RNA–Protein interactions for RNA: ENST00000494334.1

COL1A1-208, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 396 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-208ENST00000494334 VPS37AQ8NEZ2 397 aa12.45□□□□□ -0.42
COL1A1-208ENST00000494334 OR2M7Q8NG81 312 aa12.45□□□□□ -0.42
COL1A1-208ENST00000494334 SPPL2AQ8TCT8 520 aa12.45□□□□□ -0.42
COL1A1-208ENST00000494334 STON2Q8WXE9 905 aa12.45□□□□□ -0.42
COL1A1-208ENST00000494334 NR4A3Q92570 626 aa12.45□□□□□ -0.42
COL1A1-208ENST00000494334 HOXB13Q92826 284 aaPredicted RBP12.45□□□□□ -0.42
COL1A1-208ENST00000494334 HGDQ93099 445 aa12.45□□□□□ -0.42
COL1A1-208ENST00000494334 C16orf58Q96GQ5 468 aa12.45□□□□□ -0.42
COL1A1-208ENST00000494334 MS4A4EQ96PG1 132 aa12.45□□□□□ -0.42
COL1A1-208ENST00000494334 SECISBP2Q96T21 854 aaKnown RBP12.45□□□□□ -0.42
COL1A1-208ENST00000494334 ZBTB18Q99592 522 aa12.45□□□□□ -0.42
COL1A1-208ENST00000494334 SLX1AQ9BQ83 275 aa12.45□□□□□ -0.42
COL1A1-208ENST00000494334 SIKE1Q9BRV8 207 aa12.45□□□□□ -0.42
COL1A1-208ENST00000494334 PROK2Q9HC23 129 aa12.45□□□□□ -0.42
COL1A1-208ENST00000494334 FGFR1OP2Q9NVK5 253 aa12.45□□□□□ -0.42
COL1A1-208ENST00000494334 CNIH4Q9P003 139 aa12.45□□□□□ -0.42
COL1A1-208ENST00000494334 CNOT11Q9UKZ1 510 aaKnown RBP12.45□□□□□ -0.42
COL1A1-208ENST00000494334 PCDHGB4Q9UN71 923 aa12.45□□□□□ -0.42
COL1A1-208ENST00000494334 OR10H1Q9Y4A9 318 aa12.45□□□□□ -0.42
COL1A1-208ENST00000494334 A0A0G2JND7 137 aa12.44□□□□□ -0.42
COL1A1-208ENST00000494334 TTC36A6NLP5 189 aa12.44□□□□□ -0.42
COL1A1-208ENST00000494334 TSPAN2O60636 221 aa12.44□□□□□ -0.42
COL1A1-208ENST00000494334 UGT2B11O75310 529 aa12.44□□□□□ -0.42
COL1A1-208ENST00000494334 REM1O75628 298 aa12.44□□□□□ -0.42
COL1A1-208ENST00000494334 NKX2-2O95096 273 aa12.44□□□□□ -0.42
COL1A1-208ENST00000494334 CPSF4O95639 269 aaKnown RBP12.44□□□□□ -0.42
COL1A1-208ENST00000494334 HMGN2P05204 90 aaKnown RBP12.44□□□□□ -0.42
COL1A1-208ENST00000494334 IL6P05231 212 aa12.44□□□□□ -0.42
COL1A1-208ENST00000494334 VIMP08670 466 aaKnown RBP12.44□□□□□ -0.42
COL1A1-208ENST00000494334 ACP2P11117 423 aa12.44□□□□□ -0.42
COL1A1-208ENST00000494334 MST1P26927 711 aa12.44□□□□□ -0.42
COL1A1-208ENST00000494334 GABRA3P34903 492 aa12.44□□□□□ -0.42
COL1A1-208ENST00000494334 RFC3P40938 356 aa12.44□□□□□ -0.42
COL1A1-208ENST00000494334 TDGF1P3P51864 188 aa12.44□□□□□ -0.42
COL1A1-208ENST00000494334 PSPHP78330 225 aa12.44□□□□□ -0.42
COL1A1-208ENST00000494334 ALDH6A1Q02252 535 aaKnown RBP12.44□□□□□ -0.42
COL1A1-208ENST00000494334 SPDYE7PQ495Y7 208 aa12.44□□□□□ -0.42
COL1A1-208ENST00000494334 CYP27C1Q4G0S4 372 aa12.44□□□□□ -0.42
COL1A1-208ENST00000494334 EXOSC6Q5RKV6 272 aaKnown RBP12.44□□□□□ -0.42
COL1A1-208ENST00000494334 CGB2Q6NT52 195 aa12.44□□□□□ -0.42
COL1A1-208ENST00000494334 MFSD12Q6NUT3 480 aa12.44□□□□□ -0.42
COL1A1-208ENST00000494334 ZCCHC12Q6PEW1 402 aa12.44□□□□□ -0.42
COL1A1-208ENST00000494334 CLEC4FQ8N1N0 589 aa12.44□□□□□ -0.42
COL1A1-208ENST00000494334 MIER2Q8N344 545 aa12.44□□□□□ -0.42
COL1A1-208ENST00000494334 CDRT4Q8N9R6 151 aa12.44□□□□□ -0.42
COL1A1-208ENST00000494334 POGLUT1Q8NBL1 392 aa12.44□□□□□ -0.42
COL1A1-208ENST00000494334 SLC16A11Q8NCK7 471 aa12.44□□□□□ -0.42
COL1A1-208ENST00000494334 GALNT11Q8NCW6 608 aa12.44□□□□□ -0.42
COL1A1-208ENST00000494334 OR56A1Q8NGH5 318 aa12.44□□□□□ -0.42
COL1A1-208ENST00000494334 OR4A15Q8NGL6 344 aa12.44□□□□□ -0.42
COL1A1-208ENST00000494334 OR9I1Q8NGQ6 314 aa12.44□□□□□ -0.42
COL1A1-208ENST00000494334 OR5AK3PQ8NH89 298 aa12.44□□□□□ -0.42
COL1A1-208ENST00000494334 SFXN5Q8TD22 340 aa12.44□□□□□ -0.42
COL1A1-208ENST00000494334 SLC9A6Q92581 669 aa12.44□□□□□ -0.42
COL1A1-208ENST00000494334 DIO2Q92813 273 aa12.44□□□□□ -0.42
COL1A1-208ENST00000494334 MOAP1Q96BY2 351 aa12.44□□□□□ -0.42
COL1A1-208ENST00000494334 SLC35A4Q96G79 324 aa12.44□□□□□ -0.42
COL1A1-208ENST00000494334 OR52E6Q96RD3 313 aa12.44□□□□□ -0.42
COL1A1-208ENST00000494334 NODALQ96S42 347 aa12.44□□□□□ -0.42
COL1A1-208ENST00000494334 ADOQ96SZ5 270 aa12.44□□□□□ -0.42
COL1A1-208ENST00000494334 FAM173AQ9BQD7 235 aa12.44□□□□□ -0.42
COL1A1-208ENST00000494334 YIPF4Q9BSR8 244 aa12.44□□□□□ -0.42
COL1A1-208ENST00000494334 Q9N2J8 555 aa12.44□□□□□ -0.42
COL1A1-208ENST00000494334 GPATCH2Q9NW75 528 aa12.44□□□□□ -0.42
COL1A1-208ENST00000494334 FAM120CQ9NX05 1096 aaKnown RBP12.44□□□□□ -0.42
COL1A1-208ENST00000494334 BTNL2Q9UIR0 455 aa12.44□□□□□ -0.42
COL1A1-208ENST00000494334 CBLCQ9ULV8 474 aa12.44□□□□□ -0.42
COL1A1-208ENST00000494334 VPS4AQ9UN37 437 aa12.44□□□□□ -0.42
COL1A1-208ENST00000494334 GXYLT2A0PJZ3 443 aa12.43□□□□□ -0.42
COL1A1-208ENST00000494334 ANKRD33BA6NCL7 494 aa12.43□□□□□ -0.42
COL1A1-208ENST00000494334 OR6C70A6NIJ9 312 aa12.43□□□□□ -0.42
COL1A1-208ENST00000494334 CBX6O95503 412 aa12.43□□□□□ -0.42
COL1A1-208ENST00000494334 EDN3P14138 238 aa12.43□□□□□ -0.42
COL1A1-208ENST00000494334 SOAT1P35610 550 aa12.43□□□□□ -0.42
COL1A1-208ENST00000494334 KRT20P35900 424 aa12.43□□□□□ -0.42
COL1A1-208ENST00000494334 CASP3P42574 277 aa12.43□□□□□ -0.42
COL1A1-208ENST00000494334 PRIM2P49643 509 aa12.43□□□□□ -0.42
COL1A1-208ENST00000494334 POLR2JP52435 117 aaKnown RBP12.43□□□□□ -0.42
COL1A1-208ENST00000494334 PNLIPRP2P54317 469 aa12.43□□□□□ -0.42
COL1A1-208ENST00000494334 STX1BP61266 288 aa12.43□□□□□ -0.42
COL1A1-208ENST00000494334 RPP38P78345 283 aaKnown RBP12.43□□□□□ -0.42
COL1A1-208ENST00000494334 FOXO1Q12778 655 aa12.43□□□□□ -0.42
COL1A1-208ENST00000494334 TP53BP2Q13625 1128 aa12.43□□□□□ -0.42
COL1A1-208ENST00000494334 LASP1Q14847 261 aaKnown RBP12.43□□□□□ -0.42
COL1A1-208ENST00000494334 DUSP5Q16690 384 aa12.43□□□□□ -0.42
COL1A1-208ENST00000494334 VPS26BQ4G0F5 336 aa12.43□□□□□ -0.42
COL1A1-208ENST00000494334 BICRALQ6AI39 1079 aa12.43□□□□□ -0.42
COL1A1-208ENST00000494334 ATCAYQ86WG3 371 aa12.43□□□□□ -0.42
COL1A1-208ENST00000494334 SIAH3Q8IW03 269 aa12.43□□□□□ -0.42
COL1A1-208ENST00000494334 GOT1L1Q8NHS2 421 aaPredicted RBP12.43□□□□□ -0.42
COL1A1-208ENST00000494334 FBXO30Q8TB52 745 aa12.43□□□□□ -0.42
COL1A1-208ENST00000494334 GPR151Q8TDV0 419 aa12.43□□□□□ -0.42
COL1A1-208ENST00000494334 PIK3R3Q92569 461 aa12.43□□□□□ -0.42
COL1A1-208ENST00000494334 EFHD2Q96C19 240 aaPredicted RBP12.43□□□□□ -0.42
COL1A1-208ENST00000494334 RILPQ96NA2 401 aa12.43□□□□□ -0.42
COL1A1-208ENST00000494334 CCDC115Q96NT0 180 aa12.43□□□□□ -0.42
COL1A1-208ENST00000494334 COL21A1Q96P44 957 aa12.43□□□□□ -0.42
COL1A1-208ENST00000494334 ZNF317Q96PQ6 595 aaPredicted RBP12.43□□□□□ -0.42
COL1A1-208ENST00000494334 ANGPTL4Q9BY76 406 aa12.43□□□□□ -0.42
COL1A1-208ENST00000494334 TUBA8Q9NY65 449 aaPredicted RBP12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms