RNA–Protein interactions for RNA: ENST00000494067.5

CTDSP1-212, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 362 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-212ENST00000494067 FAM9CQ8IZT9 166 aa12.21□□□□□ -0.45
CTDSP1-212ENST00000494067 CCNYL1Q8N7R7 359 aa12.21□□□□□ -0.45
CTDSP1-212ENST00000494067 RELL2Q8NC24 303 aaPredicted RBP12.21□□□□□ -0.45
CTDSP1-212ENST00000494067 FAM83FQ8NEG4 500 aaPredicted RBP12.21□□□□□ -0.45
CTDSP1-212ENST00000494067 OR9A2Q8NGT5 310 aa12.21□□□□□ -0.45
CTDSP1-212ENST00000494067 GOT1L1Q8NHS2 421 aaPredicted RBP12.21□□□□□ -0.45
CTDSP1-212ENST00000494067 C16orf78Q8WTQ4 265 aa12.21□□□□□ -0.45
CTDSP1-212ENST00000494067 KAT2AQ92830 837 aa12.21□□□□□ -0.45
CTDSP1-212ENST00000494067 RNASE6Q93091 150 aaKnown RBP12.21□□□□□ -0.45
CTDSP1-212ENST00000494067 BBS4Q96RK4 519 aa12.21□□□□□ -0.45
CTDSP1-212ENST00000494067 STMN4Q9H169 189 aaPredicted RBP12.21□□□□□ -0.45
CTDSP1-212ENST00000494067 CALHM2Q9HA72 323 aa12.21□□□□□ -0.45
CTDSP1-212ENST00000494067 MIEF1Q9NQG6 463 aa12.21□□□□□ -0.45
CTDSP1-212ENST00000494067 MAPRE3Q9UPY8 281 aa12.21□□□□□ -0.45
CTDSP1-212ENST00000494067 PTGDR2Q9Y5Y4 395 aa12.21□□□□□ -0.45
CTDSP1-212ENST00000494067 HRNRQ86YZ3 2850 aaPredicted RBP12.2□□□□□ -0.46
CTDSP1-212ENST00000494067 OR6C70A6NIJ9 312 aa12.2□□□□□ -0.46
CTDSP1-212ENST00000494067 H0Y3Z8 333 aa12.2□□□□□ -0.46
CTDSP1-212ENST00000494067 COQ9O75208 318 aa12.2□□□□□ -0.46
CTDSP1-212ENST00000494067 GLRA3O75311 464 aa12.2□□□□□ -0.46
CTDSP1-212ENST00000494067 ERN1O75460 977 aaKnown RBP12.2□□□□□ -0.46
CTDSP1-212ENST00000494067 ANXA4P09525 319 aaPredicted RBP12.2□□□□□ -0.46
CTDSP1-212ENST00000494067 CT45A8P0DMV1 189 aa12.2□□□□□ -0.46
CTDSP1-212ENST00000494067 CT45A9P0DMV2 189 aa12.2□□□□□ -0.46
CTDSP1-212ENST00000494067 MYL2P10916 166 aa12.2□□□□□ -0.46
CTDSP1-212ENST00000494067 CTSSP25774 331 aa12.2□□□□□ -0.46
CTDSP1-212ENST00000494067 TIA1P31483 386 aaKnown RBP eCLIP12.2□□□□□ -0.46
CTDSP1-212ENST00000494067 RIPPLY3P57055 190 aa12.2□□□□□ -0.46
CTDSP1-212ENST00000494067 CORO7P57737 925 aa12.2□□□□□ -0.46
CTDSP1-212ENST00000494067 CT45A2Q5DJT8 189 aa12.2□□□□□ -0.46
CTDSP1-212ENST00000494067 PLXDC2Q6UX71 529 aa12.2□□□□□ -0.46
CTDSP1-212ENST00000494067 ZYG11AQ6WRX3 759 aa12.2□□□□□ -0.46
CTDSP1-212ENST00000494067 SPNS3Q6ZMD2 512 aa12.2□□□□□ -0.46
CTDSP1-212ENST00000494067 CHMP1BQ7LBR1 199 aa12.2□□□□□ -0.46
CTDSP1-212ENST00000494067 IFNEQ86WN2 208 aa12.2□□□□□ -0.46
CTDSP1-212ENST00000494067 ZZZ3Q8IYH5 903 aa12.2□□□□□ -0.46
CTDSP1-212ENST00000494067 ZPLD1Q8TCW7 415 aa12.2□□□□□ -0.46
CTDSP1-212ENST00000494067 EPS8L3Q8TE67 593 aaKnown RBP12.2□□□□□ -0.46
CTDSP1-212ENST00000494067 FAM222BQ8WU58 562 aa12.2□□□□□ -0.46
CTDSP1-212ENST00000494067 TMBIM1Q969X1 311 aa12.2□□□□□ -0.46
CTDSP1-212ENST00000494067 WDYHV1Q96HA8 205 aa12.2□□□□□ -0.46
CTDSP1-212ENST00000494067 MID1IP1Q9NPA3 183 aa12.2□□□□□ -0.46
CTDSP1-212ENST00000494067 SLC35C2Q9NQQ7 365 aa12.2□□□□□ -0.46
CTDSP1-212ENST00000494067 MRTO4Q9UKD2 239 aaKnown RBP12.2□□□□□ -0.46
CTDSP1-212ENST00000494067 GPR55Q9Y2T6 319 aaPredicted RBP12.2□□□□□ -0.46
CTDSP1-212ENST00000494067 OR10H1Q9Y4A9 318 aa12.2□□□□□ -0.46
CTDSP1-212ENST00000494067 CCL27Q9Y4X3 112 aa12.2□□□□□ -0.46
CTDSP1-212ENST00000494067 MED12Q93074 2177 aa12.2□□□□□ -0.46
CTDSP1-212ENST00000494067 INTS1Q8N201 2190 aaKnown RBP12.19□□□□□ -0.46
CTDSP1-212ENST00000494067 SERTM1A2A2V5 107 aa12.19□□□□□ -0.46
CTDSP1-212ENST00000494067 MBD3L4A6NDZ8 208 aaPredicted RBP12.19□□□□□ -0.46
CTDSP1-212ENST00000494067 MBD3L3A6NE82 208 aaPredicted RBP12.19□□□□□ -0.46
CTDSP1-212ENST00000494067 TUBAL3A6NHL2 446 aa12.19□□□□□ -0.46
CTDSP1-212ENST00000494067 MBD3L5A6NJ08 208 aaPredicted RBP12.19□□□□□ -0.46
CTDSP1-212ENST00000494067 PLIN3O60664 434 aa12.19□□□□□ -0.46
CTDSP1-212ENST00000494067 SLITRK5O94991 958 aa12.19□□□□□ -0.46
CTDSP1-212ENST00000494067 CPN1P15169 458 aa12.19□□□□□ -0.46
CTDSP1-212ENST00000494067 CCT5P48643 541 aa12.19□□□□□ -0.46
CTDSP1-212ENST00000494067 DGKQP52824 942 aa12.19□□□□□ -0.46
CTDSP1-212ENST00000494067 ART1P52961 327 aa12.19□□□□□ -0.46
CTDSP1-212ENST00000494067 NAGLUP54802 743 aa12.19□□□□□ -0.46
CTDSP1-212ENST00000494067 EEF1A1P68104 462 aaKnown RBP12.19□□□□□ -0.46
CTDSP1-212ENST00000494067 ZNF763Q0D2J5 394 aa12.19□□□□□ -0.46
CTDSP1-212ENST00000494067 C2orf80Q0P641 193 aa12.19□□□□□ -0.46
CTDSP1-212ENST00000494067 CEBPEQ15744 281 aa12.19□□□□□ -0.46
CTDSP1-212ENST00000494067 FBXL19-AS1Q494R0 122 aa12.19□□□□□ -0.46
CTDSP1-212ENST00000494067 CCDC153Q494R4 210 aa12.19□□□□□ -0.46
CTDSP1-212ENST00000494067 FLYWCH1Q4VC44 716 aa12.19□□□□□ -0.46
CTDSP1-212ENST00000494067 EEF1A1P5Q5VTE0 462 aa12.19□□□□□ -0.46
CTDSP1-212ENST00000494067 GALNT18Q6P9A2 607 aa12.19□□□□□ -0.46
CTDSP1-212ENST00000494067 FRMD7Q6ZUT3 714 aa12.19□□□□□ -0.46
CTDSP1-212ENST00000494067 LARP4Q71RC2 724 aaKnown RBP eCLIP12.19□□□□□ -0.46
CTDSP1-212ENST00000494067 PLCZ1Q86YW0 608 aa12.19□□□□□ -0.46
CTDSP1-212ENST00000494067 WDSUB1Q8N9V3 476 aa12.19□□□□□ -0.46
CTDSP1-212ENST00000494067 CCDC63Q8NA47 563 aa12.19□□□□□ -0.46
CTDSP1-212ENST00000494067 OR7G2Q8NG99 324 aa12.19□□□□□ -0.46
CTDSP1-212ENST00000494067 OR4N2Q8NGD1 307 aa12.19□□□□□ -0.46
CTDSP1-212ENST00000494067 MBD3L2Q8NHZ7 208 aaPredicted RBP12.19□□□□□ -0.46
CTDSP1-212ENST00000494067 CDC26Q8NHZ8 85 aa12.19□□□□□ -0.46
CTDSP1-212ENST00000494067 PUM2Q8TB72 1066 aaKnown RBP eCLIP12.19□□□□□ -0.46
CTDSP1-212ENST00000494067 RDH11Q8TC12 318 aa12.19□□□□□ -0.46
CTDSP1-212ENST00000494067 NRGNQ92686 78 aa12.19□□□□□ -0.46
CTDSP1-212ENST00000494067 NINJ1Q92982 152 aa12.19□□□□□ -0.46
CTDSP1-212ENST00000494067 RMND5BQ96G75 393 aaPredicted RBP12.19□□□□□ -0.46
CTDSP1-212ENST00000494067 SLC35A4Q96G79 324 aa12.19□□□□□ -0.46
CTDSP1-212ENST00000494067 VSTM2LQ96N03 204 aa12.19□□□□□ -0.46
CTDSP1-212ENST00000494067 BTBD9Q96Q07 612 aa12.19□□□□□ -0.46
CTDSP1-212ENST00000494067 ADOQ96SZ5 270 aa12.19□□□□□ -0.46
CTDSP1-212ENST00000494067 TM9SF2Q99805 663 aa12.19□□□□□ -0.46
CTDSP1-212ENST00000494067 CLEC4MQ9H2X3 399 aaPredicted RBP12.19□□□□□ -0.46
CTDSP1-212ENST00000494067 ACBD3Q9H3P7 528 aa12.19□□□□□ -0.46
CTDSP1-212ENST00000494067 SERHLQ9NQF3 203 aa12.19□□□□□ -0.46
CTDSP1-212ENST00000494067 RRAGDQ9NQL2 400 aaPredicted RBP12.19□□□□□ -0.46
CTDSP1-212ENST00000494067 SDHAF3Q9NRP4 125 aa12.19□□□□□ -0.46
CTDSP1-212ENST00000494067 TAS2R10Q9NYW0 307 aa12.19□□□□□ -0.46
CTDSP1-212ENST00000494067 DKKL1Q9UK85 242 aa12.19□□□□□ -0.46
CTDSP1-212ENST00000494067 GRID1Q9ULK0 1009 aa12.19□□□□□ -0.46
CTDSP1-212ENST00000494067 WBP11Q9Y2W2 641 aaKnown RBP12.19□□□□□ -0.46
CTDSP1-212ENST00000494067 ANKRD17O75179 2603 aaKnown RBP12.18□□□□□ -0.46
CTDSP1-212ENST00000494067 SMIM23A6NLE4 172 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms