RNA–Protein interactions for RNA: ENST00000489430.1

MRPL55-230, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 5

Gene MRPL55, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-230ENST00000489430 TMBIM1Q969X1 311 aa17.39■□□□□ 0.37
MRPL55-230ENST00000489430 ELP4Q96EB1 424 aa17.39■□□□□ 0.37
MRPL55-230ENST00000489430 ZBED6CLQ96FA7 236 aaPredicted RBP17.39■□□□□ 0.37
MRPL55-230ENST00000489430 ZIM3Q96PE6 472 aa17.39■□□□□ 0.37
MRPL55-230ENST00000489430 EXO5Q9H790 373 aa17.39■□□□□ 0.37
MRPL55-230ENST00000489430 PNPLA3Q9NST1 481 aa17.39■□□□□ 0.37
MRPL55-230ENST00000489430 ACSS1Q9NUB1 689 aaPredicted RBP17.39■□□□□ 0.37
MRPL55-230ENST00000489430 DDX18Q9NVP1 670 aaKnown RBP17.39■□□□□ 0.37
MRPL55-230ENST00000489430 NOTCH2Q04721 2471 aa17.39■□□□□ 0.37
MRPL55-230ENST00000489430 UPK1AO00322 258 aa17.38■□□□□ 0.37
MRPL55-230ENST00000489430 TSPAN2O60636 221 aa17.38■□□□□ 0.37
MRPL55-230ENST00000489430 ICOSLGO75144 302 aa17.38■□□□□ 0.37
MRPL55-230ENST00000489430 REM1O75628 298 aa17.38■□□□□ 0.37
MRPL55-230ENST00000489430 ENDOUP21128 410 aaKnown RBP17.38■□□□□ 0.37
MRPL55-230ENST00000489430 CHRNB4P30926 498 aa17.38■□□□□ 0.37
MRPL55-230ENST00000489430 MC3RP41968 323 aa17.38■□□□□ 0.37
MRPL55-230ENST00000489430 FRKP42685 505 aaPredicted RBP17.38■□□□□ 0.37
MRPL55-230ENST00000489430 PRSS53Q2L4Q9 553 aa17.38■□□□□ 0.37
MRPL55-230ENST00000489430 NHSL2Q5HYW2 709 aa17.38■□□□□ 0.37
MRPL55-230ENST00000489430 BICRALQ6AI39 1079 aa17.38■□□□□ 0.37
MRPL55-230ENST00000489430 B3GNT6Q6ZMB0 384 aa17.38■□□□□ 0.37
MRPL55-230ENST00000489430 ZCCHC23Q6ZST2 131 aa17.38■□□□□ 0.37
MRPL55-230ENST00000489430 MARVELD2Q8N4S9 558 aa17.38■□□□□ 0.37
MRPL55-230ENST00000489430 NATD1Q8N6N6 113 aa17.38■□□□□ 0.37
MRPL55-230ENST00000489430 OR1J4Q8NGS1 313 aa17.38■□□□□ 0.37
MRPL55-230ENST00000489430 CA5BP1Q8WTZ4 195 aa17.38■□□□□ 0.37
MRPL55-230ENST00000489430 RNF138Q8WVD3 245 aa17.38■□□□□ 0.37
MRPL55-230ENST00000489430 PPCDCQ96CD2 204 aa17.38■□□□□ 0.37
MRPL55-230ENST00000489430 GNRHR2Q96P88 292 aa17.38■□□□□ 0.37
MRPL55-230ENST00000489430 NODALQ96S42 347 aa17.38■□□□□ 0.37
MRPL55-230ENST00000489430 OSBPL11Q9BXB4 747 aa17.38■□□□□ 0.37
MRPL55-230ENST00000489430 ANKRA2Q9H9E1 313 aa17.38■□□□□ 0.37
MRPL55-230ENST00000489430 MRTO4Q9UKD2 239 aaKnown RBP17.38■□□□□ 0.37
MRPL55-230ENST00000489430 GTF3C1Q12789 2109 aa17.38■□□□□ 0.37
MRPL55-230ENST00000489430 CENPEQ02224 2701 aa17.37■□□□□ 0.37
MRPL55-230ENST00000489430 NCOA6Q14686 2063 aaPredicted RBP17.37■□□□□ 0.37
MRPL55-230ENST00000489430 PRAMEF25A6NGN4 478 aa17.37■□□□□ 0.37
MRPL55-230ENST00000489430 TMEM233B4DJY2 109 aa17.37■□□□□ 0.37
MRPL55-230ENST00000489430 SNPHO15079 494 aa17.37■□□□□ 0.37
MRPL55-230ENST00000489430 PDPK1O15530 556 aa17.37■□□□□ 0.37
MRPL55-230ENST00000489430 LYPLA1O75608 230 aaPredicted RBP17.37■□□□□ 0.37
MRPL55-230ENST00000489430 CBR3O75828 277 aa17.37■□□□□ 0.37
MRPL55-230ENST00000489430 ZWINTO95229 277 aa17.37■□□□□ 0.37
MRPL55-230ENST00000489430 LRATO95237 230 aa17.37■□□□□ 0.37
MRPL55-230ENST00000489430 SERPINE1P05121 402 aa17.37■□□□□ 0.37
MRPL55-230ENST00000489430 MYZAPP0CAP1 466 aa17.37■□□□□ 0.37
MRPL55-230ENST00000489430 DHRS4L1P0CG22 281 aa17.37■□□□□ 0.37
MRPL55-230ENST00000489430 BCKDHAP12694 445 aa17.37■□□□□ 0.37
MRPL55-230ENST00000489430 GRK2P25098 689 aa17.37■□□□□ 0.37
MRPL55-230ENST00000489430 PTPN6P29350 595 aa17.37■□□□□ 0.37
MRPL55-230ENST00000489430 IL12BP29460 328 aa17.37■□□□□ 0.37
MRPL55-230ENST00000489430 CORO7P57737 925 aa17.37■□□□□ 0.37
MRPL55-230ENST00000489430 PSG6Q00889 435 aa17.37■□□□□ 0.37
MRPL55-230ENST00000489430 SF3B4Q15427 424 aaKnown RBP eCLIP17.37■□□□□ 0.37
MRPL55-230ENST00000489430 ZNHIT3Q15649 155 aaPredicted RBP17.37■□□□□ 0.37
MRPL55-230ENST00000489430 ATP6AP1LQ52LC2 224 aa17.37■□□□□ 0.37
MRPL55-230ENST00000489430 CEP85LQ5SZL2 805 aa17.37■□□□□ 0.37
MRPL55-230ENST00000489430 TMEM107Q6UX40 140 aa17.37■□□□□ 0.37
MRPL55-230ENST00000489430 NPSR1Q6W5P4 371 aa17.37■□□□□ 0.37
MRPL55-230ENST00000489430 PM20D2Q8IYS1 436 aa17.37■□□□□ 0.37
MRPL55-230ENST00000489430 LILRB4Q8NHJ6 448 aa17.37■□□□□ 0.37
MRPL55-230ENST00000489430 PPP1R14CQ8TAE6 165 aa17.37■□□□□ 0.37
MRPL55-230ENST00000489430 SDCCAG3Q96C92 435 aa17.37■□□□□ 0.37
MRPL55-230ENST00000489430 TSSK3Q96PN8 268 aa17.37■□□□□ 0.37
MRPL55-230ENST00000489430 ADOQ96SZ5 270 aa17.37■□□□□ 0.37
MRPL55-230ENST00000489430 KLRF1Q9NZS2 232 aa17.37■□□□□ 0.37
MRPL55-230ENST00000489430 NTMQ9P121 344 aa17.37■□□□□ 0.37
MRPL55-230ENST00000489430 SPRR3Q9UBC9 169 aa17.37■□□□□ 0.37
MRPL55-230ENST00000489430 ZDHHC2Q9UIJ5 367 aa17.37■□□□□ 0.37
MRPL55-230ENST00000489430 EPB41L3Q9Y2J2 1087 aaPredicted RBP17.37■□□□□ 0.37
MRPL55-230ENST00000489430 OR10H1Q9Y4A9 318 aa17.37■□□□□ 0.37
MRPL55-230ENST00000489430 CELSR2Q9HCU4 2923 aa17.37■□□□□ 0.37
MRPL55-230ENST00000489430 AHRRA9YTQ3 701 aa17.36■□□□□ 0.37
MRPL55-230ENST00000489430 TRAPPC6AO75865 159 aa17.36■□□□□ 0.37
MRPL55-230ENST00000489430 PRPS2P11908 318 aa17.36■□□□□ 0.37
MRPL55-230ENST00000489430 ARRB2P32121 409 aa17.36■□□□□ 0.37
MRPL55-230ENST00000489430 PTGDSP41222 190 aa17.36■□□□□ 0.37
MRPL55-230ENST00000489430 PSMD4P55036 377 aaKnown RBP17.36■□□□□ 0.37
MRPL55-230ENST00000489430 ZNF155Q12901 538 aaPredicted RBP17.36■□□□□ 0.37
MRPL55-230ENST00000489430 MLC1Q15049 377 aa17.36■□□□□ 0.37
MRPL55-230ENST00000489430 SMU1Q2TAY7 513 aa17.36■□□□□ 0.37
MRPL55-230ENST00000489430 GALNTL6Q49A17 601 aa17.36■□□□□ 0.37
MRPL55-230ENST00000489430 ZNF585AQ6P3V2 769 aa17.36■□□□□ 0.37
MRPL55-230ENST00000489430 ANGPTL8Q6UXH0 198 aa17.36■□□□□ 0.37
MRPL55-230ENST00000489430 LARP4Q71RC2 724 aaKnown RBP eCLIP17.36■□□□□ 0.37
MRPL55-230ENST00000489430 SLC44A2Q8IWA5 706 aaPredicted RBP17.36■□□□□ 0.37
MRPL55-230ENST00000489430 OR5M9Q8NGP3 310 aa17.36■□□□□ 0.37
MRPL55-230ENST00000489430 CEP70Q8NHQ1 597 aa17.36■□□□□ 0.37
MRPL55-230ENST00000489430 HOXB13Q92826 284 aaPredicted RBP17.36■□□□□ 0.37
MRPL55-230ENST00000489430 MARVELD3Q96A59 401 aa17.36■□□□□ 0.37
MRPL55-230ENST00000489430 TTYH2Q9BSA4 534 aa17.36■□□□□ 0.37
MRPL55-230ENST00000489430 LMF2Q9BU23 707 aaKnown RBP17.36■□□□□ 0.37
MRPL55-230ENST00000489430 SLC6A15Q9H2J7 730 aa17.36■□□□□ 0.37
MRPL55-230ENST00000489430 C3orf14Q9HBI5 128 aa17.36■□□□□ 0.37
MRPL55-230ENST00000489430 Q9N2J8 555 aa17.36■□□□□ 0.37
MRPL55-230ENST00000489430 ERLIN1O75477 346 aa17.35■□□□□ 0.37
MRPL55-230ENST00000489430 GRNP28799 593 aaKnown RBP17.35■□□□□ 0.37
MRPL55-230ENST00000489430 GCKP35557 465 aa17.35■□□□□ 0.37
MRPL55-230ENST00000489430 HPCAL1P37235 193 aa17.35■□□□□ 0.37
MRPL55-230ENST00000489430 MANFP55145 182 aaKnown RBP17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms