RNA–Protein interactions for RNA: ENST00000493732.5

NPHP3-209, Transcript of nephrocystin 3, humanhuman

TSL 2

Gene NPHP3, Length 1,933 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-209ENST00000493732 YIPF4Q9BSR8 244 aa9.05□□□□□ -0.96
NPHP3-209ENST00000493732 RSPO3Q9BXY4 272 aaPredicted RBP9.05□□□□□ -0.96
NPHP3-209ENST00000493732 ARMC7Q9H6L4 198 aa9.05□□□□□ -0.96
NPHP3-209ENST00000493732 CERS4Q9HA82 394 aa9.05□□□□□ -0.96
NPHP3-209ENST00000493732 HHATLQ9HCP6 504 aa9.05□□□□□ -0.96
NPHP3-209ENST00000493732 LYRM4Q9HD34 91 aa9.05□□□□□ -0.96
NPHP3-209ENST00000493732 EXOSC4Q9NPD3 245 aaKnown RBP9.05□□□□□ -0.96
NPHP3-209ENST00000493732 ABCB10Q9NRK6 738 aa9.05□□□□□ -0.96
NPHP3-209ENST00000493732 TBC1D29Q9UFV1 150 aa9.05□□□□□ -0.96
NPHP3-209ENST00000493732 TESQ9UGI8 421 aaKnown RBP9.05□□□□□ -0.96
NPHP3-209ENST00000493732 MSRAQ9UJ68 235 aa9.05□□□□□ -0.96
NPHP3-209ENST00000493732 PAIP2BQ9ULR5 123 aaKnown RBP9.05□□□□□ -0.96
NPHP3-209ENST00000493732 SLC6A14Q9UN76 642 aa9.05□□□□□ -0.96
NPHP3-209ENST00000493732 DOLKQ9UPQ8 538 aa9.05□□□□□ -0.96
NPHP3-209ENST00000493732 TRAPPC4Q9Y296 219 aa9.05□□□□□ -0.96
NPHP3-209ENST00000493732 YBX2Q9Y2T7 364 aaKnown RBP9.05□□□□□ -0.96
NPHP3-209ENST00000493732 A0A087WUU8 490 aa9.05□□□□□ -0.96
NPHP3-209ENST00000493732 HYKKA2RU49 373 aa9.05□□□□□ -0.96
NPHP3-209ENST00000493732 LRRC72A6NJI9 287 aa9.05□□□□□ -0.96
NPHP3-209ENST00000493732 ZNF670-ZNF695F2Z2N8 137 aa9.05□□□□□ -0.96
NPHP3-209ENST00000493732 ZSCAN9O15535 394 aaPredicted RBP9.05□□□□□ -0.96
NPHP3-209ENST00000493732 PRKYO43930 277 aa9.05□□□□□ -0.96
NPHP3-209ENST00000493732 CSO75390 466 aaKnown RBP9.05□□□□□ -0.96
NPHP3-209ENST00000493732 AK1P00568 194 aa9.05□□□□□ -0.96
NPHP3-209ENST00000493732 IL1AP01583 271 aa9.05□□□□□ -0.96
NPHP3-209ENST00000493732 THBS1P07996 1170 aa9.05□□□□□ -0.96
NPHP3-209ENST00000493732 C8orf89P0DMQ9 161 aa9.05□□□□□ -0.96
NPHP3-209ENST00000493732 CPEP16870 476 aa9.05□□□□□ -0.96
NPHP3-209ENST00000493732 DRD1P21728 446 aa9.05□□□□□ -0.96
NPHP3-209ENST00000493732 TGFBR1P36897 503 aa9.05□□□□□ -0.96
NPHP3-209ENST00000493732 WNT4P56705 351 aa9.05□□□□□ -0.96
NPHP3-209ENST00000493732 RGS8P57771 180 aaPredicted RBP9.05□□□□□ -0.96
NPHP3-209ENST00000493732 BNC1Q01954 994 aa9.05□□□□□ -0.96
NPHP3-209ENST00000493732 CHRNEQ04844 493 aa9.05□□□□□ -0.96
NPHP3-209ENST00000493732 RAB30Q15771 203 aa9.05□□□□□ -0.96
NPHP3-209ENST00000493732 SSX1Q16384 188 aa9.05□□□□□ -0.96
NPHP3-209ENST00000493732 ARHGAP11BQ3KRB8 267 aa9.05□□□□□ -0.96
NPHP3-209ENST00000493732 MINDY4Q4G0A6 757 aa9.05□□□□□ -0.96
NPHP3-209ENST00000493732 FAM109BQ6ICB4 259 aaPredicted RBP9.05□□□□□ -0.96
NPHP3-209ENST00000493732 MFSD12Q6NUT3 480 aa9.05□□□□□ -0.96
NPHP3-209ENST00000493732 VN1R4Q7Z5H5 301 aa9.05□□□□□ -0.96
NPHP3-209ENST00000493732 LAPTM4BQ86VI4 370 aa9.05□□□□□ -0.96
NPHP3-209ENST00000493732 OR2L13Q8N349 312 aa9.05□□□□□ -0.96
NPHP3-209ENST00000493732 CLDN22Q8N7P3 220 aa9.05□□□□□ -0.96
NPHP3-209ENST00000493732 SETD6Q8TBK2 473 aa9.05□□□□□ -0.96
NPHP3-209ENST00000493732 DIO2Q92813 273 aa9.05□□□□□ -0.96
NPHP3-209ENST00000493732 C16orf58Q96GQ5 468 aa9.05□□□□□ -0.96
NPHP3-209ENST00000493732 COQ7Q99807 217 aa9.05□□□□□ -0.96
NPHP3-209ENST00000493732 SLC30A2Q9BRI3 323 aa9.05□□□□□ -0.96
NPHP3-209ENST00000493732 ASPNQ9BXN1 380 aa9.05□□□□□ -0.96
NPHP3-209ENST00000493732 TWSG1Q9GZX9 223 aa9.05□□□□□ -0.96
NPHP3-209ENST00000493732 SYNDIG1Q9H7V2 258 aa9.05□□□□□ -0.96
NPHP3-209ENST00000493732 SCHIP1Q9P0W5 487 aaPredicted RBP9.05□□□□□ -0.96
NPHP3-209ENST00000493732 FBXL21Q9UKT6 434 aa9.05□□□□□ -0.96
NPHP3-209ENST00000493732 GIMAP1-GIMAP5A0A087WTJ2 511 aa9.04□□□□□ -0.96
NPHP3-209ENST00000493732 A0A087WV62 115 aa9.04□□□□□ -0.96
NPHP3-209ENST00000493732 A0A1W2PQF6 199 aa9.04□□□□□ -0.96
NPHP3-209ENST00000493732 OR5K4A6NMS3 321 aa9.04□□□□□ -0.96
NPHP3-209ENST00000493732 C4orf51C9J302 202 aa9.04□□□□□ -0.96
NPHP3-209ENST00000493732 CHST10O43529 356 aa9.04□□□□□ -0.96
NPHP3-209ENST00000493732 PRKRAO75569 313 aaKnown RBP9.04□□□□□ -0.96
NPHP3-209ENST00000493732 GPX5O75715 221 aa9.04□□□□□ -0.96
NPHP3-209ENST00000493732 UBXN7O94888 489 aa9.04□□□□□ -0.96
NPHP3-209ENST00000493732 KLF8O95600 359 aaPredicted RBP9.04□□□□□ -0.96
NPHP3-209ENST00000493732 EPPINO95925 133 aa9.04□□□□□ -0.96
NPHP3-209ENST00000493732 TSPAN19P0C672 248 aa9.04□□□□□ -0.96
NPHP3-209ENST00000493732 ZNF888P0CJ79 500 aaPredicted RBP9.04□□□□□ -0.96
NPHP3-209ENST00000493732 SMIM10L1P0DMW3 83 aa9.04□□□□□ -0.96
NPHP3-209ENST00000493732 AKT2P31751 481 aa9.04□□□□□ -0.96
NPHP3-209ENST00000493732 ACTR1BP42025 376 aa9.04□□□□□ -0.96
NPHP3-209ENST00000493732 MTNR1AP48039 350 aa9.04□□□□□ -0.96
NPHP3-209ENST00000493732 ACTR1AP61163 376 aa9.04□□□□□ -0.96
NPHP3-209ENST00000493732 DUSP8Q13202 625 aa9.04□□□□□ -0.96
NPHP3-209ENST00000493732 PLEKHM3Q6ZWE6 761 aa9.04□□□□□ -0.96
NPHP3-209ENST00000493732 CCDC190Q86UF4 302 aa9.04□□□□□ -0.96
NPHP3-209ENST00000493732 RANBP3LQ86VV4 465 aaPredicted RBP9.04□□□□□ -0.96
NPHP3-209ENST00000493732 TRIM48Q8IWZ4 208 aa9.04□□□□□ -0.96
NPHP3-209ENST00000493732 FAM20CQ8IXL6 584 aa9.04□□□□□ -0.96
NPHP3-209ENST00000493732 POC5Q8NA72 575 aa9.04□□□□□ -0.96
NPHP3-209ENST00000493732 OR52I1Q8NGK6 324 aa9.04□□□□□ -0.96
NPHP3-209ENST00000493732 OR1E3Q8WZA6 343 aa9.04□□□□□ -0.96
NPHP3-209ENST00000493732 RERGQ96A58 199 aaPredicted RBP9.04□□□□□ -0.96
NPHP3-209ENST00000493732 TMCO6Q96DC7 493 aa9.04□□□□□ -0.96
NPHP3-209ENST00000493732 GIMAP5Q96F15 307 aa9.04□□□□□ -0.96
NPHP3-209ENST00000493732 SMIM10Q96HG1 83 aa9.04□□□□□ -0.96
NPHP3-209ENST00000493732 C10orf90Q96M02 699 aa9.04□□□□□ -0.96
NPHP3-209ENST00000493732 OR2A5Q96R48 311 aa9.04□□□□□ -0.96
NPHP3-209ENST00000493732 MACROD1Q9BQ69 325 aa9.04□□□□□ -0.96
NPHP3-209ENST00000493732 CNPPD1Q9BV87 410 aa9.04□□□□□ -0.96
NPHP3-209ENST00000493732 SAP130Q9H0E3 1048 aa9.04□□□□□ -0.96
NPHP3-209ENST00000493732 TAS2R16Q9NYV7 291 aa9.04□□□□□ -0.96
NPHP3-209ENST00000493732 ITGB1BP2Q9UKP3 347 aa9.04□□□□□ -0.96
NPHP3-209ENST00000493732 DAPP1Q9UN19 280 aa9.04□□□□□ -0.96
NPHP3-209ENST00000493732 GSTK1Q9Y2Q3 226 aa9.04□□□□□ -0.96
NPHP3-209ENST00000493732 WDR45Q9Y484 360 aa9.04□□□□□ -0.96
NPHP3-209ENST00000493732 PCDHGB6Q9Y5F9 930 aa9.04□□□□□ -0.96
NPHP3-209ENST00000493732 IQCMA0A1B0GVH7 501 aa9.03□□□□□ -0.96
NPHP3-209ENST00000493732 WASHC1A8K0Z3 465 aa9.03□□□□□ -0.96
NPHP3-209ENST00000493732 KDM4EB2RXH2 506 aaPredicted RBP9.03□□□□□ -0.96
NPHP3-209ENST00000493732 BOLA2-SMG1P6H3BVE0 249 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms