10orf62Q5T681 223 aaPredicted RBP8.72□□□□□ -1.01
UBR4-216ENST00000494503 EEF1A1P5Q5VTE0 462 aa8.72□□□□□ -1.01
UBR4-216ENST00000494503 FAM219BQ5XKK7 198 aa8.72□□□□□ -1.01
UBR4-216ENST00000494503 ANKRD34AQ69YU3 496 aa8.72□□□□□ -1.01
UBR4-216ENST00000494503 OR2A2Q6IF42 318 aa8.72□□□□□ -1.01
UBR4-216ENST00000494503 KRTAP1-3Q8IUG1 177 aa8.72□□□□□ -1.01
UBR4-216ENST00000494503 SLC44A2Q8IWA5 706 aaPredicted RBP8.72□□□□□ -1.01
UBR4-216ENST00000494503 CIARTQ8N365 385 aaPredicted RBP8.72□□□□□ -1.01
UBR4-216ENST00000494503 CDYL2Q8N8U2 506 aa8.72□□□□□ -1.01
UBR4-216ENST00000494503 OR5M1Q8NGP8 315 aa8.72□□□□□ -1.01
UBR4-216ENST00000494503 TRPC4APQ8TEL6 797 aa8.72□□□□□ -1.01
UBR4-216ENST00000494503 TM4SF18Q96CE8 201 aa8.72□□□□□ -1.01
UBR4-216ENST00000494503 MTBPQ96DY7 904 aa8.72□□□□□ -1.01
UBR4-216ENST00000494503 CNRIP1Q96F85 164 aaPredicted RBP8.72□□□□□ -1.01
UBR4-216ENST00000494503 ZNF845Q96IR2 970 aaPredicted RBP8.72□□□□□ -1.01
UBR4-216ENST00000494503 WFIKKN1Q96NZ8 548 aa8.72□□□□□ -1.01
UBR4-216ENST00000494503 BDH2Q9BUT1 245 aa8.72□□□□□ -1.01
UBR4-216ENST00000494503 PRRG4Q9BZD6 226 aa8.72□□□□□ -1.01
UBR4-216ENST00000494503 ZBTB26Q9HCK0 441 aa8.72□□□□□ -1.01
UBR4-216ENST00000494503 FETUBQ9UGM5 382 aa8.72□□□□□ -1.01
UBR4-216ENST00000494503 TMCO1Q9UM00 188 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms