RNA–Protein interactions for RNA: ENST00000488494.5

ITGB1-215, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-215ENST00000488494 LSM1O15116 133 aaKnown RBP16.22■□□□□ 0.19
ITGB1-215ENST00000488494 WDR1O75083 606 aa16.22■□□□□ 0.19
ITGB1-215ENST00000488494 REM1O75628 298 aa16.22■□□□□ 0.19
ITGB1-215ENST00000488494 SLITRK5O94991 958 aa16.22■□□□□ 0.19
ITGB1-215ENST00000488494 ELAVL4P26378 380 aaKnown RBP16.22■□□□□ 0.19
ITGB1-215ENST00000488494 IL12BP29460 328 aa16.22■□□□□ 0.19
ITGB1-215ENST00000488494 PTGDSP41222 190 aa16.22■□□□□ 0.19
ITGB1-215ENST00000488494 GALNTL6Q49A17 601 aa16.22■□□□□ 0.19
ITGB1-215ENST00000488494 C1orf185Q5T7R7 199 aa16.22■□□□□ 0.19
ITGB1-215ENST00000488494 TIGD3Q6B0B8 471 aa16.22■□□□□ 0.19
ITGB1-215ENST00000488494 RTL6Q6ICC9 239 aa16.22■□□□□ 0.19
ITGB1-215ENST00000488494 TMEM81Q6P7N7 255 aa16.22■□□□□ 0.19
ITGB1-215ENST00000488494 Q6ZSR9 355 aa16.22■□□□□ 0.19
ITGB1-215ENST00000488494 ACAD11Q709F0 780 aa16.22■□□□□ 0.19
ITGB1-215ENST00000488494 SLC44A2Q8IWA5 706 aaPredicted RBP16.22■□□□□ 0.19
ITGB1-215ENST00000488494 ASB5Q8WWX0 329 aa16.22■□□□□ 0.19
ITGB1-215ENST00000488494 NTNG2Q96CW9 530 aa16.22■□□□□ 0.19
ITGB1-215ENST00000488494 AMDHD1Q96NU7 426 aa16.22■□□□□ 0.19
ITGB1-215ENST00000488494 TSSK3Q96PN8 268 aa16.22■□□□□ 0.19
ITGB1-215ENST00000488494 ALKBH4Q9NXW9 302 aa16.22■□□□□ 0.19
ITGB1-215ENST00000488494 OR10H1Q9Y4A9 318 aa16.22■□□□□ 0.19
ITGB1-215ENST00000488494 TRAF6Q9Y4K3 522 aa16.22■□□□□ 0.19
ITGB1-215ENST00000488494 TACC2O95359 2948 aa16.22■□□□□ 0.19
ITGB1-215ENST00000488494 DNAJC13O75165 2243 aa16.21■□□□□ 0.19
ITGB1-215ENST00000488494 A0A087WV62 115 aa16.21■□□□□ 0.19
ITGB1-215ENST00000488494 C2orf72A6NCS6 295 aa16.21■□□□□ 0.19
ITGB1-215ENST00000488494 SNPHO15079 494 aa16.21■□□□□ 0.19
ITGB1-215ENST00000488494 RGS16O15492 202 aaPredicted RBP16.21■□□□□ 0.19
ITGB1-215ENST00000488494 PDPK1O15530 556 aa16.21■□□□□ 0.19
ITGB1-215ENST00000488494 AKAP10O43572 662 aa16.21■□□□□ 0.19
ITGB1-215ENST00000488494 TYROBPO43914 113 aa16.21■□□□□ 0.19
ITGB1-215ENST00000488494 ICOSLGO75144 302 aa16.21■□□□□ 0.19
ITGB1-215ENST00000488494 HPNP05981 417 aa16.21■□□□□ 0.19
ITGB1-215ENST00000488494 BPGMP07738 259 aa16.21■□□□□ 0.19
ITGB1-215ENST00000488494 GLI4P10075 376 aa16.21■□□□□ 0.19
ITGB1-215ENST00000488494 PTPN6P29350 595 aa16.21■□□□□ 0.19
ITGB1-215ENST00000488494 ARRB2P32121 409 aa16.21■□□□□ 0.19
ITGB1-215ENST00000488494 PTGER4P35408 488 aa16.21■□□□□ 0.19
ITGB1-215ENST00000488494 KRT20P35900 424 aa16.21■□□□□ 0.19
ITGB1-215ENST00000488494 KIR3DL1P43629 444 aa16.21■□□□□ 0.19
ITGB1-215ENST00000488494 PSPHP78330 225 aa16.21■□□□□ 0.19
ITGB1-215ENST00000488494 HSPB3Q12988 150 aa16.21■□□□□ 0.19
ITGB1-215ENST00000488494 SNTA1Q13424 505 aa16.21■□□□□ 0.19
ITGB1-215ENST00000488494 RFTN2Q52LD8 501 aaPredicted RBP16.21■□□□□ 0.19
ITGB1-215ENST00000488494 SLC30A6Q6NXT4 461 aa16.21■□□□□ 0.19
ITGB1-215ENST00000488494 LARP4Q71RC2 724 aaKnown RBP eCLIP16.21■□□□□ 0.19
ITGB1-215ENST00000488494 OR2L13Q8N349 312 aa16.21■□□□□ 0.19
ITGB1-215ENST00000488494 OR1J4Q8NGS1 313 aa16.21■□□□□ 0.19
ITGB1-215ENST00000488494 CIDECQ96AQ7 238 aaPredicted RBP16.21■□□□□ 0.19
ITGB1-215ENST00000488494 SLC35A4Q96G79 324 aa16.21■□□□□ 0.19
ITGB1-215ENST00000488494 PKNOX2Q96KN3 472 aa16.21■□□□□ 0.19
ITGB1-215ENST00000488494 ADOQ96SZ5 270 aa16.21■□□□□ 0.19
ITGB1-215ENST00000488494 TTYH2Q9BSA4 534 aa16.21■□□□□ 0.19
ITGB1-215ENST00000488494 RUBCNLQ9H714 662 aa16.21■□□□□ 0.19
ITGB1-215ENST00000488494 SERHLQ9NQF3 203 aa16.21■□□□□ 0.19
ITGB1-215ENST00000488494 GIMAP2Q9UG22 337 aa16.21■□□□□ 0.19
ITGB1-215ENST00000488494 MAPRE3Q9UPY8 281 aa16.21■□□□□ 0.19
ITGB1-215ENST00000488494 MYO9AB2RTY4 2548 aa16.2■□□□□ 0.18
ITGB1-215ENST00000488494 NKX2-6A6NCS4 301 aa16.2■□□□□ 0.18
ITGB1-215ENST00000488494 UPK1AO00322 258 aa16.2■□□□□ 0.18
ITGB1-215ENST00000488494 TSPAN2O60636 221 aa16.2■□□□□ 0.18
ITGB1-215ENST00000488494 ABCB7O75027 752 aa16.2■□□□□ 0.18
ITGB1-215ENST00000488494 PSMG1O95456 288 aa16.2■□□□□ 0.18
ITGB1-215ENST00000488494 FGF4P08620 206 aa16.2■□□□□ 0.18
ITGB1-215ENST00000488494 ETV4P43268 484 aa16.2■□□□□ 0.18
ITGB1-215ENST00000488494 CRYZQ08257 329 aaKnown RBP16.2■□□□□ 0.18
ITGB1-215ENST00000488494 UGT3A2Q3SY77 523 aa16.2■□□□□ 0.18
ITGB1-215ENST00000488494 EIPR1Q53HC9 387 aa16.2■□□□□ 0.18
ITGB1-215ENST00000488494 ZNF385BQ569K4 471 aa16.2■□□□□ 0.18
ITGB1-215ENST00000488494 ZNF551Q7Z340 670 aaPredicted RBP16.2■□□□□ 0.18
ITGB1-215ENST00000488494 WDR53Q7Z5U6 358 aaPredicted RBP16.2■□□□□ 0.18
ITGB1-215ENST00000488494 ULK2Q8IYT8 1036 aa16.2■□□□□ 0.18
ITGB1-215ENST00000488494 CLYBLQ8N0X4 340 aa16.2■□□□□ 0.18
ITGB1-215ENST00000488494 OR4N2Q8NGD1 307 aa16.2■□□□□ 0.18
ITGB1-215ENST00000488494 OR10Q1Q8NGQ4 319 aa16.2■□□□□ 0.18
ITGB1-215ENST00000488494 EFHD2Q96C19 240 aaPredicted RBP16.2■□□□□ 0.18
ITGB1-215ENST00000488494 PPCDCQ96CD2 204 aa16.2■□□□□ 0.18
ITGB1-215ENST00000488494 TMCO6Q96DC7 493 aa16.2■□□□□ 0.18
ITGB1-215ENST00000488494 ZNF764Q96H86 408 aaPredicted RBP16.2■□□□□ 0.18
ITGB1-215ENST00000488494 TRIM8Q9BZR9 551 aa16.2■□□□□ 0.18
ITGB1-215ENST00000488494 RAB21Q9UL25 225 aa16.2■□□□□ 0.18
ITGB1-215ENST00000488494 C19orf53Q9UNZ5 99 aaPredicted RBP16.2■□□□□ 0.18
ITGB1-215ENST00000488494 SLC6A5Q9Y345 797 aa16.2■□□□□ 0.18
ITGB1-215ENST00000488494 TMED5Q9Y3A6 229 aa16.2■□□□□ 0.18
ITGB1-215ENST00000488494 PLOD2O00469 737 aa16.19■□□□□ 0.18
ITGB1-215ENST00000488494 SKAP2O75563 359 aaPredicted RBP16.19■□□□□ 0.18
ITGB1-215ENST00000488494 GABRA1P14867 456 aa16.19■□□□□ 0.18
ITGB1-215ENST00000488494 SERPINB5P36952 375 aa16.19■□□□□ 0.18
ITGB1-215ENST00000488494 PSG6Q00889 435 aa16.19■□□□□ 0.18
ITGB1-215ENST00000488494 EFR3AQ14156 821 aa16.19■□□□□ 0.18
ITGB1-215ENST00000488494 XKR7Q5GH72 579 aa16.19■□□□□ 0.18
ITGB1-215ENST00000488494 WIPI1Q5MNZ9 446 aaPredicted RBP16.19■□□□□ 0.18
ITGB1-215ENST00000488494 GDF7Q7Z4P5 450 aa16.19■□□□□ 0.18
ITGB1-215ENST00000488494 FAM83FQ8NEG4 500 aaPredicted RBP16.19■□□□□ 0.18
ITGB1-215ENST00000488494 ZBTB9Q96C00 473 aa16.19■□□□□ 0.18
ITGB1-215ENST00000488494 ELP4Q96EB1 424 aa16.19■□□□□ 0.18
ITGB1-215ENST00000488494 UCK2Q9BZX2 261 aa16.19■□□□□ 0.18
ITGB1-215ENST00000488494 CENPHQ9H3R5 247 aa16.19■□□□□ 0.18
ITGB1-215ENST00000488494 REEP4Q9H6H4 257 aa16.19■□□□□ 0.18
ITGB1-215ENST00000488494 EQTNQ9NQ60 294 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms