RNA–Protein interactions for RNA: ENST00000493161.1

SAMM50-204, Transcript of SAMM50 sorting and assembly machinery component, human

TSL 3

Gene SAMM50, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SAMM50-204	ENST00000493161	RPS27L	Q71UM5	84 aa	Known RBP	12.37	□□□□□ -0.43
SAMM50-204	ENST00000493161	P4HA3	Q7Z4N8	544 aa		12.37	□□□□□ -0.43
SAMM50-204	ENST00000493161	CTAGE4	Q8IX94	777 aa		12.37	□□□□□ -0.43
SAMM50-204	ENST00000493161	UBQLNL	Q8IYU4	475 aa		12.37	□□□□□ -0.43
SAMM50-204	ENST00000493161	METTL4	Q8N3J2	472 aa		12.37	□□□□□ -0.43
SAMM50-204	ENST00000493161	TM4SF18	Q96CE8	201 aa		12.37	□□□□□ -0.43
SAMM50-204	ENST00000493161	MRRF	Q96E11	262 aa	Known RBP	12.37	□□□□□ -0.43
SAMM50-204	ENST00000493161	CNRIP1	Q96F85	164 aa	Predicted RBP	12.37	□□□□□ -0.43
SAMM50-204	ENST00000493161	PGM2	Q96G03	612 aa		12.37	□□□□□ -0.43
SAMM50-204	ENST00000493161	ZNF681	Q96N22	645 aa		12.37	□□□□□ -0.43
SAMM50-204	ENST00000493161	COL21A1	Q96P44	957 aa		12.37	□□□□□ -0.43
SAMM50-204	ENST00000493161	FRG2B	Q96QU4	278 aa		12.37	□□□□□ -0.43
SAMM50-204	ENST00000493161	ADO	Q96SZ5	270 aa		12.37	□□□□□ -0.43
SAMM50-204	ENST00000493161	ZBTB26	Q9HCK0	441 aa		12.37	□□□□□ -0.43
SAMM50-204	ENST00000493161	WHRN	Q9P202	907 aa		12.37	□□□□□ -0.43
SAMM50-204	ENST00000493161	ADAM29	Q9UKF5	820 aa		12.37	□□□□□ -0.43
SAMM50-204	ENST00000493161	DLGAP4	Q9Y2H0	992 aa		12.37	□□□□□ -0.43
SAMM50-204	ENST00000493161	GPR55	Q9Y2T6	319 aa	Predicted RBP	12.37	□□□□□ -0.43
SAMM50-204	ENST00000493161	CSPG4	Q6UVK1	2322 aa		12.36	□□□□□ -0.43
SAMM50-204	ENST00000493161		A0A087X1B8	175 aa		12.36	□□□□□ -0.43
SAMM50-204	ENST00000493161	FRG2C	A6NGY1	282 aa		12.36	□□□□□ -0.43
SAMM50-204	ENST00000493161	OR6C70	A6NIJ9	312 aa		12.36	□□□□□ -0.43
SAMM50-204	ENST00000493161	SLC22A20	A6NK97	555 aa		12.36	□□□□□ -0.43
SAMM50-204	ENST00000493161	T	O15178	435 aa		12.36	□□□□□ -0.43
SAMM50-204	ENST00000493161	GSTA2	P09210	222 aa		12.36	□□□□□ -0.43
SAMM50-204	ENST00000493161	CSNK2A2	P19784	350 aa	Predicted RBP	12.36	□□□□□ -0.43
SAMM50-204	ENST00000493161	GRK2	P25098	689 aa		12.36	□□□□□ -0.43
SAMM50-204	ENST00000493161	DPP4	P27487	766 aa		12.36	□□□□□ -0.43
SAMM50-204	ENST00000493161	DEK	P35659	375 aa	Known RBP	12.36	□□□□□ -0.43
SAMM50-204	ENST00000493161	PTH2R	P49190	550 aa		12.36	□□□□□ -0.43
SAMM50-204	ENST00000493161	SUCLG1	P53597	346 aa	Known RBP	12.36	□□□□□ -0.43
SAMM50-204	ENST00000493161	GAS1	P54826	345 aa		12.36	□□□□□ -0.43
SAMM50-204	ENST00000493161	PPP2R2B	Q00005	443 aa		12.36	□□□□□ -0.43
SAMM50-204	ENST00000493161	TRAF3	Q13114	568 aa		12.36	□□□□□ -0.43
SAMM50-204	ENST00000493161	CALCOCO2	Q13137	446 aa		12.36	□□□□□ -0.43
SAMM50-204	ENST00000493161	ACAP2	Q15057	778 aa		12.36	□□□□□ -0.43
SAMM50-204	ENST00000493161	TRADD	Q15628	312 aa		12.36	□□□□□ -0.43
SAMM50-204	ENST00000493161	FAM83E	Q2M2I3	478 aa		12.36	□□□□□ -0.43
SAMM50-204	ENST00000493161	COMMD6	Q7Z4G1	85 aa		12.36	□□□□□ -0.43
SAMM50-204	ENST00000493161	CCDC25	Q86WR0	208 aa		12.36	□□□□□ -0.43
SAMM50-204	ENST00000493161	PLD6	Q8N2A8	252 aa	Known RBP	12.36	□□□□□ -0.43
SAMM50-204	ENST00000493161	PTGR2	Q8N8N7	351 aa	Predicted RBP	12.36	□□□□□ -0.43
SAMM50-204	ENST00000493161	ZNF610	Q8N9Z0	462 aa		12.36	□□□□□ -0.43
SAMM50-204	ENST00000493161	SPATA3	Q8NHX4	192 aa		12.36	□□□□□ -0.43
SAMM50-204	ENST00000493161	IGFBPL1	Q8WX77	278 aa		12.36	□□□□□ -0.43
SAMM50-204	ENST00000493161	ATP6V1E2	Q96A05	226 aa		12.36	□□□□□ -0.43
SAMM50-204	ENST00000493161	KLHL29	Q96CT2	875 aa		12.36	□□□□□ -0.43
SAMM50-204	ENST00000493161	TMCO6	Q96DC7	493 aa		12.36	□□□□□ -0.43
SAMM50-204	ENST00000493161	ERP44	Q9BS26	406 aa		12.36	□□□□□ -0.43
SAMM50-204	ENST00000493161	KCNF1	Q9H3M0	494 aa		12.36	□□□□□ -0.43
SAMM50-204	ENST00000493161	ZNF226	Q9NYT6	803 aa		12.36	□□□□□ -0.43
SAMM50-204	ENST00000493161	DKKL1	Q9UK85	242 aa		12.36	□□□□□ -0.43
SAMM50-204	ENST00000493161	CFL2	Q9Y281	166 aa		12.36	□□□□□ -0.43
SAMM50-204	ENST00000493161	SAR1B	Q9Y6B6	198 aa		12.36	□□□□□ -0.43
SAMM50-204	ENST00000493161	ANK3	Q12955	4377 aa	Known RBP	12.35	□□□□□ -0.43
SAMM50-204	ENST00000493161	C1orf226	A1L170	272 aa		12.35	□□□□□ -0.43
SAMM50-204	ENST00000493161	GOLGA6L10	A6NI86	522 aa		12.35	□□□□□ -0.43
SAMM50-204	ENST00000493161	PPP6C	O00743	305 aa		12.35	□□□□□ -0.43
SAMM50-204	ENST00000493161	RAD51C	O43502	376 aa		12.35	□□□□□ -0.43
SAMM50-204	ENST00000493161	TSPAN2	O60636	221 aa		12.35	□□□□□ -0.43
SAMM50-204	ENST00000493161	KLHL2	O95198	593 aa		12.35	□□□□□ -0.43
SAMM50-204	ENST00000493161	CRH	P06850	196 aa		12.35	□□□□□ -0.43
SAMM50-204	ENST00000493161	CT45A8	P0DMV1	189 aa		12.35	□□□□□ -0.43
SAMM50-204	ENST00000493161	CT45A9	P0DMV2	189 aa		12.35	□□□□□ -0.43
SAMM50-204	ENST00000493161	POU2F1	P14859	743 aa		12.35	□□□□□ -0.43
SAMM50-204	ENST00000493161	CCNG1	P51959	295 aa		12.35	□□□□□ -0.43
SAMM50-204	ENST00000493161	NR1H2	P55055	460 aa		12.35	□□□□□ -0.43
SAMM50-204	ENST00000493161	EEF1A1	P68104	462 aa	Known RBP	12.35	□□□□□ -0.43
SAMM50-204	ENST00000493161	KRTAP1-1	Q07627	177 aa		12.35	□□□□□ -0.43
SAMM50-204	ENST00000493161	CAPRIN1	Q14444	709 aa	Known RBP	12.35	□□□□□ -0.43
SAMM50-204	ENST00000493161	CT45A2	Q5DJT8	189 aa		12.35	□□□□□ -0.43
SAMM50-204	ENST00000493161	EEF1A1P5	Q5VTE0	462 aa		12.35	□□□□□ -0.43
SAMM50-204	ENST00000493161	TTC19	Q6DKK2	380 aa	Predicted RBP	12.35	□□□□□ -0.43
SAMM50-204	ENST00000493161	NPSR1	Q6W5P4	371 aa		12.35	□□□□□ -0.43
SAMM50-204	ENST00000493161	PAGE2	Q7Z2X7	111 aa		12.35	□□□□□ -0.43
SAMM50-204	ENST00000493161	OR4N2	Q8NGD1	307 aa		12.35	□□□□□ -0.43
SAMM50-204	ENST00000493161	OR5M1	Q8NGP8	315 aa		12.35	□□□□□ -0.43
SAMM50-204	ENST00000493161	RNF138	Q8WVD3	245 aa		12.35	□□□□□ -0.43
SAMM50-204	ENST00000493161	PHF21B	Q96EK2	531 aa		12.35	□□□□□ -0.43
SAMM50-204	ENST00000493161	SLC35A4	Q96G79	324 aa		12.35	□□□□□ -0.43
SAMM50-204	ENST00000493161	GSX2	Q9BZM3	304 aa		12.35	□□□□□ -0.43
SAMM50-204	ENST00000493161	PCTP	Q9UKL6	214 aa		12.35	□□□□□ -0.43
SAMM50-204	ENST00000493161	SLC12A4	Q9UP95	1085 aa		12.35	□□□□□ -0.43
SAMM50-204	ENST00000493161	MRPS18C	Q9Y3D5	142 aa	Known RBP	12.35	□□□□□ -0.43
SAMM50-204	ENST00000493161	TNPO3	Q9Y5L0	923 aa	Known RBP	12.35	□□□□□ -0.43
SAMM50-204	ENST00000493161	HIVEP2	P31629	2446 aa		12.35	□□□□□ -0.43
SAMM50-204	ENST00000493161	COL6A5	A8TX70	2615 aa		12.34	□□□□□ -0.43
SAMM50-204	ENST00000493161	DSCAM	O60469	2012 aa		12.34	□□□□□ -0.43
SAMM50-204	ENST00000493161		A0A096LPK6	155 aa		12.34	□□□□□ -0.43
SAMM50-204	ENST00000493161	C16orf97	H3BN30	126 aa		12.34	□□□□□ -0.43
SAMM50-204	ENST00000493161	PLAU	P00749	431 aa		12.34	□□□□□ -0.43
SAMM50-204	ENST00000493161	PDYN	P01213	254 aa		12.34	□□□□□ -0.43
SAMM50-204	ENST00000493161	ALDOA	P04075	364 aa	Known RBP	12.34	□□□□□ -0.43
SAMM50-204	ENST00000493161	THBD	P07204	575 aa		12.34	□□□□□ -0.43
SAMM50-204	ENST00000493161	MAGEA4	P43358	317 aa		12.34	□□□□□ -0.43
SAMM50-204	ENST00000493161	KCNJ5	P48544	419 aa		12.34	□□□□□ -0.43
SAMM50-204	ENST00000493161	ALDH9A1	P49189	494 aa		12.34	□□□□□ -0.43
SAMM50-204	ENST00000493161	PCYT1A	P49585	367 aa		12.34	□□□□□ -0.43
SAMM50-204	ENST00000493161	PLTP	P55058	493 aa		12.34	□□□□□ -0.43
SAMM50-204	ENST00000493161	GNG11	P61952	73 aa		12.34	□□□□□ -0.43

Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms