RNA–Protein interactions for RNA: ENST00000490516.5

EXOSC3-207, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 773 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-207ENST00000490516 GCM2O75603 506 aaPredicted RBP12.17□□□□□ -0.46
EXOSC3-207ENST00000490516 NTN1O95631 604 aa12.17□□□□□ -0.46
EXOSC3-207ENST00000490516 MBD3O95983 291 aa12.17□□□□□ -0.46
EXOSC3-207ENST00000490516 AHSGP02765 367 aa12.17□□□□□ -0.46
EXOSC3-207ENST00000490516 NCF1P14598 390 aaPredicted RBP12.17□□□□□ -0.46
EXOSC3-207ENST00000490516 EPB42P16452 691 aa12.17□□□□□ -0.46
EXOSC3-207ENST00000490516 GRK2P25098 689 aa12.17□□□□□ -0.46
EXOSC3-207ENST00000490516 BUD31P41223 144 aaPredicted RBP12.17□□□□□ -0.46
EXOSC3-207ENST00000490516 HNMTP50135 292 aa12.17□□□□□ -0.46
EXOSC3-207ENST00000490516 CDKL1Q00532 357 aa12.17□□□□□ -0.46
EXOSC3-207ENST00000490516 KIF5AQ12840 1032 aa12.17□□□□□ -0.46
EXOSC3-207ENST00000490516 SGCBQ16585 318 aa12.17□□□□□ -0.46
EXOSC3-207ENST00000490516 DEPDC1Q5TB30 811 aa12.17□□□□□ -0.46
EXOSC3-207ENST00000490516 GSTA5Q7RTV2 222 aa12.17□□□□□ -0.46
EXOSC3-207ENST00000490516 STK32CQ86UX6 486 aa12.17□□□□□ -0.46
EXOSC3-207ENST00000490516 CNGA4Q8IV77 575 aa12.17□□□□□ -0.46
EXOSC3-207ENST00000490516 RNF175Q8N4F7 328 aa12.17□□□□□ -0.46
EXOSC3-207ENST00000490516 METTL25Q8N6Q8 603 aa12.17□□□□□ -0.46
EXOSC3-207ENST00000490516 SNX31Q8N9S9 440 aa12.17□□□□□ -0.46
EXOSC3-207ENST00000490516 HSD17B8Q92506 261 aa12.17□□□□□ -0.46
EXOSC3-207ENST00000490516 CAPS2Q9BXY5 557 aa12.17□□□□□ -0.46
EXOSC3-207ENST00000490516 PRRG4Q9BZD6 226 aa12.17□□□□□ -0.46
EXOSC3-207ENST00000490516 BHLHE41Q9C0J9 482 aaPredicted RBP12.17□□□□□ -0.46
EXOSC3-207ENST00000490516 CBLN4Q9NTU7 201 aa12.17□□□□□ -0.46
EXOSC3-207ENST00000490516 FBXO34Q9NWN3 711 aa12.17□□□□□ -0.46
EXOSC3-207ENST00000490516 GPRC5BQ9NZH0 403 aa12.17□□□□□ -0.46
EXOSC3-207ENST00000490516 SNX8Q9Y5X2 465 aa12.17□□□□□ -0.46
EXOSC3-207ENST00000490516 IGHV4-61A0A0C4DH41 118 aa12.16□□□□□ -0.46
EXOSC3-207ENST00000490516 FAM157AC9JC47 383 aa12.16□□□□□ -0.46
EXOSC3-207ENST00000490516 GOLGA8MH3BSY2 632 aa12.16□□□□□ -0.46
EXOSC3-207ENST00000490516 RGS9O75916 674 aaPredicted RBP12.16□□□□□ -0.46
EXOSC3-207ENST00000490516 CSF3P09919 207 aa12.16□□□□□ -0.46
EXOSC3-207ENST00000490516 CCDC175P0C221 793 aa12.16□□□□□ -0.46
EXOSC3-207ENST00000490516 NR2F6P10588 404 aa12.16□□□□□ -0.46
EXOSC3-207ENST00000490516 PCNAP12004 261 aa12.16□□□□□ -0.46
EXOSC3-207ENST00000490516 HK1P19367 917 aa12.16□□□□□ -0.46
EXOSC3-207ENST00000490516 S1PR1P21453 382 aa12.16□□□□□ -0.46
EXOSC3-207ENST00000490516 IL32P24001 234 aa12.16□□□□□ -0.46
EXOSC3-207ENST00000490516 TTKP33981 857 aa12.16□□□□□ -0.46
EXOSC3-207ENST00000490516 DSCR4P56555 118 aaPredicted RBP12.16□□□□□ -0.46
EXOSC3-207ENST00000490516 SARNPP82979 210 aaKnown RBP12.16□□□□□ -0.46
EXOSC3-207ENST00000490516 TRIP13Q15645 432 aaPredicted RBP12.16□□□□□ -0.46
EXOSC3-207ENST00000490516 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.16□□□□□ -0.46
EXOSC3-207ENST00000490516 KHDRBS2Q5VWX1 349 aaKnown RBP12.16□□□□□ -0.46
EXOSC3-207ENST00000490516 ADCY4Q8NFM4 1077 aa12.16□□□□□ -0.46
EXOSC3-207ENST00000490516 OR4K17Q8NGC6 315 aa12.16□□□□□ -0.46
EXOSC3-207ENST00000490516 GFM2Q969S9 779 aaKnown RBP12.16□□□□□ -0.46
EXOSC3-207ENST00000490516 ESAMQ96AP7 390 aa12.16□□□□□ -0.46
EXOSC3-207ENST00000490516 NXNL1Q96CM4 212 aa12.16□□□□□ -0.46
EXOSC3-207ENST00000490516 TMCO6Q96DC7 493 aa12.16□□□□□ -0.46
EXOSC3-207ENST00000490516 DTNBP1Q96EV8 351 aa12.16□□□□□ -0.46
EXOSC3-207ENST00000490516 WDR34Q96EX3 536 aa12.16□□□□□ -0.46
EXOSC3-207ENST00000490516 PDLIM5Q96HC4 596 aaKnown RBP12.16□□□□□ -0.46
EXOSC3-207ENST00000490516 HBEGFQ99075 208 aa12.16□□□□□ -0.46
EXOSC3-207ENST00000490516 TMEM79Q9BSE2 394 aa12.16□□□□□ -0.46
EXOSC3-207ENST00000490516 EFCAB11Q9BUY7 163 aa12.16□□□□□ -0.46
EXOSC3-207ENST00000490516 SLC17A6Q9P2U8 582 aa12.16□□□□□ -0.46
EXOSC3-207ENST00000490516 XPR1Q9UBH6 696 aa12.16□□□□□ -0.46
EXOSC3-207ENST00000490516 TMEFF2Q9UIK5 374 aaPredicted RBP12.16□□□□□ -0.46
EXOSC3-207ENST00000490516 METRNQ9UJH8 293 aa12.16□□□□□ -0.46
EXOSC3-207ENST00000490516 OARD1Q9Y530 152 aa12.16□□□□□ -0.46
EXOSC3-207ENST00000490516 ASB4Q9Y574 426 aa12.16□□□□□ -0.46
EXOSC3-207ENST00000490516 A0A0A6YYJ9 748 aa12.15□□□□□ -0.46
EXOSC3-207ENST00000490516 ESYT3A0FGR9 886 aa12.15□□□□□ -0.46
EXOSC3-207ENST00000490516 OR2M5A3KFT3 312 aa12.15□□□□□ -0.46
EXOSC3-207ENST00000490516 E7EQL1 145 aa12.15□□□□□ -0.46
EXOSC3-207ENST00000490516 SLCO1B7G3V0H7 640 aa12.15□□□□□ -0.46
EXOSC3-207ENST00000490516 H7C417 338 aa12.15□□□□□ -0.46
EXOSC3-207ENST00000490516 ABCD4O14678 606 aa12.15□□□□□ -0.46
EXOSC3-207ENST00000490516 PGRMC2O15173 223 aa12.15□□□□□ -0.46
EXOSC3-207ENST00000490516 TAPBPO15533 448 aa12.15□□□□□ -0.46
EXOSC3-207ENST00000490516 CASP2P42575 452 aa12.15□□□□□ -0.46
EXOSC3-207ENST00000490516 NR4A2P43354 598 aa12.15□□□□□ -0.46
EXOSC3-207ENST00000490516 KCNJ1P48048 391 aa12.15□□□□□ -0.46
EXOSC3-207ENST00000490516 VPS41P49754 854 aa12.15□□□□□ -0.46
EXOSC3-207ENST00000490516 EFNA4P52798 201 aa12.15□□□□□ -0.46
EXOSC3-207ENST00000490516 GAS1P54826 345 aa12.15□□□□□ -0.46
EXOSC3-207ENST00000490516 RPS3AP61247 264 aaKnown RBP12.15□□□□□ -0.46
EXOSC3-207ENST00000490516 EXOSC7Q15024 291 aaKnown RBP12.15□□□□□ -0.46
EXOSC3-207ENST00000490516 SFRP5Q5T4F7 317 aa12.15□□□□□ -0.46
EXOSC3-207ENST00000490516 SEL1L2Q5TEA6 688 aa12.15□□□□□ -0.46
EXOSC3-207ENST00000490516 MFSD12Q6NUT3 480 aa12.15□□□□□ -0.46
EXOSC3-207ENST00000490516 GABRG1Q8N1C3 465 aa12.15□□□□□ -0.46
EXOSC3-207ENST00000490516 OR7G1Q8NGA0 311 aa12.15□□□□□ -0.46
EXOSC3-207ENST00000490516 TMBIM1Q969X1 311 aa12.15□□□□□ -0.46
EXOSC3-207ENST00000490516 HES6Q96HZ4 224 aa12.15□□□□□ -0.46
EXOSC3-207ENST00000490516 COL21A1Q96P44 957 aa12.15□□□□□ -0.46
EXOSC3-207ENST00000490516 HDHD5Q9BXW7 423 aa12.15□□□□□ -0.46
EXOSC3-207ENST00000490516 DSN1Q9H410 356 aa12.15□□□□□ -0.46
EXOSC3-207ENST00000490516 ARMCX1Q9P291 453 aa12.15□□□□□ -0.46
EXOSC3-207ENST00000490516 ARFGEF3Q5TH69 2177 aa12.14□□□□□ -0.47
EXOSC3-207ENST00000490516 PLPP1O14494 284 aa12.14□□□□□ -0.47
EXOSC3-207ENST00000490516 ACOX3O15254 700 aa12.14□□□□□ -0.47
EXOSC3-207ENST00000490516 TMPRSS11DO60235 418 aa12.14□□□□□ -0.47
EXOSC3-207ENST00000490516 EEDO75530 441 aaKnown RBP12.14□□□□□ -0.47
EXOSC3-207ENST00000490516 REM1O75628 298 aa12.14□□□□□ -0.47
EXOSC3-207ENST00000490516 NT5EP21589 574 aa12.14□□□□□ -0.47
EXOSC3-207ENST00000490516 EIF1AXP47813 144 aaKnown RBP12.14□□□□□ -0.47
EXOSC3-207ENST00000490516 RAP1GDS1P52306 607 aa12.14□□□□□ -0.47
EXOSC3-207ENST00000490516 CHIT1Q13231 466 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms