RNA–Protein interactions for RNA: ENST00000490699.1

VARS2-210, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 3

Gene VARS2, Length 719 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-210ENST00000490699 TLE3Q04726 772 aa10.15□□□□□ -0.78
VARS2-210ENST00000490699 RBBP4Q09028 425 aa10.15□□□□□ -0.78
VARS2-210ENST00000490699 ZNF630Q2M218 657 aaPredicted RBP10.15□□□□□ -0.78
VARS2-210ENST00000490699 CYP27C1Q4G0S4 372 aa10.15□□□□□ -0.78
VARS2-210ENST00000490699 GPAT3Q53EU6 434 aa10.15□□□□□ -0.78
VARS2-210ENST00000490699 CRB2Q5IJ48 1285 aa10.15□□□□□ -0.78
VARS2-210ENST00000490699 AGAP7PQ5VUJ5 663 aa10.15□□□□□ -0.78
VARS2-210ENST00000490699 OPN5Q6U736 354 aa10.15□□□□□ -0.78
VARS2-210ENST00000490699 RINLQ6ZS11 566 aa10.15□□□□□ -0.78
VARS2-210ENST00000490699 ZNF771Q7L3S4 317 aaPredicted RBP10.15□□□□□ -0.78
VARS2-210ENST00000490699 IFNEQ86WN2 208 aa10.15□□□□□ -0.78
VARS2-210ENST00000490699 RPS19BP1Q86WX3 136 aaKnown RBP10.15□□□□□ -0.78
VARS2-210ENST00000490699 PROSER1Q86XN7 944 aa10.15□□□□□ -0.78
VARS2-210ENST00000490699 KRT73Q86Y46 540 aa10.15□□□□□ -0.78
VARS2-210ENST00000490699 C9orf40Q8IXQ3 194 aa10.15□□□□□ -0.78
VARS2-210ENST00000490699 GALNT16Q8N428 558 aa10.15□□□□□ -0.78
VARS2-210ENST00000490699 TMEM156Q8N614 296 aa10.15□□□□□ -0.78
VARS2-210ENST00000490699 SLC15A4Q8N697 577 aa10.15□□□□□ -0.78
VARS2-210ENST00000490699 C11orf65Q8NCR3 313 aa10.15□□□□□ -0.78
VARS2-210ENST00000490699 OR2T12Q8NG77 320 aa10.15□□□□□ -0.78
VARS2-210ENST00000490699 THAP3Q8WTV1 239 aaPredicted RBP10.15□□□□□ -0.78
VARS2-210ENST00000490699 APOBEC4Q8WW27 367 aaKnown RBP10.15□□□□□ -0.78
VARS2-210ENST00000490699 ASB15Q8WXK1 588 aa10.15□□□□□ -0.78
VARS2-210ENST00000490699 VSTM2LQ96N03 204 aa10.15□□□□□ -0.78
VARS2-210ENST00000490699 AGAP4Q96P64 663 aa10.15□□□□□ -0.78
VARS2-210ENST00000490699 RAB3IPQ96QF0 476 aaPredicted RBP10.15□□□□□ -0.78
VARS2-210ENST00000490699 BTBD2Q9BX70 525 aa10.15□□□□□ -0.78
VARS2-210ENST00000490699 ING2Q9H160 280 aa10.15□□□□□ -0.78
VARS2-210ENST00000490699 MMADHCQ9H3L0 296 aaPredicted RBP10.15□□□□□ -0.78
VARS2-210ENST00000490699 ALG2Q9H553 416 aa10.15□□□□□ -0.78
VARS2-210ENST00000490699 ANKRA2Q9H9E1 313 aa10.15□□□□□ -0.78
VARS2-210ENST00000490699 GPATCH2Q9NW75 528 aa10.15□□□□□ -0.78
VARS2-210ENST00000490699 MYOTQ9UBF9 498 aa10.15□□□□□ -0.78
VARS2-210ENST00000490699 CBLCQ9ULV8 474 aa10.15□□□□□ -0.78
VARS2-210ENST00000490699 YARS2Q9Y2Z4 477 aaKnown RBP10.15□□□□□ -0.78
VARS2-210ENST00000490699 SPTBN2O15020 2390 aa10.15□□□□□ -0.79
VARS2-210ENST00000490699 GIMAP1-GIMAP5A0A087WTJ2 511 aa10.14□□□□□ -0.79
VARS2-210ENST00000490699 ERICH4A6NGS2 130 aa10.14□□□□□ -0.79
VARS2-210ENST00000490699 FAM220BPB1ANY3 271 aa10.14□□□□□ -0.79
VARS2-210ENST00000490699 WWP2O00308 870 aa10.14□□□□□ -0.79
VARS2-210ENST00000490699 CDK2AP1O14519 115 aa10.14□□□□□ -0.79
VARS2-210ENST00000490699 TP53I11O14683 189 aa10.14□□□□□ -0.79
VARS2-210ENST00000490699 SLC28A2O43868 658 aa10.14□□□□□ -0.79
VARS2-210ENST00000490699 CIB2O75838 187 aa10.14□□□□□ -0.79
VARS2-210ENST00000490699 PDE9AO76083 593 aa10.14□□□□□ -0.79
VARS2-210ENST00000490699 NKX2-2O95096 273 aa10.14□□□□□ -0.79
VARS2-210ENST00000490699 IFNA14P01570 189 aa10.14□□□□□ -0.79
VARS2-210ENST00000490699 OR12D1P0DN82 309 aa10.14□□□□□ -0.79
VARS2-210ENST00000490699 T-ENOLP0DO92 83 aa10.14□□□□□ -0.79
VARS2-210ENST00000490699 ITGAMP11215 1152 aa10.14□□□□□ -0.79
VARS2-210ENST00000490699 ETFAP13804 333 aa10.14□□□□□ -0.79
VARS2-210ENST00000490699 HOXB9P17482 250 aaPredicted RBP10.14□□□□□ -0.79
VARS2-210ENST00000490699 LCN1P31025 176 aa10.14□□□□□ -0.79
VARS2-210ENST00000490699 PGM1P36871 562 aa10.14□□□□□ -0.79
VARS2-210ENST00000490699 RFX3P48380 749 aa10.14□□□□□ -0.79
VARS2-210ENST00000490699 CLK3P49761 638 aaKnown RBP10.14□□□□□ -0.79
VARS2-210ENST00000490699 CASP9P55211 416 aa10.14□□□□□ -0.79
VARS2-210ENST00000490699 LIPEQ05469 1076 aa10.14□□□□□ -0.79
VARS2-210ENST00000490699 CHAF1BQ13112 559 aa10.14□□□□□ -0.79
VARS2-210ENST00000490699 SRSF6Q13247 344 aaKnown RBP10.14□□□□□ -0.79
VARS2-210ENST00000490699 EFR3AQ14156 821 aa10.14□□□□□ -0.79
VARS2-210ENST00000490699 NNATQ16517 81 aa10.14□□□□□ -0.79
VARS2-210ENST00000490699 DUSP5Q16690 384 aa10.14□□□□□ -0.79
VARS2-210ENST00000490699 LACTB2Q53H82 288 aaPredicted RBP10.14□□□□□ -0.79
VARS2-210ENST00000490699 RABL3Q5HYI8 236 aa10.14□□□□□ -0.79
VARS2-210ENST00000490699 ATP1A1-AS1Q5TC04 95 aa10.14□□□□□ -0.79
VARS2-210ENST00000490699 MSRB3Q8IXL7 192 aa10.14□□□□□ -0.79
VARS2-210ENST00000490699 GPALPP1Q8IXQ4 340 aa10.14□□□□□ -0.79
VARS2-210ENST00000490699 SLC34A3Q8N130 599 aa10.14□□□□□ -0.79
VARS2-210ENST00000490699 KIF2BQ8N4N8 673 aa10.14□□□□□ -0.79
VARS2-210ENST00000490699 HORMAD2Q8N7B1 307 aa10.14□□□□□ -0.79
VARS2-210ENST00000490699 ZNF321PQ8N8H1 164 aa10.14□□□□□ -0.79
VARS2-210ENST00000490699 ZNF527Q8NB42 609 aa10.14□□□□□ -0.79
VARS2-210ENST00000490699 SLC16A11Q8NCK7 471 aa10.14□□□□□ -0.79
VARS2-210ENST00000490699 OR5D16Q8NGK9 328 aa10.14□□□□□ -0.79
VARS2-210ENST00000490699 OR10A6Q8NH74 314 aa10.14□□□□□ -0.79
VARS2-210ENST00000490699 BRIX1Q8TDN6 353 aaKnown RBP10.14□□□□□ -0.79
VARS2-210ENST00000490699 TM9SF4Q92544 642 aa10.14□□□□□ -0.79
VARS2-210ENST00000490699 CDS1Q92903 461 aa10.14□□□□□ -0.79
VARS2-210ENST00000490699 TMEM125Q96AQ2 219 aa10.14□□□□□ -0.79
VARS2-210ENST00000490699 GIMAP5Q96F15 307 aa10.14□□□□□ -0.79
VARS2-210ENST00000490699 RMND5BQ96G75 393 aaPredicted RBP10.14□□□□□ -0.79
VARS2-210ENST00000490699 C16orf58Q96GQ5 468 aa10.14□□□□□ -0.79
VARS2-210ENST00000490699 REXO5Q96IC2 774 aaKnown RBP10.14□□□□□ -0.79
VARS2-210ENST00000490699 CDRT15Q96T59 188 aa10.14□□□□□ -0.79
VARS2-210ENST00000490699 GPATCH1Q9BRR8 931 aaKnown RBP10.14□□□□□ -0.79
VARS2-210ENST00000490699 THTPAQ9BU02 230 aa10.14□□□□□ -0.79
VARS2-210ENST00000490699 SPATA5L1Q9BVQ7 753 aa10.14□□□□□ -0.79
VARS2-210ENST00000490699 TRIM15Q9C019 465 aa10.14□□□□□ -0.79
VARS2-210ENST00000490699 LRMDAQ9H2I8 198 aa10.14□□□□□ -0.79
VARS2-210ENST00000490699 TMEM38AQ9H6F2 299 aa10.14□□□□□ -0.79
VARS2-210ENST00000490699 EPS8L2Q9H6S3 715 aa10.14□□□□□ -0.79
VARS2-210ENST00000490699 KAT8Q9H7Z6 458 aaKnown RBP10.14□□□□□ -0.79
VARS2-210ENST00000490699 HHATLQ9HCP6 504 aa10.14□□□□□ -0.79
VARS2-210ENST00000490699 POLE3Q9NRF9 147 aa10.14□□□□□ -0.79
VARS2-210ENST00000490699 SLC6A13Q9NSD5 602 aa10.14□□□□□ -0.79
VARS2-210ENST00000490699 GPR83Q9NYM4 423 aa10.14□□□□□ -0.79
VARS2-210ENST00000490699 TAS2R1Q9NYW7 299 aa10.14□□□□□ -0.79
VARS2-210ENST00000490699 GPR55Q9Y2T6 319 aaPredicted RBP10.14□□□□□ -0.79
VARS2-210ENST00000490699 A0A087WV48 116 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms