RNA–Protein interactions for RNA: ENST00000488463.5

COL9A2-208, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 5

Gene COL9A2, Length 1,005 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-208ENST00000488463 HOXB13Q92826 284 aaPredicted RBP13.01□□□□□ -0.33
COL9A2-208ENST00000488463 TMBIM1Q969X1 311 aa13.01□□□□□ -0.33
COL9A2-208ENST00000488463 MTERF3Q96E29 417 aa13.01□□□□□ -0.33
COL9A2-208ENST00000488463 SLC35A4Q96G79 324 aa13.01□□□□□ -0.33
COL9A2-208ENST00000488463 DOHHQ9BU89 302 aa13.01□□□□□ -0.33
COL9A2-208ENST00000488463 KCNK9Q9NPC2 374 aa13.01□□□□□ -0.33
COL9A2-208ENST00000488463 ATP6V1HQ9UI12 483 aa13.01□□□□□ -0.33
COL9A2-208ENST00000488463 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.01□□□□□ -0.33
COL9A2-208ENST00000488463 RAP2CQ9Y3L5 183 aa13.01□□□□□ -0.33
COL9A2-208ENST00000488463 PCNX3Q9H6A9 2034 aa13□□□□□ -0.33
COL9A2-208ENST00000488463 GIMAP1-GIMAP5A0A087WTJ2 511 aa13□□□□□ -0.33
COL9A2-208ENST00000488463 TMEM120BA0PK00 339 aa13□□□□□ -0.33
COL9A2-208ENST00000488463 OR6C70A6NIJ9 312 aa13□□□□□ -0.33
COL9A2-208ENST00000488463 B4DXG7 233 aa13□□□□□ -0.33
COL9A2-208ENST00000488463 PDPK1O15530 556 aa13□□□□□ -0.33
COL9A2-208ENST00000488463 SUSD5O60279 629 aa13□□□□□ -0.33
COL9A2-208ENST00000488463 HSPA4LO95757 839 aa13□□□□□ -0.33
COL9A2-208ENST00000488463 GRK2P25098 689 aa13□□□□□ -0.33
COL9A2-208ENST00000488463 COL8A1P27658 744 aa13□□□□□ -0.33
COL9A2-208ENST00000488463 NTSP30990 170 aa13□□□□□ -0.33
COL9A2-208ENST00000488463 ASMTP46597 345 aa13□□□□□ -0.33
COL9A2-208ENST00000488463 SLC1A6P48664 564 aa13□□□□□ -0.33
COL9A2-208ENST00000488463 PLCXD2Q0VAA5 305 aa13□□□□□ -0.33
COL9A2-208ENST00000488463 BST1Q10588 318 aa13□□□□□ -0.33
COL9A2-208ENST00000488463 CASP8Q14790 479 aa13□□□□□ -0.33
COL9A2-208ENST00000488463 CDSNQ15517 529 aa13□□□□□ -0.33
COL9A2-208ENST00000488463 EXOSC6Q5RKV6 272 aaKnown RBP13□□□□□ -0.33
COL9A2-208ENST00000488463 C3P1Q6ZMU1 363 aa13□□□□□ -0.33
COL9A2-208ENST00000488463 CD163Q86VB7 1156 aa13□□□□□ -0.33
COL9A2-208ENST00000488463 LIX1Q8N485 282 aa13□□□□□ -0.33
COL9A2-208ENST00000488463 MARVELD2Q8N4S9 558 aa13□□□□□ -0.33
COL9A2-208ENST00000488463 GIMAP5Q96F15 307 aa13□□□□□ -0.33
COL9A2-208ENST00000488463 C1orf50Q9BV19 199 aa13□□□□□ -0.33
COL9A2-208ENST00000488463 ACKR4Q9NPB9 350 aa13□□□□□ -0.33
COL9A2-208ENST00000488463 QPCTLQ9NXS2 382 aa13□□□□□ -0.33
COL9A2-208ENST00000488463 ASIC5Q9NY37 505 aa13□□□□□ -0.33
COL9A2-208ENST00000488463 TAS2R9Q9NYW1 312 aa13□□□□□ -0.33
COL9A2-208ENST00000488463 SPRR3Q9UBC9 169 aa13□□□□□ -0.33
COL9A2-208ENST00000488463 BOKQ9UMX3 212 aaPredicted RBP13□□□□□ -0.33
COL9A2-208ENST00000488463 POLQO75417 2590 aa13□□□□□ -0.33
COL9A2-208ENST00000488463 CACNA1DQ01668 2161 aa13□□□□□ -0.33
COL9A2-208ENST00000488463 E9PLN8 166 aa12.99□□□□□ -0.33
COL9A2-208ENST00000488463 AQP7O14520 342 aa12.99□□□□□ -0.33
COL9A2-208ENST00000488463 PRRG2O14669 202 aa12.99□□□□□ -0.33
COL9A2-208ENST00000488463 SCAMP2O15127 329 aaKnown RBP12.99□□□□□ -0.33
COL9A2-208ENST00000488463 HCN1O60741 890 aa12.99□□□□□ -0.33
COL9A2-208ENST00000488463 ICOSLGO75144 302 aa12.99□□□□□ -0.33
COL9A2-208ENST00000488463 SNX4O95219 450 aa12.99□□□□□ -0.33
COL9A2-208ENST00000488463 LAMP1P11279 417 aa12.99□□□□□ -0.33
COL9A2-208ENST00000488463 CDK9P50750 372 aaKnown RBP12.99□□□□□ -0.33
COL9A2-208ENST00000488463 GAS1P54826 345 aa12.99□□□□□ -0.33
COL9A2-208ENST00000488463 C21orf58P58505 322 aa12.99□□□□□ -0.33
COL9A2-208ENST00000488463 MAGOHP61326 146 aaKnown RBP12.99□□□□□ -0.33
COL9A2-208ENST00000488463 SNTA1Q13424 505 aa12.99□□□□□ -0.33
COL9A2-208ENST00000488463 SLC10A1Q14973 349 aa12.99□□□□□ -0.33
COL9A2-208ENST00000488463 ATP6AP1LQ52LC2 224 aa12.99□□□□□ -0.33
COL9A2-208ENST00000488463 IL23RQ5VWK5 629 aa12.99□□□□□ -0.33
COL9A2-208ENST00000488463 RPRMLQ8N4K4 120 aa12.99□□□□□ -0.33
COL9A2-208ENST00000488463 KRTCAP2Q8N6L1 136 aa12.99□□□□□ -0.33
COL9A2-208ENST00000488463 OR7A2PQ8NGA2 310 aa12.99□□□□□ -0.33
COL9A2-208ENST00000488463 PPP1R14CQ8TAE6 165 aa12.99□□□□□ -0.33
COL9A2-208ENST00000488463 PHF10Q8WUB8 498 aaKnown RBP12.99□□□□□ -0.33
COL9A2-208ENST00000488463 PPCDCQ96CD2 204 aa12.99□□□□□ -0.33
COL9A2-208ENST00000488463 TMEM41AQ96HV5 264 aa12.99□□□□□ -0.33
COL9A2-208ENST00000488463 ZNF597Q96LX8 424 aa12.99□□□□□ -0.33
COL9A2-208ENST00000488463 COL21A1Q96P44 957 aa12.99□□□□□ -0.33
COL9A2-208ENST00000488463 GNRHR2Q96P88 292 aa12.99□□□□□ -0.33
COL9A2-208ENST00000488463 VKORC1Q9BQB6 163 aa12.99□□□□□ -0.33
COL9A2-208ENST00000488463 LMF2Q9BU23 707 aaKnown RBP12.99□□□□□ -0.33
COL9A2-208ENST00000488463 GALNT9Q9HCQ5 603 aa12.99□□□□□ -0.33
COL9A2-208ENST00000488463 SIRT3Q9NTG7 399 aaPredicted RBP12.99□□□□□ -0.33
COL9A2-208ENST00000488463 ACSS1Q9NUB1 689 aaPredicted RBP12.99□□□□□ -0.33
COL9A2-208ENST00000488463 C15orf41Q9Y2V0 281 aa12.99□□□□□ -0.33
COL9A2-208ENST00000488463 OR14I1A6ND48 311 aa12.98□□□□□ -0.33
COL9A2-208ENST00000488463 ATP8B1O43520 1251 aa12.98□□□□□ -0.33
COL9A2-208ENST00000488463 COQ9O75208 318 aa12.98□□□□□ -0.33
COL9A2-208ENST00000488463 SNNO75324 88 aaPredicted RBP12.98□□□□□ -0.33
COL9A2-208ENST00000488463 SNUPNO95149 360 aaKnown RBP12.98□□□□□ -0.33
COL9A2-208ENST00000488463 HPNP05981 417 aa12.98□□□□□ -0.33
COL9A2-208ENST00000488463 TPOP07202 933 aa12.98□□□□□ -0.33
COL9A2-208ENST00000488463 PRPS2P11908 318 aa12.98□□□□□ -0.33
COL9A2-208ENST00000488463 EFNA1P20827 205 aaPredicted RBP12.98□□□□□ -0.33
COL9A2-208ENST00000488463 MAPK1P28482 360 aa12.98□□□□□ -0.33
COL9A2-208ENST00000488463 PTPN6P29350 595 aa12.98□□□□□ -0.33
COL9A2-208ENST00000488463 RPL14P50914 215 aaKnown RBP12.98□□□□□ -0.33
COL9A2-208ENST00000488463 CASP6P55212 293 aa12.98□□□□□ -0.33
COL9A2-208ENST00000488463 PSPHP78330 225 aa12.98□□□□□ -0.33
COL9A2-208ENST00000488463 EMX2Q04743 252 aa12.98□□□□□ -0.33
COL9A2-208ENST00000488463 HSPB3Q12988 150 aa12.98□□□□□ -0.33
COL9A2-208ENST00000488463 STX3Q13277 289 aa12.98□□□□□ -0.33
COL9A2-208ENST00000488463 GAB1Q13480 694 aa12.98□□□□□ -0.33
COL9A2-208ENST00000488463 MLC1Q15049 377 aa12.98□□□□□ -0.33
COL9A2-208ENST00000488463 PDCD2Q16342 344 aaPredicted RBP12.98□□□□□ -0.33
COL9A2-208ENST00000488463 SMU1Q2TAY7 513 aa12.98□□□□□ -0.33
COL9A2-208ENST00000488463 GXYLT1Q4G148 440 aa12.98□□□□□ -0.33
COL9A2-208ENST00000488463 TIGD3Q6B0B8 471 aa12.98□□□□□ -0.33
COL9A2-208ENST00000488463 RTL6Q6ICC9 239 aa12.98□□□□□ -0.33
COL9A2-208ENST00000488463 MTFR2Q6P444 385 aa12.98□□□□□ -0.33
COL9A2-208ENST00000488463 PAOXQ6QHF9 649 aa12.98□□□□□ -0.33
COL9A2-208ENST00000488463 RPTNQ6XPR3 784 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms