RNA–Protein interactions for RNA: ENST00000493786.2

VEGFA-214, Transcript of vascular endothelial growth factor A, humanhuman

TSL 2

Gene VEGFA, Length 551 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-214ENST00000493786 EFCAB1Q9HAE3 211 aa7.03□□□□□ -1.28
VEGFA-214ENST00000493786 TPT1P8Q9HAU6 139 aa7.03□□□□□ -1.28
VEGFA-214ENST00000493786 CACYBPQ9HB71 228 aaKnown RBP7.03□□□□□ -1.28
VEGFA-214ENST00000493786 SLC52A3Q9NQ40 469 aa7.03□□□□□ -1.28
VEGFA-214ENST00000493786 DUSP22Q9NRW4 184 aa7.03□□□□□ -1.28
VEGFA-214ENST00000493786 THUMPD1Q9NXG2 353 aaKnown RBP7.03□□□□□ -1.28
VEGFA-214ENST00000493786 TAGLN3Q9UI15 199 aa7.03□□□□□ -1.28
VEGFA-214ENST00000493786 CBLCQ9ULV8 474 aa7.03□□□□□ -1.28
VEGFA-214ENST00000493786 DTX4Q9Y2E6 619 aa7.03□□□□□ -1.28
VEGFA-214ENST00000493786 GPR55Q9Y2T6 319 aaPredicted RBP7.03□□□□□ -1.28
VEGFA-214ENST00000493786 PCDHB14Q9Y5E9 798 aa7.03□□□□□ -1.28
VEGFA-214ENST00000493786 NPFFR2Q9Y5X5 522 aa7.03□□□□□ -1.28
VEGFA-214ENST00000493786 CELSR3Q9NYQ7 3312 aa7.03□□□□□ -1.28
VEGFA-214ENST00000493786 ZZEF1O43149 2961 aa7.03□□□□□ -1.28
VEGFA-214ENST00000493786 CROCCQ5TZA2 2017 aa7.03□□□□□ -1.28
VEGFA-214ENST00000493786 PTPRQQ9UMZ3 2332 aa7.02□□□□□ -1.28
VEGFA-214ENST00000493786 DSPP15924 2871 aaKnown RBP7.02□□□□□ -1.28
VEGFA-214ENST00000493786 GIMAP1-GIMAP5A0A087WTJ2 511 aa7.02□□□□□ -1.29
VEGFA-214ENST00000493786 C15orf38-AP3S2A0A0A6YYH1 394 aa7.02□□□□□ -1.29
VEGFA-214ENST00000493786 OR5H15A6NDH6 313 aa7.02□□□□□ -1.29
VEGFA-214ENST00000493786 TMEM200CA6NKL6 621 aa7.02□□□□□ -1.29
VEGFA-214ENST00000493786 CLIC1O00299 241 aa7.02□□□□□ -1.29
VEGFA-214ENST00000493786 FBP2O00757 339 aa7.02□□□□□ -1.29
VEGFA-214ENST00000493786 TO15178 435 aa7.02□□□□□ -1.29
VEGFA-214ENST00000493786 ASNA1O43681 348 aa7.02□□□□□ -1.29
VEGFA-214ENST00000493786 NKX2-2O95096 273 aa7.02□□□□□ -1.29
VEGFA-214ENST00000493786 WDPCPO95876 746 aa7.02□□□□□ -1.29
VEGFA-214ENST00000493786 FBXO45P0C2W1 286 aa7.02□□□□□ -1.29
VEGFA-214ENST00000493786 ACP2P11117 423 aa7.02□□□□□ -1.29
VEGFA-214ENST00000493786 ESRRAP11474 423 aaPredicted RBP7.02□□□□□ -1.29
VEGFA-214ENST00000493786 CD46P15529 392 aa7.02□□□□□ -1.29
VEGFA-214ENST00000493786 NAGAP17050 411 aa7.02□□□□□ -1.29
VEGFA-214ENST00000493786 ABCD3P28288 659 aa7.02□□□□□ -1.29
VEGFA-214ENST00000493786 SOX18P35713 384 aa7.02□□□□□ -1.29
VEGFA-214ENST00000493786 SOX3P41225 446 aa7.02□□□□□ -1.29
VEGFA-214ENST00000493786 RFX3P48380 749 aa7.02□□□□□ -1.29
VEGFA-214ENST00000493786 NUDT2P50583 147 aa7.02□□□□□ -1.29
VEGFA-214ENST00000493786 HLCSP50747 726 aa7.02□□□□□ -1.29
VEGFA-214ENST00000493786 CASP9P55211 416 aa7.02□□□□□ -1.29
VEGFA-214ENST00000493786 CORO7P57737 925 aa7.02□□□□□ -1.29
VEGFA-214ENST00000493786 RPS26P62854 115 aaKnown RBP7.02□□□□□ -1.29
VEGFA-214ENST00000493786 PSG6Q00889 435 aa7.02□□□□□ -1.29
VEGFA-214ENST00000493786 FADDQ13158 208 aa7.02□□□□□ -1.29
VEGFA-214ENST00000493786 TUBA3CQ13748 450 aa7.02□□□□□ -1.29
VEGFA-214ENST00000493786 EFR3AQ14156 821 aa7.02□□□□□ -1.29
VEGFA-214ENST00000493786 GNA13Q14344 377 aa7.02□□□□□ -1.29
VEGFA-214ENST00000493786 KRT72Q14CN4 511 aa7.02□□□□□ -1.29
VEGFA-214ENST00000493786 OR1C1Q15619 314 aa7.02□□□□□ -1.29
VEGFA-214ENST00000493786 LINC00303Q3SY05 128 aa7.02□□□□□ -1.29
VEGFA-214ENST00000493786 GTDC1Q4AE62 458 aa7.02□□□□□ -1.29
VEGFA-214ENST00000493786 DDX59Q5T1V6 619 aaKnown RBP eCLIP7.02□□□□□ -1.291e-7■□□□□ 10.9
VEGFA-214ENST00000493786 FAM91A1Q658Y4 838 aa7.02□□□□□ -1.29
VEGFA-214ENST00000493786 TUBA3EQ6PEY2 450 aa7.02□□□□□ -1.29
VEGFA-214ENST00000493786 IL20RBQ6UXL0 311 aa7.02□□□□□ -1.29
VEGFA-214ENST00000493786 C16orf47Q6ZP98 133 aaPredicted RBP7.02□□□□□ -1.29
VEGFA-214ENST00000493786 RTL4Q6ZR62 310 aa7.02□□□□□ -1.29
VEGFA-214ENST00000493786 TRPM8Q7Z2W7 1104 aa7.02□□□□□ -1.29
VEGFA-214ENST00000493786 WDR53Q7Z5U6 358 aaPredicted RBP7.02□□□□□ -1.29
VEGFA-214ENST00000493786 ARPINQ7Z6K5 226 aa7.02□□□□□ -1.29
VEGFA-214ENST00000493786 RETREG3Q86VR2 466 aa7.02□□□□□ -1.29
VEGFA-214ENST00000493786 RNF130Q86XS8 419 aa7.02□□□□□ -1.29
VEGFA-214ENST00000493786 TREML1Q86YW5 311 aa7.02□□□□□ -1.29
VEGFA-214ENST00000493786 PRR22Q8IZ63 422 aa7.02□□□□□ -1.29
VEGFA-214ENST00000493786 ARMC10Q8N2F6 343 aa7.02□□□□□ -1.29
VEGFA-214ENST00000493786 AMER2Q8N7J2 671 aa7.02□□□□□ -1.29
VEGFA-214ENST00000493786 SLC16A11Q8NCK7 471 aa7.02□□□□□ -1.29
VEGFA-214ENST00000493786 FAM13CQ8NE31 585 aa7.02□□□□□ -1.29
VEGFA-214ENST00000493786 OR52N2Q8NGI0 321 aa7.02□□□□□ -1.29
VEGFA-214ENST00000493786 OR5M3Q8NGP4 307 aa7.02□□□□□ -1.29
VEGFA-214ENST00000493786 PNPT1Q8TCS8 783 aaKnown RBP7.02□□□□□ -1.29
VEGFA-214ENST00000493786 MIPOL1Q8TD10 442 aa7.02□□□□□ -1.29
VEGFA-214ENST00000493786 XAGE5Q8WWM1 108 aa7.02□□□□□ -1.29
VEGFA-214ENST00000493786 TTC9Q92623 222 aa7.02□□□□□ -1.29
VEGFA-214ENST00000493786 CDS1Q92903 461 aa7.02□□□□□ -1.29
VEGFA-214ENST00000493786 TMBIM1Q969X1 311 aa7.02□□□□□ -1.29
VEGFA-214ENST00000493786 LRRC58Q96CX6 371 aa7.02□□□□□ -1.29
VEGFA-214ENST00000493786 TMCO6Q96DC7 493 aa7.02□□□□□ -1.29
VEGFA-214ENST00000493786 SPACA9Q96E40 222 aaPredicted RBP7.02□□□□□ -1.29
VEGFA-214ENST00000493786 OMA1Q96E52 524 aa7.02□□□□□ -1.29
VEGFA-214ENST00000493786 GIMAP5Q96F15 307 aa7.02□□□□□ -1.29
VEGFA-214ENST00000493786 OTUB1Q96FW1 271 aaPredicted RBP7.02□□□□□ -1.29
VEGFA-214ENST00000493786 AURKBQ96GD4 344 aaPredicted RBP7.02□□□□□ -1.29
VEGFA-214ENST00000493786 C16orf58Q96GQ5 468 aa7.02□□□□□ -1.29
VEGFA-214ENST00000493786 COL21A1Q96P44 957 aa7.02□□□□□ -1.29
VEGFA-214ENST00000493786 OR7D2Q96RA2 312 aa7.02□□□□□ -1.29
VEGFA-214ENST00000493786 THUMPD3Q9BV44 507 aaKnown RBP7.02□□□□□ -1.29
VEGFA-214ENST00000493786 BTBD2Q9BX70 525 aa7.02□□□□□ -1.29
VEGFA-214ENST00000493786 PIGUQ9H490 435 aa7.02□□□□□ -1.29
VEGFA-214ENST00000493786 TIMMDC1Q9NPL8 285 aa7.02□□□□□ -1.29
VEGFA-214ENST00000493786 GPATCH2Q9NW75 528 aa7.02□□□□□ -1.29
VEGFA-214ENST00000493786 GIN1Q9NXP7 522 aa7.02□□□□□ -1.29
VEGFA-214ENST00000493786 NDE1Q9NXR1 346 aa7.02□□□□□ -1.29
VEGFA-214ENST00000493786 ANKRD10Q9NXR5 420 aa7.02□□□□□ -1.29
VEGFA-214ENST00000493786 VAPAQ9P0L0 249 aa7.02□□□□□ -1.29
VEGFA-214ENST00000493786 LRFN1Q9P244 771 aa7.02□□□□□ -1.29
VEGFA-214ENST00000493786 P2RX2Q9UBL9 471 aa7.02□□□□□ -1.29
VEGFA-214ENST00000493786 LHX6Q9UPM6 363 aa7.02□□□□□ -1.29
VEGFA-214ENST00000493786 TP53TG5Q9Y2B4 290 aa7.02□□□□□ -1.29
VEGFA-214ENST00000493786 PCSK5Q92824 1860 aa7.02□□□□□ -1.29
VEGFA-214ENST00000493786 MAP1BP46821 2468 aaKnown RBP7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms