RNA–Protein interactions for RNA: ENST00000494464.5

ERCC3-209, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC3, Length 1,367 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-209ENST00000494464 HMGCS1Q01581 520 aa12.14□□□□□ -0.47
ERCC3-209ENST00000494464 MGAT2Q10469 447 aa12.14□□□□□ -0.47
ERCC3-209ENST00000494464 MAP4K2Q12851 820 aa12.14□□□□□ -0.47
ERCC3-209ENST00000494464 RPS6KA2Q15349 733 aa12.14□□□□□ -0.47
ERCC3-209ENST00000494464 GSTA3Q16772 222 aa12.14□□□□□ -0.47
ERCC3-209ENST00000494464 XKRXQ6PP77 449 aa12.14□□□□□ -0.47
ERCC3-209ENST00000494464 C16orf89Q6UX73 402 aa12.14□□□□□ -0.47
ERCC3-209ENST00000494464 SPATA19Q7Z5L4 167 aa12.14□□□□□ -0.47
ERCC3-209ENST00000494464 MRGPRGQ86SM5 289 aa12.14□□□□□ -0.47
ERCC3-209ENST00000494464 DOLPP1Q86YN1 238 aa12.14□□□□□ -0.47
ERCC3-209ENST00000494464 DDIASQ8IXT1 998 aa12.14□□□□□ -0.47
ERCC3-209ENST00000494464 ULK2Q8IYT8 1036 aa12.14□□□□□ -0.47
ERCC3-209ENST00000494464 SAMD14Q8IZD0 417 aaPredicted RBP12.14□□□□□ -0.47
ERCC3-209ENST00000494464 SLC34A3Q8N130 599 aa12.14□□□□□ -0.47
ERCC3-209ENST00000494464 LRRC25Q8N386 305 aaPredicted RBP12.14□□□□□ -0.47
ERCC3-209ENST00000494464 FAM109AQ8N4B1 249 aa12.14□□□□□ -0.47
ERCC3-209ENST00000494464 ADIPOR1Q96A54 375 aa12.14□□□□□ -0.47
ERCC3-209ENST00000494464 CTHRC1Q96CG8 243 aa12.14□□□□□ -0.47
ERCC3-209ENST00000494464 CNRIP1Q96F85 164 aaPredicted RBP12.14□□□□□ -0.47
ERCC3-209ENST00000494464 APIPQ96GX9 242 aa12.14□□□□□ -0.47
ERCC3-209ENST00000494464 ZNF681Q96N22 645 aa12.14□□□□□ -0.47
ERCC3-209ENST00000494464 PHF12Q96QT6 1004 aa12.14□□□□□ -0.47
ERCC3-209ENST00000494464 DMRTA2Q96SC8 542 aa12.14□□□□□ -0.47
ERCC3-209ENST00000494464 VKORC1Q9BQB6 163 aa12.14□□□□□ -0.47
ERCC3-209ENST00000494464 TMEM45AQ9NWC5 275 aa12.14□□□□□ -0.47
ERCC3-209ENST00000494464 TUBA8Q9NY65 449 aaPredicted RBP12.14□□□□□ -0.47
ERCC3-209ENST00000494464 EHD3Q9NZN3 535 aa12.14□□□□□ -0.47
ERCC3-209ENST00000494464 ZNF639Q9UID6 485 aa12.14□□□□□ -0.47
ERCC3-209ENST00000494464 PRPF19Q9UMS4 504 aaKnown RBP12.14□□□□□ -0.47
ERCC3-209ENST00000494464 ENTPD4Q9Y227 616 aa12.14□□□□□ -0.47
ERCC3-209ENST00000494464 CFL2Q9Y281 166 aa12.14□□□□□ -0.47
ERCC3-209ENST00000494464 DLGAP4Q9Y2H0 992 aa12.14□□□□□ -0.47
ERCC3-209ENST00000494464 ZNF780BQ9Y6R6 833 aa12.14□□□□□ -0.47
ERCC3-209ENST00000494464 NAV2Q8IVL1 2488 aa12.13□□□□□ -0.47
ERCC3-209ENST00000494464 GNG14A0A1W2PPG7 69 aa12.13□□□□□ -0.47
ERCC3-209ENST00000494464 FAM166BA8MTA8 275 aa12.13□□□□□ -0.47
ERCC3-209ENST00000494464 ERAL1O75616 437 aaKnown RBP12.13□□□□□ -0.47
ERCC3-209ENST00000494464 RSL1D1O76021 490 aaKnown RBP12.13□□□□□ -0.47
ERCC3-209ENST00000494464 IL3P08700 152 aa12.13□□□□□ -0.47
ERCC3-209ENST00000494464 ALDOCP09972 364 aaKnown RBP12.13□□□□□ -0.47
ERCC3-209ENST00000494464 GPX3P22352 226 aa12.13□□□□□ -0.47
ERCC3-209ENST00000494464 FEN1P39748 380 aaKnown RBP12.13□□□□□ -0.47
ERCC3-209ENST00000494464 ALDH9A1P49189 494 aa12.13□□□□□ -0.47
ERCC3-209ENST00000494464 NR0B1P51843 470 aaKnown RBP12.13□□□□□ -0.47
ERCC3-209ENST00000494464 SMSP52788 366 aa12.13□□□□□ -0.47
ERCC3-209ENST00000494464 NRG3P56975 720 aa12.13□□□□□ -0.47
ERCC3-209ENST00000494464 DUSP2Q05923 314 aa12.13□□□□□ -0.47
ERCC3-209ENST00000494464 HEPACAMQ14CZ8 416 aa12.13□□□□□ -0.47
ERCC3-209ENST00000494464 TBCELQ5QJ74 424 aa12.13□□□□□ -0.47
ERCC3-209ENST00000494464 HLA-DQA1Q5Y7H0 255 aa12.13□□□□□ -0.47
ERCC3-209ENST00000494464 ZNF787Q6DD87 383 aa12.13□□□□□ -0.47
ERCC3-209ENST00000494464 TRIM46Q7Z4K8 759 aa12.13□□□□□ -0.47
ERCC3-209ENST00000494464 NET1Q7Z628 596 aaPredicted RBP12.13□□□□□ -0.47
ERCC3-209ENST00000494464 CD163Q86VB7 1156 aa12.13□□□□□ -0.47
ERCC3-209ENST00000494464 TMEM251Q8N6I4 163 aa12.13□□□□□ -0.47
ERCC3-209ENST00000494464 OR10G3Q8NGC4 313 aa12.13□□□□□ -0.47
ERCC3-209ENST00000494464 ZNF675Q8TD23 568 aa12.13□□□□□ -0.47
ERCC3-209ENST00000494464 MARK4Q96L34 752 aa12.13□□□□□ -0.47
ERCC3-209ENST00000494464 SECISBP2Q96T21 854 aaKnown RBP12.13□□□□□ -0.47
ERCC3-209ENST00000494464 BRINP2Q9C0B6 783 aa12.13□□□□□ -0.47
ERCC3-209ENST00000494464 DENND2DQ9H6A0 471 aaPredicted RBP12.13□□□□□ -0.47
ERCC3-209ENST00000494464 ZNF703Q9H7S9 590 aaPredicted RBP12.13□□□□□ -0.47
ERCC3-209ENST00000494464 BAIAP2L1Q9UHR4 511 aa12.13□□□□□ -0.47
ERCC3-209ENST00000494464 UTS2RQ9UKP6 389 aa12.13□□□□□ -0.47
ERCC3-209ENST00000494464 CNOT11Q9UKZ1 510 aaKnown RBP12.13□□□□□ -0.47
ERCC3-209ENST00000494464 BOKQ9UMX3 212 aaPredicted RBP12.13□□□□□ -0.47
ERCC3-209ENST00000494464 LOC100653049A0A140TA62 436 aa12.12□□□□□ -0.47
ERCC3-209ENST00000494464 A0A1B0GVC2 190 aa12.12□□□□□ -0.47
ERCC3-209ENST00000494464 ANKRD33BA6NCL7 494 aa12.12□□□□□ -0.47
ERCC3-209ENST00000494464 OR14I1A6ND48 311 aa12.12□□□□□ -0.47
ERCC3-209ENST00000494464 BBIP1A8MTZ0 92 aa12.12□□□□□ -0.47
ERCC3-209ENST00000494464 PRSS44E7EML9 344 aa12.12□□□□□ -0.47
ERCC3-209ENST00000494464 NPIPB8E9PQR5 432 aa12.12□□□□□ -0.47
ERCC3-209ENST00000494464 ADAM10O14672 748 aa12.12□□□□□ -0.47
ERCC3-209ENST00000494464 TP53I11O14683 189 aa12.12□□□□□ -0.47
ERCC3-209ENST00000494464 ZNHIT1O43257 154 aa12.12□□□□□ -0.47
ERCC3-209ENST00000494464 CIB2O75838 187 aa12.12□□□□□ -0.47
ERCC3-209ENST00000494464 KRT34O76011 436 aa12.12□□□□□ -0.47
ERCC3-209ENST00000494464 TPOP07202 933 aa12.12□□□□□ -0.47
ERCC3-209ENST00000494464 IDO1P14902 403 aa12.12□□□□□ -0.47
ERCC3-209ENST00000494464 SOX18P35713 384 aa12.12□□□□□ -0.47
ERCC3-209ENST00000494464 PIGAP37287 484 aa12.12□□□□□ -0.47
ERCC3-209ENST00000494464 MAGEA5P43359 124 aa12.12□□□□□ -0.47
ERCC3-209ENST00000494464 SLC25A3Q00325 362 aa12.12□□□□□ -0.47
ERCC3-209ENST00000494464 ZNF763Q0D2J5 394 aa12.12□□□□□ -0.47
ERCC3-209ENST00000494464 STX5Q13190 355 aa12.12□□□□□ -0.47
ERCC3-209ENST00000494464 CEBPEQ15744 281 aa12.12□□□□□ -0.47
ERCC3-209ENST00000494464 IMPG1Q17R60 797 aa12.12□□□□□ -0.47
ERCC3-209ENST00000494464 SMU1Q2TAY7 513 aa12.12□□□□□ -0.47
ERCC3-209ENST00000494464 TRMT5Q32P41 509 aaKnown RBP12.12□□□□□ -0.47
ERCC3-209ENST00000494464 PRAMEF20Q5VT98 475 aa12.12□□□□□ -0.47
ERCC3-209ENST00000494464 PGM2L1Q6PCE3 622 aa12.12□□□□□ -0.47
ERCC3-209ENST00000494464 FAM111BQ6SJ93 734 aa12.12□□□□□ -0.47
ERCC3-209ENST00000494464 C16orf78Q8WTQ4 265 aa12.12□□□□□ -0.47
ERCC3-209ENST00000494464 TUBGCP3Q96CW5 907 aa12.12□□□□□ -0.47
ERCC3-209ENST00000494464 METTL2AQ96IZ6 378 aaKnown RBP12.12□□□□□ -0.47
ERCC3-209ENST00000494464 DEFB127Q9H1M4 99 aa12.12□□□□□ -0.47
ERCC3-209ENST00000494464 TP63Q9H3D4 680 aaPredicted RBP12.12□□□□□ -0.47
ERCC3-209ENST00000494464 PROK2Q9HC23 129 aa12.12□□□□□ -0.47
ERCC3-209ENST00000494464 SDR39U1Q9NRG7 319 aaPredicted RBP12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms