RNA–Protein interactions for RNA: ENST00000489049.5

PDCD4-209, Transcript of programmed cell death 4, humanhuman

TSL 2

Gene PDCD4, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4-209ENST00000489049 CXorf36Q9H7Y0 433 aa6.23□□□□□ -1.41
PDCD4-209ENST00000489049 POLE3Q9NRF9 147 aa6.23□□□□□ -1.41
PDCD4-209ENST00000489049 KRT84Q9NSB2 600 aa6.23□□□□□ -1.41
PDCD4-209ENST00000489049 PLCXD1Q9NUJ7 323 aa6.23□□□□□ -1.41
PDCD4-209ENST00000489049 GIN1Q9NXP7 522 aa6.23□□□□□ -1.41
PDCD4-209ENST00000489049 PDP1Q9P0J1 537 aaPredicted RBP6.23□□□□□ -1.41
PDCD4-209ENST00000489049 CPNE7Q9UBL6 633 aa6.23□□□□□ -1.41
PDCD4-209ENST00000489049 WNT16Q9UBV4 365 aa6.23□□□□□ -1.41
PDCD4-209ENST00000489049 RSL24D1Q9UHA3 163 aaKnown RBP6.23□□□□□ -1.41
PDCD4-209ENST00000489049 KCND3Q9UK17 655 aa6.23□□□□□ -1.41
PDCD4-209ENST00000489049 CES1P1Q9UKY3 287 aa6.23□□□□□ -1.41
PDCD4-209ENST00000489049 NDRG4Q9ULP0 352 aaKnown RBP6.23□□□□□ -1.41
PDCD4-209ENST00000489049 TMCC3Q9ULS5 477 aa6.23□□□□□ -1.41
PDCD4-209ENST00000489049 MGAT4BQ9UQ53 548 aa6.23□□□□□ -1.41
PDCD4-209ENST00000489049 SLC9A8Q9Y2E8 581 aa6.23□□□□□ -1.41
PDCD4-209ENST00000489049 IFT52Q9Y366 437 aa6.23□□□□□ -1.41
PDCD4-209ENST00000489049 SNX5Q9Y5X3 404 aa6.23□□□□□ -1.41
PDCD4-209ENST00000489049 A0A087WV62 115 aa6.22□□□□□ -1.41
PDCD4-209ENST00000489049 A0A0J9YY10 115 aa6.22□□□□□ -1.41
PDCD4-209ENST00000489049 A0A1W2PR48 441 aa6.22□□□□□ -1.41
PDCD4-209ENST00000489049 FEZF1A0PJY2 475 aa6.22□□□□□ -1.41
PDCD4-209ENST00000489049 SH3D21A4FU49 640 aa6.22□□□□□ -1.41
PDCD4-209ENST00000489049 LILRA5A6NI73 299 aa6.22□□□□□ -1.41
PDCD4-209ENST00000489049 FAAHO00519 579 aa6.22□□□□□ -1.41
PDCD4-209ENST00000489049 SUSD5O60279 629 aa6.22□□□□□ -1.41
PDCD4-209ENST00000489049 SH3BGRLO75368 114 aa6.22□□□□□ -1.41
PDCD4-209ENST00000489049 GCM2O75603 506 aaPredicted RBP6.22□□□□□ -1.41
PDCD4-209ENST00000489049 CCNB2O95067 398 aa6.22□□□□□ -1.41
PDCD4-209ENST00000489049 MFN2O95140 757 aa6.22□□□□□ -1.41
PDCD4-209ENST00000489049 ADAP00813 363 aa6.22□□□□□ -1.41
PDCD4-209ENST00000489049 MT-ND1P03886 318 aa6.22□□□□□ -1.41
PDCD4-209ENST00000489049 GBAP04062 536 aa6.22□□□□□ -1.41
PDCD4-209ENST00000489049 IGHV4-34P06331 123 aa6.22□□□□□ -1.41
PDCD4-209ENST00000489049 MSL3P1P0C860 447 aa6.22□□□□□ -1.41
PDCD4-209ENST00000489049 NR2F1P10589 423 aa6.22□□□□□ -1.41
PDCD4-209ENST00000489049 CHRNB1P11230 501 aa6.22□□□□□ -1.41
PDCD4-209ENST00000489049 UGT2B7P16662 529 aa6.22□□□□□ -1.41
PDCD4-209ENST00000489049 ITIH1P19827 911 aa6.22□□□□□ -1.41
PDCD4-209ENST00000489049 GSTM3P21266 225 aa6.22□□□□□ -1.41
PDCD4-209ENST00000489049 MATN1P21941 496 aa6.22□□□□□ -1.41
PDCD4-209ENST00000489049 EEF1B2P24534 225 aaKnown RBP6.22□□□□□ -1.41
PDCD4-209ENST00000489049 CALRP27797 417 aaKnown RBP6.22□□□□□ -1.41
PDCD4-209ENST00000489049 PSMB5P28074 263 aa6.22□□□□□ -1.41
PDCD4-209ENST00000489049 PEBP1P30086 187 aaKnown RBP6.22□□□□□ -1.41
PDCD4-209ENST00000489049 KCNJ5P48544 419 aa6.22□□□□□ -1.41
PDCD4-209ENST00000489049 NCBP2P52298 156 aaKnown RBP eCLIP6.22□□□□□ -1.41
PDCD4-209ENST00000489049 CLDN2P57739 230 aa6.22□□□□□ -1.41
PDCD4-209ENST00000489049 CYP4F2P78329 520 aa6.22□□□□□ -1.41
PDCD4-209ENST00000489049 VLDLRP98155 873 aa6.22□□□□□ -1.41
PDCD4-209ENST00000489049 NPRL3Q12980 569 aa6.22□□□□□ -1.41
PDCD4-209ENST00000489049 LSAMPQ13449 338 aa6.22□□□□□ -1.41
PDCD4-209ENST00000489049 LEXMQ3ZCV2 418 aa6.22□□□□□ -1.41
PDCD4-209ENST00000489049 GARNL3Q5VVW2 1013 aa6.22□□□□□ -1.41
PDCD4-209ENST00000489049 FOXB2Q5VYV0 432 aa6.22□□□□□ -1.41
PDCD4-209ENST00000489049 FBXO42Q6P3S6 717 aa6.22□□□□□ -1.41
PDCD4-209ENST00000489049 CD300LDQ6UXZ3 194 aa6.22□□□□□ -1.41
PDCD4-209ENST00000489049 USP53Q70EK8 1073 aa6.22□□□□□ -1.41
PDCD4-209ENST00000489049 RNF44Q7L0R7 432 aa6.22□□□□□ -1.41
PDCD4-209ENST00000489049 GKN2Q86XP6 184 aa6.22□□□□□ -1.41
PDCD4-209ENST00000489049 LRRC25Q8N386 305 aaPredicted RBP6.22□□□□□ -1.41
PDCD4-209ENST00000489049 CHDHQ8NE62 594 aaPredicted RBP6.22□□□□□ -1.41
PDCD4-209ENST00000489049 OR4K14Q8NGD5 310 aa6.22□□□□□ -1.41
PDCD4-209ENST00000489049 OR4C15Q8NGM1 316 aa6.22□□□□□ -1.41
PDCD4-209ENST00000489049 FLVCR1-AS1Q8TAF5 88 aa6.22□□□□□ -1.41
PDCD4-209ENST00000489049 FAM110BQ8TC76 370 aa6.22□□□□□ -1.41
PDCD4-209ENST00000489049 PHF10Q8WUB8 498 aaKnown RBP6.22□□□□□ -1.41
PDCD4-209ENST00000489049 KLHL6Q8WZ60 621 aa6.22□□□□□ -1.41
PDCD4-209ENST00000489049 TSACCQ96A04 125 aaPredicted RBP6.22□□□□□ -1.41
PDCD4-209ENST00000489049 EXOSC8Q96B26 276 aaKnown RBP6.22□□□□□ -1.41
PDCD4-209ENST00000489049 TOE1Q96GM8 510 aaKnown RBP6.22□□□□□ -1.41
PDCD4-209ENST00000489049 FBXL20Q96IG2 436 aa6.22□□□□□ -1.41
PDCD4-209ENST00000489049 ZNF354BQ96LW1 612 aa6.22□□□□□ -1.41
PDCD4-209ENST00000489049 ZNF578Q96N58 590 aaPredicted RBP6.22□□□□□ -1.41
PDCD4-209ENST00000489049 OR2A5Q96R48 311 aa6.22□□□□□ -1.41
PDCD4-209ENST00000489049 NODALQ96S42 347 aa6.22□□□□□ -1.41
PDCD4-209ENST00000489049 CD180Q99467 661 aa6.22□□□□□ -1.41
PDCD4-209ENST00000489049 DOK1Q99704 481 aa6.22□□□□□ -1.41
PDCD4-209ENST00000489049 ZFYVE21Q9BQ24 234 aa6.22□□□□□ -1.41
PDCD4-209ENST00000489049 PINK1Q9BXM7 581 aa6.22□□□□□ -1.41
PDCD4-209ENST00000489049 ACTRT3Q9BYD9 372 aa6.22□□□□□ -1.41
PDCD4-209ENST00000489049 AMBRA1Q9C0C7 1298 aa6.22□□□□□ -1.41
PDCD4-209ENST00000489049 TMEM168Q9H0V1 697 aa6.22□□□□□ -1.41
PDCD4-209ENST00000489049 GLIPR2Q9H4G4 154 aa6.22□□□□□ -1.41
PDCD4-209ENST00000489049 DUSP21Q9H596 190 aa6.22□□□□□ -1.41
PDCD4-209ENST00000489049 ARMC7Q9H6L4 198 aa6.22□□□□□ -1.41
PDCD4-209ENST00000489049 MTHFD2LQ9H903 347 aaPredicted RBP6.22□□□□□ -1.41
PDCD4-209ENST00000489049 CXorf21Q9HAI6 301 aa6.22□□□□□ -1.41
PDCD4-209ENST00000489049 SMURF2Q9HAU4 748 aa6.22□□□□□ -1.41
PDCD4-209ENST00000489049 FZD3Q9NPG1 666 aa6.22□□□□□ -1.41
PDCD4-209ENST00000489049 SIRT3Q9NTG7 399 aaPredicted RBP6.22□□□□□ -1.41
PDCD4-209ENST00000489049 ZCCHC3Q9NUD5 404 aaKnown RBP6.22□□□□□ -1.41
PDCD4-209ENST00000489049 KLHL28Q9NXS3 571 aa6.22□□□□□ -1.41
PDCD4-209ENST00000489049 SPHK1Q9NYA1 384 aa6.22□□□□□ -1.41
PDCD4-209ENST00000489049 EPHA6Q9UF33 1036 aa6.22□□□□□ -1.41
PDCD4-209ENST00000489049 PILRAQ9UKJ1 303 aa6.22□□□□□ -1.41
PDCD4-209ENST00000489049 RAB23Q9ULC3 237 aa6.22□□□□□ -1.41
PDCD4-209ENST00000489049 DUSP12Q9UNI6 340 aa6.22□□□□□ -1.41
PDCD4-209ENST00000489049 ABCG2Q9UNQ0 655 aa6.22□□□□□ -1.41
PDCD4-209ENST00000489049 NAALAD2Q9Y3Q0 740 aa6.22□□□□□ -1.41
PDCD4-209ENST00000489049 PLEKHM1Q9Y4G2 1056 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms