RNA–Protein interactions for RNA: ENST00000489028.1

RFC4-213, Transcript of replication factor C subunit 4, humanhuman

TSL 3

Gene RFC4, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-213ENST00000489028 DLEU7Q6UYE1 221 aa2.5□□□□□ -2.01
RFC4-213ENST00000489028 ADAMTSL2Q86TH1 951 aa2.5□□□□□ -2.01
RFC4-213ENST00000489028 LINC00518Q8N0U6 118 aa2.5□□□□□ -2.01
RFC4-213ENST00000489028 TMEM185AQ8NFB2 350 aa2.5□□□□□ -2.01
RFC4-213ENST00000489028 OR52E1Q8NGJ3 308 aa2.5□□□□□ -2.01
RFC4-213ENST00000489028 FAF2Q96CS3 445 aa2.5□□□□□ -2.01
RFC4-213ENST00000489028 C14orf79Q96F83 325 aa2.5□□□□□ -2.01
RFC4-213ENST00000489028 SPATA13Q96N96 652 aa2.5□□□□□ -2.01
RFC4-213ENST00000489028 CASD1Q96PB1 797 aa2.5□□□□□ -2.01
RFC4-213ENST00000489028 FUNDC2Q9BWH2 189 aa2.5□□□□□ -2.01
RFC4-213ENST00000489028 ABCG4Q9H172 646 aa2.5□□□□□ -2.01
RFC4-213ENST00000489028 DCLRE1BQ9H816 532 aa2.5□□□□□ -2.01
RFC4-213ENST00000489028 KCNMB3Q9NPA1 279 aa2.5□□□□□ -2.01
RFC4-213ENST00000489028 POLE3Q9NRF9 147 aa2.5□□□□□ -2.01
RFC4-213ENST00000489028 PIGVQ9NUD9 493 aa2.5□□□□□ -2.01
RFC4-213ENST00000489028 DNPEPQ9ULA0 475 aa2.5□□□□□ -2.01
RFC4-213ENST00000489028 TMCC3Q9ULS5 477 aa2.5□□□□□ -2.01
RFC4-213ENST00000489028 ABCG2Q9UNQ0 655 aa2.5□□□□□ -2.01
RFC4-213ENST00000489028 AURKCQ9UQB9 309 aa2.5□□□□□ -2.01
RFC4-213ENST00000489028 CLCA3PQ9Y6N3 262 aa2.5□□□□□ -2.01
RFC4-213ENST00000489028 AFF2P51816 1311 aa2.49□□□□□ -2.01
RFC4-213ENST00000489028 RGSL1A5PLK6 1076 aa2.49□□□□□ -2.01
RFC4-213ENST00000489028 EPOPA6NHQ4 379 aa2.49□□□□□ -2.01
RFC4-213ENST00000489028 ZFP92A6NM28 416 aa2.49□□□□□ -2.01
RFC4-213ENST00000489028 A8MX80 341 aa2.49□□□□□ -2.01
RFC4-213ENST00000489028 SH2D1BO14796 132 aa2.49□□□□□ -2.01
RFC4-213ENST00000489028 LYPD3O95274 346 aa2.49□□□□□ -2.01
RFC4-213ENST00000489028 CXCL10P02778 98 aa2.49□□□□□ -2.01
RFC4-213ENST00000489028 PVRP15151 417 aa2.49□□□□□ -2.01
RFC4-213ENST00000489028 ACP1P24666 158 aa2.49□□□□□ -2.01
RFC4-213ENST00000489028 CCND2P30279 289 aa2.49□□□□□ -2.01
RFC4-213ENST00000489028 MAT2AP31153 395 aaKnown RBP2.49□□□□□ -2.01
RFC4-213ENST00000489028 CAMLGP49069 296 aa2.49□□□□□ -2.01
RFC4-213ENST00000489028 NUMBP49757 651 aa2.49□□□□□ -2.01
RFC4-213ENST00000489028 SLC7A2P52569 658 aa2.49□□□□□ -2.01
RFC4-213ENST00000489028 ZNF131P52739 623 aa2.49□□□□□ -2.01
RFC4-213ENST00000489028 GEMP55040 296 aa2.49□□□□□ -2.01
RFC4-213ENST00000489028 HAND2P61296 217 aa2.49□□□□□ -2.01
RFC4-213ENST00000489028 ZNF85Q03923 595 aa2.49□□□□□ -2.01
RFC4-213ENST00000489028 EXOSC7Q15024 291 aaKnown RBP2.49□□□□□ -2.01
RFC4-213ENST00000489028 CARTPTQ16568 116 aa2.49□□□□□ -2.01
RFC4-213ENST00000489028 TCHHL1Q5QJ38 904 aaPredicted RBP2.49□□□□□ -2.01
RFC4-213ENST00000489028 RAET1GQ6H3X3 334 aa2.49□□□□□ -2.01
RFC4-213ENST00000489028 RTL6Q6ICC9 239 aa2.49□□□□□ -2.01
RFC4-213ENST00000489028 OR6B2Q6IFH4 312 aa2.49□□□□□ -2.01
RFC4-213ENST00000489028 CDC42EP5Q6NZY7 148 aa2.49□□□□□ -2.01
RFC4-213ENST00000489028 OLFM4Q6UX06 510 aa2.49□□□□□ -2.01
RFC4-213ENST00000489028 WDR88Q6ZMY6 472 aa2.49□□□□□ -2.01
RFC4-213ENST00000489028 KRTAP5-5Q701N2 237 aaPredicted RBP2.49□□□□□ -2.01
RFC4-213ENST00000489028 LUZP1Q86V48 1076 aa2.49□□□□□ -2.01
RFC4-213ENST00000489028 ZNF677Q86XU0 584 aa2.49□□□□□ -2.01
RFC4-213ENST00000489028 UNC5CLQ8IV45 518 aa2.49□□□□□ -2.01
RFC4-213ENST00000489028 CEND1Q8N111 149 aa2.49□□□□□ -2.01
RFC4-213ENST00000489028 Q8N9G6 341 aaPredicted RBP2.49□□□□□ -2.01
RFC4-213ENST00000489028 OR4A16Q8NH70 328 aa2.49□□□□□ -2.01
RFC4-213ENST00000489028 LINC01006Q8NI28 216 aa2.49□□□□□ -2.01
RFC4-213ENST00000489028 SAMD8Q96LT4 415 aa2.49□□□□□ -2.01
RFC4-213ENST00000489028 C19orf43Q9BQ61 176 aa2.49□□□□□ -2.01
RFC4-213ENST00000489028 FAM173AQ9BQD7 235 aa2.49□□□□□ -2.01
RFC4-213ENST00000489028 GPR174Q9BXC1 333 aa2.49□□□□□ -2.01
RFC4-213ENST00000489028 RAB17Q9H0T7 212 aa2.49□□□□□ -2.01
RFC4-213ENST00000489028 GANQ9H2C0 597 aa2.49□□□□□ -2.01
RFC4-213ENST00000489028 RWDD1Q9H446 243 aaPredicted RBP2.49□□□□□ -2.01
RFC4-213ENST00000489028 DCTPP1Q9H773 170 aa2.49□□□□□ -2.01
RFC4-213ENST00000489028 NRN1Q9NPD7 142 aa2.49□□□□□ -2.01
RFC4-213ENST00000489028 ACOXLQ9NUZ1 547 aa2.49□□□□□ -2.01
RFC4-213ENST00000489028 SENP1Q9P0U3 644 aa2.49□□□□□ -2.01
RFC4-213ENST00000489028 TUBGCP4Q9UGJ1 667 aa2.49□□□□□ -2.01
RFC4-213ENST00000489028 CIDEBQ9UHD4 219 aa2.49□□□□□ -2.01
RFC4-213ENST00000489028 SH3BGRL2Q9UJC5 107 aa2.49□□□□□ -2.01
RFC4-213ENST00000489028 EMCNQ9ULC0 261 aa2.49□□□□□ -2.01
RFC4-213ENST00000489028 MRPS2Q9Y399 296 aaKnown RBP2.49□□□□□ -2.01
RFC4-213ENST00000489028 ATP6V0A2Q9Y487 856 aa2.49□□□□□ -2.01
RFC4-213ENST00000489028 RNF115Q9Y4L5 304 aa2.49□□□□□ -2.01
RFC4-213ENST00000489028 AP1M2Q9Y6Q5 423 aa2.49□□□□□ -2.01
RFC4-213ENST00000489028 UBE4BO95155 1302 aa2.48□□□□□ -2.01
RFC4-213ENST00000489028 IGKV6D-21A0A0A0MT36 114 aa2.48□□□□□ -2.01
RFC4-213ENST00000489028 EEF2KO00418 725 aaKnown RBP2.48□□□□□ -2.01
RFC4-213ENST00000489028 CHEK1O14757 476 aa2.48□□□□□ -2.01
RFC4-213ENST00000489028 NME2P1O60361 137 aa2.48□□□□□ -2.01
RFC4-213ENST00000489028 NUDT14O95848 222 aa2.48□□□□□ -2.01
RFC4-213ENST00000489028 TGFAP01135 160 aa2.48□□□□□ -2.01
RFC4-213ENST00000489028 PRB2P02812 416 aaPredicted RBP2.48□□□□□ -2.01
RFC4-213ENST00000489028 HEXBP07686 556 aa2.48□□□□□ -2.01
RFC4-213ENST00000489028 SNRPCP09234 159 aaKnown RBP2.48□□□□□ -2.01
RFC4-213ENST00000489028 MGMTP16455 207 aa2.48□□□□□ -2.01
RFC4-213ENST00000489028 SAA4P35542 130 aa2.48□□□□□ -2.01
RFC4-213ENST00000489028 ARHGDIBP52566 201 aa2.48□□□□□ -2.01
RFC4-213ENST00000489028 VCPP55072 806 aaKnown RBP2.48□□□□□ -2.01
RFC4-213ENST00000489028 DPYSQ14117 519 aa2.48□□□□□ -2.01
RFC4-213ENST00000489028 TRADDQ15628 312 aa2.48□□□□□ -2.01
RFC4-213ENST00000489028 CD226Q15762 336 aa2.48□□□□□ -2.01
RFC4-213ENST00000489028 HAGHQ16775 308 aa2.48□□□□□ -2.01
RFC4-213ENST00000489028 QRICH1Q2TAL8 776 aa2.48□□□□□ -2.01
RFC4-213ENST00000489028 HERC4Q5GLZ8 1057 aaPredicted RBP2.48□□□□□ -2.01
RFC4-213ENST00000489028 PRAMEF7Q5VXH5 474 aa2.48□□□□□ -2.01
RFC4-213ENST00000489028 IRGCQ6NXR0 463 aa2.48□□□□□ -2.01
RFC4-213ENST00000489028 STOX1Q6ZVD7 989 aa2.48□□□□□ -2.01
RFC4-213ENST00000489028 C1orf186Q6ZWK4 172 aa2.48□□□□□ -2.01
RFC4-213ENST00000489028 GPR65Q8IYL9 337 aa2.48□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms