RNA–Protein interactions for RNA: ENST00000488860.1

TRAIP-209, Transcript of TRAF interacting protein, humanhuman

TSL 3

Gene TRAIP, Length 326 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-209ENST00000488860 GPATCH1Q9BRR8 931 aaKnown RBP11.4□□□□□ -0.58
TRAIP-209ENST00000488860 SPAG4Q9NPE6 437 aa11.4□□□□□ -0.58
TRAIP-209ENST00000488860 PACSIN3Q9UKS6 424 aa11.4□□□□□ -0.58
TRAIP-209ENST00000488860 SEC23IPQ9Y6Y8 1000 aaKnown RBP11.4□□□□□ -0.58
TRAIP-209ENST00000488860 CFAP47Q6ZTR5 3102 aa11.39□□□□□ -0.59
TRAIP-209ENST00000488860 TMEM200CA6NKL6 621 aa11.39□□□□□ -0.59
TRAIP-209ENST00000488860 HMGN4O00479 90 aa11.39□□□□□ -0.59
TRAIP-209ENST00000488860 NME4O00746 187 aa11.39□□□□□ -0.59
TRAIP-209ENST00000488860 GYG2O15488 501 aa11.39□□□□□ -0.59
TRAIP-209ENST00000488860 SLC28A2O43868 658 aa11.39□□□□□ -0.59
TRAIP-209ENST00000488860 MAN1A2O60476 641 aa11.39□□□□□ -0.59
TRAIP-209ENST00000488860 HNRNPCL1O60812 293 aaKnown RBP11.39□□□□□ -0.59
TRAIP-209ENST00000488860 ITGA10O75578 1167 aa11.39□□□□□ -0.59
TRAIP-209ENST00000488860 ATP5HO75947 161 aa11.39□□□□□ -0.59
TRAIP-209ENST00000488860 OR2J2O76002 312 aa11.39□□□□□ -0.59
TRAIP-209ENST00000488860 NKX2-2O95096 273 aa11.39□□□□□ -0.59
TRAIP-209ENST00000488860 NUDT7P0C024 238 aa11.39□□□□□ -0.59
TRAIP-209ENST00000488860 CT45A8P0DMV1 189 aa11.39□□□□□ -0.59
TRAIP-209ENST00000488860 CT45A9P0DMV2 189 aa11.39□□□□□ -0.59
TRAIP-209ENST00000488860 KRT20P35900 424 aa11.39□□□□□ -0.59
TRAIP-209ENST00000488860 CPOXP36551 454 aa11.39□□□□□ -0.59
TRAIP-209ENST00000488860 PPICP45877 212 aa11.39□□□□□ -0.59
TRAIP-209ENST00000488860 MAN2A2P49641 1150 aa11.39□□□□□ -0.59
TRAIP-209ENST00000488860 MVDP53602 400 aa11.39□□□□□ -0.59
TRAIP-209ENST00000488860 NRG3P56975 720 aa11.39□□□□□ -0.59
TRAIP-209ENST00000488860 POU6F2P78424 691 aaPredicted RBP11.39□□□□□ -0.59
TRAIP-209ENST00000488860 HPCAP84074 193 aa11.39□□□□□ -0.59
TRAIP-209ENST00000488860 GPAT3Q53EU6 434 aa11.39□□□□□ -0.59
TRAIP-209ENST00000488860 CT45A2Q5DJT8 189 aa11.39□□□□□ -0.59
TRAIP-209ENST00000488860 CCNJQ5T5M9 372 aa11.39□□□□□ -0.59
TRAIP-209ENST00000488860 BNC2Q6ZN30 1099 aaPredicted RBP11.39□□□□□ -0.59
TRAIP-209ENST00000488860 GPR155Q7Z3F1 870 aa11.39□□□□□ -0.59
TRAIP-209ENST00000488860 IFNEQ86WN2 208 aa11.39□□□□□ -0.59
TRAIP-209ENST00000488860 RPS19BP1Q86WX3 136 aaKnown RBP11.39□□□□□ -0.59
TRAIP-209ENST00000488860 TAGAPQ8N103 731 aa11.39□□□□□ -0.59
TRAIP-209ENST00000488860 ZNF441Q8N8Z8 693 aa11.39□□□□□ -0.59
TRAIP-209ENST00000488860 KDF1Q8NAX2 398 aaPredicted RBP11.39□□□□□ -0.59
TRAIP-209ENST00000488860 OR4N2Q8NGD1 307 aa11.39□□□□□ -0.59
TRAIP-209ENST00000488860 MIPOL1Q8TD10 442 aa11.39□□□□□ -0.59
TRAIP-209ENST00000488860 XAGE5Q8WWM1 108 aa11.39□□□□□ -0.59
TRAIP-209ENST00000488860 SLC35A4Q96G79 324 aa11.39□□□□□ -0.59
TRAIP-209ENST00000488860 LMF1Q96S06 567 aa11.39□□□□□ -0.59
TRAIP-209ENST00000488860 STACQ99469 402 aa11.39□□□□□ -0.59
TRAIP-209ENST00000488860 PIGUQ9H490 435 aa11.39□□□□□ -0.59
TRAIP-209ENST00000488860 EXD2Q9NVH0 621 aa11.39□□□□□ -0.59
TRAIP-209ENST00000488860 CMTM6Q9NX76 183 aa11.39□□□□□ -0.59
TRAIP-209ENST00000488860 MYOTQ9UBF9 498 aa11.39□□□□□ -0.59
TRAIP-209ENST00000488860 P2RX2Q9UBL9 471 aa11.39□□□□□ -0.59
TRAIP-209ENST00000488860 ZMIZ1Q9ULJ6 1067 aa11.39□□□□□ -0.59
TRAIP-209ENST00000488860 CBLCQ9ULV8 474 aa11.39□□□□□ -0.59
TRAIP-209ENST00000488860 GPR55Q9Y2T6 319 aaPredicted RBP11.39□□□□□ -0.59
TRAIP-209ENST00000488860 KCNMB2Q9Y691 235 aa11.39□□□□□ -0.59
TRAIP-209ENST00000488860 KCNE3Q9Y6H6 103 aa11.39□□□□□ -0.59
TRAIP-209ENST00000488860 CHD8Q9HCK8 2581 aa11.38□□□□□ -0.59
TRAIP-209ENST00000488860 TMEM247A6NEH6 219 aa11.38□□□□□ -0.59
TRAIP-209ENST00000488860 ERICH4A6NGS2 130 aa11.38□□□□□ -0.59
TRAIP-209ENST00000488860 TTC36A6NLP5 189 aa11.38□□□□□ -0.59
TRAIP-209ENST00000488860 DUXAA6NLW8 204 aa11.38□□□□□ -0.59
TRAIP-209ENST00000488860 A8MVJ9 347 aa11.38□□□□□ -0.59
TRAIP-209ENST00000488860 ASNA1O43681 348 aa11.38□□□□□ -0.59
TRAIP-209ENST00000488860 AGR2O95994 175 aa11.38□□□□□ -0.59
TRAIP-209ENST00000488860 BCHEP06276 602 aa11.38□□□□□ -0.59
TRAIP-209ENST00000488860 NR2F1P10589 423 aa11.38□□□□□ -0.59
TRAIP-209ENST00000488860 DRD5P21918 477 aa11.38□□□□□ -0.59
TRAIP-209ENST00000488860 IL12BP29460 328 aa11.38□□□□□ -0.59
TRAIP-209ENST00000488860 TRHRP34981 398 aaPredicted RBP11.38□□□□□ -0.59
TRAIP-209ENST00000488860 RASSF2P50749 326 aa11.38□□□□□ -0.59
TRAIP-209ENST00000488860 SSR4P51571 173 aa11.38□□□□□ -0.59
TRAIP-209ENST00000488860 MLF1P58340 268 aa11.38□□□□□ -0.59
TRAIP-209ENST00000488860 NCALDP61601 193 aa11.38□□□□□ -0.59
TRAIP-209ENST00000488860 MRPS22P82650 360 aaKnown RBP11.38□□□□□ -0.59
TRAIP-209ENST00000488860 TXNL4AP83876 142 aaKnown RBP11.38□□□□□ -0.59
TRAIP-209ENST00000488860 LIPEQ05469 1076 aa11.38□□□□□ -0.59
TRAIP-209ENST00000488860 MEP1AQ16819 746 aa11.38□□□□□ -0.59
TRAIP-209ENST00000488860 DNAL1Q4LDG9 190 aa11.38□□□□□ -0.59
TRAIP-209ENST00000488860 DCST2Q5T1A1 773 aa11.38□□□□□ -0.59
TRAIP-209ENST00000488860 ABHD17BQ5VST6 288 aa11.38□□□□□ -0.59
TRAIP-209ENST00000488860 BORAQ6PGQ7 559 aa11.38□□□□□ -0.59
TRAIP-209ENST00000488860 FIGNL1Q6PIW4 674 aa11.38□□□□□ -0.59
TRAIP-209ENST00000488860 LINC00696Q6ZRV3 163 aa11.38□□□□□ -0.59
TRAIP-209ENST00000488860 OLIG3Q7RTU3 272 aa11.38□□□□□ -0.59
TRAIP-209ENST00000488860 SLC15A3Q8IY34 581 aa11.38□□□□□ -0.59
TRAIP-209ENST00000488860 SLC34A3Q8N130 599 aa11.38□□□□□ -0.59
TRAIP-209ENST00000488860 RNF148Q8N7C7 305 aa11.38□□□□□ -0.59
TRAIP-209ENST00000488860 C17orf47Q8NEP4 570 aa11.38□□□□□ -0.59
TRAIP-209ENST00000488860 FDCSPQ8NFU4 85 aa11.38□□□□□ -0.59
TRAIP-209ENST00000488860 NFKBIDQ8NI38 313 aa11.38□□□□□ -0.59
TRAIP-209ENST00000488860 APOBEC4Q8WW27 367 aaKnown RBP11.38□□□□□ -0.59
TRAIP-209ENST00000488860 ASB15Q8WXK1 588 aa11.38□□□□□ -0.59
TRAIP-209ENST00000488860 MAL2Q969L2 176 aa11.38□□□□□ -0.59
TRAIP-209ENST00000488860 TMBIM1Q969X1 311 aa11.38□□□□□ -0.59
TRAIP-209ENST00000488860 TP53INP1Q96A56 240 aa11.38□□□□□ -0.59
TRAIP-209ENST00000488860 EFHD2Q96C19 240 aaPredicted RBP11.38□□□□□ -0.59
TRAIP-209ENST00000488860 OMA1Q96E52 524 aa11.38□□□□□ -0.59
TRAIP-209ENST00000488860 HSPBAP1Q96EW2 488 aa11.38□□□□□ -0.59
TRAIP-209ENST00000488860 CRELD1Q96HD1 420 aa11.38□□□□□ -0.59
TRAIP-209ENST00000488860 ZNF354BQ96LW1 612 aa11.38□□□□□ -0.59
TRAIP-209ENST00000488860 RASL10BQ96S79 203 aa11.38□□□□□ -0.59
TRAIP-209ENST00000488860 BTBD2Q9BX70 525 aa11.38□□□□□ -0.59
TRAIP-209ENST00000488860 KAT8Q9H7Z6 458 aaKnown RBP11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms