RNA–Protein interactions for RNA: ENST00000489907.2

SMG5-205, Transcript of SMG5, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG5, Length 535 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG5-205ENST00000489907 GAL3ST4Q96RP7 486 aa7.41□□□□□ -1.22
SMG5-205ENST00000489907 TRIB1Q96RU8 372 aa7.41□□□□□ -1.22
SMG5-205ENST00000489907 NODALQ96S42 347 aa7.41□□□□□ -1.22
SMG5-205ENST00000489907 MTERF1Q99551 399 aaKnown RBP7.41□□□□□ -1.22
SMG5-205ENST00000489907 TUBA1CQ9BQE3 449 aa7.41□□□□□ -1.22
SMG5-205ENST00000489907 PELOQ9BRX2 385 aaKnown RBP7.41□□□□□ -1.22
SMG5-205ENST00000489907 NXF5Q9H1B4 397 aaKnown RBP7.41□□□□□ -1.22
SMG5-205ENST00000489907 OR10A5Q9H207 317 aa7.41□□□□□ -1.22
SMG5-205ENST00000489907 GSTO2Q9H4Y5 243 aa7.41□□□□□ -1.22
SMG5-205ENST00000489907 SDAD1Q9NVU7 687 aaKnown RBP eCLIP7.41□□□□□ -1.22
SMG5-205ENST00000489907 BEX4Q9NWD9 120 aaPredicted RBP7.41□□□□□ -1.22
SMG5-205ENST00000489907 TEX10Q9NXF1 929 aaPredicted RBP7.41□□□□□ -1.22
SMG5-205ENST00000489907 NUDT4Q9NZJ9 180 aa7.41□□□□□ -1.22
SMG5-205ENST00000489907 ADGRE2Q9UHX3 823 aa7.41□□□□□ -1.22
SMG5-205ENST00000489907 PHF11Q9UIL8 331 aa7.41□□□□□ -1.22
SMG5-205ENST00000489907 HAO1Q9UJM8 370 aa7.41□□□□□ -1.22
SMG5-205ENST00000489907 TMCO1Q9UM00 188 aa7.41□□□□□ -1.22
SMG5-205ENST00000489907 CAMK2AQ9UQM7 478 aa7.41□□□□□ -1.22
SMG5-205ENST00000489907 FBN1P35555 2871 aaKnown RBP7.41□□□□□ -1.22
SMG5-205ENST00000489907 ANK3Q12955 4377 aaKnown RBP7.4□□□□□ -1.22
SMG5-205ENST00000489907 FBN3Q75N90 2809 aa7.4□□□□□ -1.22
SMG5-205ENST00000489907 SYCE1LA8MT33 242 aa7.4□□□□□ -1.22
SMG5-205ENST00000489907 DEFB108AA8MXU0 73 aa7.4□□□□□ -1.22
SMG5-205ENST00000489907 FOXE1O00358 373 aaPredicted RBP7.4□□□□□ -1.22
SMG5-205ENST00000489907 UBFD1O14562 309 aaKnown RBP7.4□□□□□ -1.22
SMG5-205ENST00000489907 TP53I11O14683 189 aa7.4□□□□□ -1.22
SMG5-205ENST00000489907 GNB5O14775 395 aa7.4□□□□□ -1.22
SMG5-205ENST00000489907 ICOSLGO75144 302 aa7.4□□□□□ -1.22
SMG5-205ENST00000489907 SIX3O95343 332 aaPredicted RBP7.4□□□□□ -1.22
SMG5-205ENST00000489907 ACTL6AO96019 429 aa7.4□□□□□ -1.22
SMG5-205ENST00000489907 GBAP04062 536 aa7.4□□□□□ -1.22
SMG5-205ENST00000489907 TMIGD3P0DMS9 266 aaPredicted RBP7.4□□□□□ -1.22
SMG5-205ENST00000489907 NAGAP17050 411 aa7.4□□□□□ -1.22
SMG5-205ENST00000489907 GPX3P22352 226 aa7.4□□□□□ -1.22
SMG5-205ENST00000489907 LOXP28300 417 aaPredicted RBP7.4□□□□□ -1.22
SMG5-205ENST00000489907 TLX1P31314 330 aaPredicted RBP7.4□□□□□ -1.22
SMG5-205ENST00000489907 MDH1P40925 334 aaKnown RBP7.4□□□□□ -1.22
SMG5-205ENST00000489907 BUD31P41223 144 aaPredicted RBP7.4□□□□□ -1.22
SMG5-205ENST00000489907 PCYT1AP49585 367 aa7.4□□□□□ -1.22
SMG5-205ENST00000489907 NEK2P51955 445 aa7.4□□□□□ -1.22
SMG5-205ENST00000489907 DUSP2Q05923 314 aa7.4□□□□□ -1.22
SMG5-205ENST00000489907 GALNT1Q10472 559 aaPredicted RBP7.4□□□□□ -1.22
SMG5-205ENST00000489907 DDX39BQ13838 428 aaKnown RBP7.4□□□□□ -1.22
SMG5-205ENST00000489907 POU4F3Q15319 338 aa7.4□□□□□ -1.22
SMG5-205ENST00000489907 PFKFB4Q16877 469 aa7.4□□□□□ -1.22
SMG5-205ENST00000489907 PRICKLE4Q2TBC4 344 aa7.4□□□□□ -1.22
SMG5-205ENST00000489907 HSP90B2PQ58FF3 399 aa7.4□□□□□ -1.22
SMG5-205ENST00000489907 SHEQ5VZ18 495 aa7.4□□□□□ -1.22
SMG5-205ENST00000489907 LIPJQ5W064 366 aa7.4□□□□□ -1.22
SMG5-205ENST00000489907 KLC3Q6P597 504 aa7.4□□□□□ -1.22
SMG5-205ENST00000489907 CLEC9AQ6UXN8 241 aa7.4□□□□□ -1.22
SMG5-205ENST00000489907 C22orf34Q6ZV56 151 aa7.4□□□□□ -1.22
SMG5-205ENST00000489907 RPS27LQ71UM5 84 aaKnown RBP7.4□□□□□ -1.22
SMG5-205ENST00000489907 YRDCQ86U90 279 aaKnown RBP7.4□□□□□ -1.22
SMG5-205ENST00000489907 PACS2Q86VP3 889 aa7.4□□□□□ -1.22
SMG5-205ENST00000489907 PRR22Q8IZ63 422 aa7.4□□□□□ -1.22
SMG5-205ENST00000489907 TAGAPQ8N103 731 aa7.4□□□□□ -1.22
SMG5-205ENST00000489907 LRRC75A-AS1Q8N1F1 130 aa7.4□□□□□ -1.22
SMG5-205ENST00000489907 TEX9Q8N6V9 391 aa7.4□□□□□ -1.22
SMG5-205ENST00000489907 GOLGA6L1Q8N7Z2 621 aa7.4□□□□□ -1.22
SMG5-205ENST00000489907 PTGR2Q8N8N7 351 aaPredicted RBP7.4□□□□□ -1.22
SMG5-205ENST00000489907 ANKRD42Q8N9B4 389 aa7.4□□□□□ -1.22
SMG5-205ENST00000489907 C17orf47Q8NEP4 570 aa7.4□□□□□ -1.22
SMG5-205ENST00000489907 ZNF483Q8TF39 744 aaPredicted RBP7.4□□□□□ -1.22
SMG5-205ENST00000489907 RNF138Q8WVD3 245 aa7.4□□□□□ -1.22
SMG5-205ENST00000489907 ZNF75CPQ92670 426 aaPredicted RBP7.4□□□□□ -1.22
SMG5-205ENST00000489907 ABTB1Q969K4 478 aaPredicted RBP7.4□□□□□ -1.22
SMG5-205ENST00000489907 COX4I2Q96KJ9 171 aa7.4□□□□□ -1.22
SMG5-205ENST00000489907 ZNF317Q96PQ6 595 aaPredicted RBP7.4□□□□□ -1.22
SMG5-205ENST00000489907 TMEM237Q96Q45 408 aa7.4□□□□□ -1.22
SMG5-205ENST00000489907 SORT1Q99523 831 aa7.4□□□□□ -1.22
SMG5-205ENST00000489907 ZNF395Q9H8N7 513 aaPredicted RBP7.4□□□□□ -1.22
SMG5-205ENST00000489907 NEUROD4Q9HD90 331 aa7.4□□□□□ -1.22
SMG5-205ENST00000489907 TNFRSF12AQ9NP84 129 aa7.4□□□□□ -1.22
SMG5-205ENST00000489907 GALNT8Q9NY28 637 aa7.4□□□□□ -1.22
SMG5-205ENST00000489907 CLCF1Q9UBD9 225 aa7.4□□□□□ -1.22
SMG5-205ENST00000489907 OPTCQ9UBM4 332 aa7.4□□□□□ -1.22
SMG5-205ENST00000489907 PCTPQ9UKL6 214 aa7.4□□□□□ -1.22
SMG5-205ENST00000489907 RNF112Q9ULX5 631 aa7.4□□□□□ -1.22
SMG5-205ENST00000489907 EXO1Q9UQ84 846 aaKnown RBP7.4□□□□□ -1.22
SMG5-205ENST00000489907 RNF11Q9Y3C5 154 aa7.4□□□□□ -1.22
SMG5-205ENST00000489907 PCDHGA11Q9Y5H2 935 aa7.4□□□□□ -1.22
SMG5-205ENST00000489907 ZANQ9Y493 2812 aa7.39□□□□□ -1.23
SMG5-205ENST00000489907 DSCAMO60469 2012 aa7.39□□□□□ -1.23
SMG5-205ENST00000489907 SH3D21A4FU49 640 aa7.39□□□□□ -1.23
SMG5-205ENST00000489907 CAPN14A8MX76 684 aa7.39□□□□□ -1.23
SMG5-205ENST00000489907 OR7A17O14581 309 aa7.39□□□□□ -1.23
SMG5-205ENST00000489907 ZNF195O14628 629 aa7.39□□□□□ -1.23
SMG5-205ENST00000489907 SNPHO15079 494 aa7.39□□□□□ -1.23
SMG5-205ENST00000489907 HCRTR2O43614 444 aa7.39□□□□□ -1.23
SMG5-205ENST00000489907 ITM2AO43736 263 aa7.39□□□□□ -1.23
SMG5-205ENST00000489907 DYRK3O43781 588 aa7.39□□□□□ -1.23
SMG5-205ENST00000489907 OR10H2O60403 315 aa7.39□□□□□ -1.23
SMG5-205ENST00000489907 NPHS1O60500 1241 aa7.39□□□□□ -1.23
SMG5-205ENST00000489907 UGDHO60701 494 aa7.39□□□□□ -1.23
SMG5-205ENST00000489907 UGT2B11O75310 529 aa7.39□□□□□ -1.23
SMG5-205ENST00000489907 PPM1BO75688 479 aa7.39□□□□□ -1.23
SMG5-205ENST00000489907 FGF4P08620 206 aa7.39□□□□□ -1.23
SMG5-205ENST00000489907 NR2F6P10588 404 aa7.39□□□□□ -1.23
SMG5-205ENST00000489907 MYL2P10916 166 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms