RNA–Protein interactions for RNA: ENST00000490667.1

SHC1-211, Transcript of SHC adaptor protein 1, humanhuman

TSL 2

Gene SHC1, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1-211ENST00000490667 ACAD11Q709F0 780 aa12.04□□□□□ -0.48
SHC1-211ENST00000490667 ZNF551Q7Z340 670 aaPredicted RBP12.04□□□□□ -0.48
SHC1-211ENST00000490667 CROCCP2Q86T23 111 aa12.04□□□□□ -0.48
SHC1-211ENST00000490667 RPRMLQ8N4K4 120 aa12.04□□□□□ -0.48
SHC1-211ENST00000490667 OR1J4Q8NGS1 313 aa12.04□□□□□ -0.48
SHC1-211ENST00000490667 CLHC1Q8NHS4 586 aa12.04□□□□□ -0.48
SHC1-211ENST00000490667 CA5BP1Q8WTZ4 195 aa12.04□□□□□ -0.48
SHC1-211ENST00000490667 RND1Q92730 232 aa12.04□□□□□ -0.48
SHC1-211ENST00000490667 PPCDCQ96CD2 204 aa12.04□□□□□ -0.48
SHC1-211ENST00000490667 ELP4Q96EB1 424 aa12.04□□□□□ -0.48
SHC1-211ENST00000490667 SLC35A4Q96G79 324 aa12.04□□□□□ -0.48
SHC1-211ENST00000490667 PKNOX2Q96KN3 472 aa12.04□□□□□ -0.48
SHC1-211ENST00000490667 C3orf30Q96M34 536 aa12.04□□□□□ -0.48
SHC1-211ENST00000490667 ADOQ96SZ5 270 aa12.04□□□□□ -0.48
SHC1-211ENST00000490667 KCNK9Q9NPC2 374 aa12.04□□□□□ -0.48
SHC1-211ENST00000490667 DDX18Q9NVP1 670 aaKnown RBP12.04□□□□□ -0.48
SHC1-211ENST00000490667 KLRF1Q9NZS2 232 aa12.04□□□□□ -0.48
SHC1-211ENST00000490667 SH3BP4Q9P0V3 963 aa12.04□□□□□ -0.48
SHC1-211ENST00000490667 C15orf41Q9Y2V0 281 aa12.04□□□□□ -0.48
SHC1-211ENST00000490667 OR10H1Q9Y4A9 318 aa12.04□□□□□ -0.48
SHC1-211ENST00000490667 ICE1Q9Y2F5 2266 aa12.04□□□□□ -0.48
SHC1-211ENST00000490667 ZGRF1Q86YA3 2104 aa12.04□□□□□ -0.48
SHC1-211ENST00000490667 SPTAN1Q13813 2472 aaKnown RBP12.03□□□□□ -0.48
SHC1-211ENST00000490667 CROCCQ5TZA2 2017 aa12.03□□□□□ -0.48
SHC1-211ENST00000490667 TMEM114B3SHH9 223 aa12.03□□□□□ -0.48
SHC1-211ENST00000490667 TM9SF1O15321 606 aa12.03□□□□□ -0.48
SHC1-211ENST00000490667 BIRC5O15392 142 aa12.03□□□□□ -0.48
SHC1-211ENST00000490667 PDPK1O15530 556 aa12.03□□□□□ -0.48
SHC1-211ENST00000490667 ITM2AO43736 263 aa12.03□□□□□ -0.48
SHC1-211ENST00000490667 TSPAN2O60636 221 aa12.03□□□□□ -0.48
SHC1-211ENST00000490667 HSPA4LO95757 839 aa12.03□□□□□ -0.48
SHC1-211ENST00000490667 SERPINE1P05121 402 aa12.03□□□□□ -0.48
SHC1-211ENST00000490667 HOXD4P09016 255 aaPredicted RBP12.03□□□□□ -0.48
SHC1-211ENST00000490667 ENDOUP21128 410 aaKnown RBP12.03□□□□□ -0.48
SHC1-211ENST00000490667 ELAVL4P26378 380 aaKnown RBP12.03□□□□□ -0.48
SHC1-211ENST00000490667 MAPK1P28482 360 aa12.03□□□□□ -0.48
SHC1-211ENST00000490667 IL12BP29460 328 aa12.03□□□□□ -0.48
SHC1-211ENST00000490667 PTGDSP41222 190 aa12.03□□□□□ -0.48
SHC1-211ENST00000490667 ASMTP46597 345 aa12.03□□□□□ -0.48
SHC1-211ENST00000490667 CDK9P50750 372 aaKnown RBP12.03□□□□□ -0.48
SHC1-211ENST00000490667 PNLIPRP2P54317 469 aa12.03□□□□□ -0.48
SHC1-211ENST00000490667 NUP107P57740 925 aa12.03□□□□□ -0.48
SHC1-211ENST00000490667 ZNF155Q12901 538 aaPredicted RBP12.03□□□□□ -0.48
SHC1-211ENST00000490667 EFR3AQ14156 821 aa12.03□□□□□ -0.48
SHC1-211ENST00000490667 MPP2Q14168 576 aa12.03□□□□□ -0.48
SHC1-211ENST00000490667 TOMM20Q15388 145 aa12.03□□□□□ -0.48
SHC1-211ENST00000490667 CYP27C1Q4G0S4 372 aa12.03□□□□□ -0.48
SHC1-211ENST00000490667 ZNF385BQ569K4 471 aa12.03□□□□□ -0.48
SHC1-211ENST00000490667 XKR7Q5GH72 579 aa12.03□□□□□ -0.48
SHC1-211ENST00000490667 LRIG3Q6UXM1 1119 aa12.03□□□□□ -0.48
SHC1-211ENST00000490667 LARP4Q71RC2 724 aaKnown RBP eCLIP12.03□□□□□ -0.48
SHC1-211ENST00000490667 OR2L13Q8N349 312 aa12.03□□□□□ -0.48
SHC1-211ENST00000490667 OR4N2Q8NGD1 307 aa12.03□□□□□ -0.48
SHC1-211ENST00000490667 ASB5Q8WWX0 329 aa12.03□□□□□ -0.48
SHC1-211ENST00000490667 MARVELD3Q96A59 401 aa12.03□□□□□ -0.48
SHC1-211ENST00000490667 CIDECQ96AQ7 238 aaPredicted RBP12.03□□□□□ -0.48
SHC1-211ENST00000490667 MTERF3Q96E29 417 aa12.03□□□□□ -0.48
SHC1-211ENST00000490667 PGM2Q96G03 612 aa12.03□□□□□ -0.48
SHC1-211ENST00000490667 ZNF764Q96H86 408 aaPredicted RBP12.03□□□□□ -0.48
SHC1-211ENST00000490667 OSBPL11Q9BXB4 747 aa12.03□□□□□ -0.48
SHC1-211ENST00000490667 UBQLN3Q9H347 655 aa12.03□□□□□ -0.48
SHC1-211ENST00000490667 GALNT9Q9HCQ5 603 aa12.03□□□□□ -0.48
SHC1-211ENST00000490667 GIMAP2Q9UG22 337 aa12.03□□□□□ -0.48
SHC1-211ENST00000490667 ACTL7BQ9Y614 415 aa12.03□□□□□ -0.48
SHC1-211ENST00000490667 C15orf38-AP3S2A0A0A6YYH1 394 aa12.02□□□□□ -0.49
SHC1-211ENST00000490667 PRAMEF25A6NGN4 478 aa12.02□□□□□ -0.49
SHC1-211ENST00000490667 WDR1O75083 606 aa12.02□□□□□ -0.49
SHC1-211ENST00000490667 LYPLA1O75608 230 aaPredicted RBP12.02□□□□□ -0.49
SHC1-211ENST00000490667 CBR3O75828 277 aa12.02□□□□□ -0.49
SHC1-211ENST00000490667 ZWINTO95229 277 aa12.02□□□□□ -0.49
SHC1-211ENST00000490667 PSMG1O95456 288 aa12.02□□□□□ -0.49
SHC1-211ENST00000490667 IFI6P09912 130 aa12.02□□□□□ -0.49
SHC1-211ENST00000490667 MYZAPP0CAP1 466 aa12.02□□□□□ -0.49
SHC1-211ENST00000490667 GABRA1P14867 456 aa12.02□□□□□ -0.49
SHC1-211ENST00000490667 PTPN6P29350 595 aa12.02□□□□□ -0.49
SHC1-211ENST00000490667 GPC1P35052 558 aa12.02□□□□□ -0.49
SHC1-211ENST00000490667 MANFP55145 182 aaKnown RBP12.02□□□□□ -0.49
SHC1-211ENST00000490667 MRPS22P82650 360 aaKnown RBP12.02□□□□□ -0.49
SHC1-211ENST00000490667 PSG6Q00889 435 aa12.02□□□□□ -0.49
SHC1-211ENST00000490667 HSPB3Q12988 150 aa12.02□□□□□ -0.49
SHC1-211ENST00000490667 GAB1Q13480 694 aa12.02□□□□□ -0.49
SHC1-211ENST00000490667 PDE7AQ13946 482 aa12.02□□□□□ -0.49
SHC1-211ENST00000490667 ZNHIT3Q15649 155 aaPredicted RBP12.02□□□□□ -0.49
SHC1-211ENST00000490667 CHI3L2Q15782 390 aa12.02□□□□□ -0.49
SHC1-211ENST00000490667 ATP6AP1LQ52LC2 224 aa12.02□□□□□ -0.49
SHC1-211ENST00000490667 C6orf136Q5SQH8 315 aa12.02□□□□□ -0.49
SHC1-211ENST00000490667 CES4AQ5XG92 561 aa12.02□□□□□ -0.49
SHC1-211ENST00000490667 RTL6Q6ICC9 239 aa12.02□□□□□ -0.49
SHC1-211ENST00000490667 B3GNT6Q6ZMB0 384 aa12.02□□□□□ -0.49
SHC1-211ENST00000490667 R3HCC1LQ7Z5L2 792 aaKnown RBP12.02□□□□□ -0.49
SHC1-211ENST00000490667 CCDC71Q8IV32 467 aaPredicted RBP12.02□□□□□ -0.49
SHC1-211ENST00000490667 WDSUB1Q8N9V3 476 aa12.02□□□□□ -0.49
SHC1-211ENST00000490667 OR10Q1Q8NGQ4 319 aa12.02□□□□□ -0.49
SHC1-211ENST00000490667 LILRB4Q8NHJ6 448 aa12.02□□□□□ -0.49
SHC1-211ENST00000490667 ZFP28Q8NHY6 868 aa12.02□□□□□ -0.49
SHC1-211ENST00000490667 EFHD2Q96C19 240 aaPredicted RBP12.02□□□□□ -0.49
SHC1-211ENST00000490667 TIMP4Q99727 224 aa12.02□□□□□ -0.49
SHC1-211ENST00000490667 TTYH2Q9BSA4 534 aa12.02□□□□□ -0.49
SHC1-211ENST00000490667 RUBCNLQ9H714 662 aa12.02□□□□□ -0.49
SHC1-211ENST00000490667 ZNF395Q9H8N7 513 aaPredicted RBP12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms