RNA–Protein interactions for RNA: ENST00000488293.4

MECP2-210, Transcript of methyl-CpG binding protein 2, humanhuman

TSL 5

Gene MECP2, Length 1,198 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-210ENST00000488293 FOLH1BQ9HBA9 442 aa12.17□□□□□ -0.46
MECP2-210ENST00000488293 C1orf109Q9NX04 203 aa12.17□□□□□ -0.46
MECP2-210ENST00000488293 KLRF1Q9NZS2 232 aa12.17□□□□□ -0.46
MECP2-210ENST00000488293 Q9UFV3 132 aa12.17□□□□□ -0.46
MECP2-210ENST00000488293 EXO1Q9UQ84 846 aaKnown RBP12.17□□□□□ -0.46
MECP2-210ENST00000488293 CSMD2Q7Z408 3487 aa12.16□□□□□ -0.46
MECP2-210ENST00000488293 DOCK7Q96N67 2140 aa12.16□□□□□ -0.46
MECP2-210ENST00000488293 NKX2-6A6NCS4 301 aa12.16□□□□□ -0.46
MECP2-210ENST00000488293 PRAMEF25A6NGN4 478 aa12.16□□□□□ -0.46
MECP2-210ENST00000488293 FAM90A27PA6NNH2 459 aa12.16□□□□□ -0.46
MECP2-210ENST00000488293 PLOD2O00469 737 aa12.16□□□□□ -0.46
MECP2-210ENST00000488293 SNPHO15079 494 aa12.16□□□□□ -0.46
MECP2-210ENST00000488293 NPHS1O60500 1241 aa12.16□□□□□ -0.46
MECP2-210ENST00000488293 TSPAN2O60636 221 aa12.16□□□□□ -0.46
MECP2-210ENST00000488293 COQ9O75208 318 aa12.16□□□□□ -0.46
MECP2-210ENST00000488293 REM1O75628 298 aa12.16□□□□□ -0.46
MECP2-210ENST00000488293 CBR3O75828 277 aa12.16□□□□□ -0.46
MECP2-210ENST00000488293 CHEK2O96017 543 aa12.16□□□□□ -0.46
MECP2-210ENST00000488293 JUNP05412 331 aaKnown RBP12.16□□□□□ -0.46
MECP2-210ENST00000488293 FGF4P08620 206 aa12.16□□□□□ -0.46
MECP2-210ENST00000488293 IFI6P09912 130 aa12.16□□□□□ -0.46
MECP2-210ENST00000488293 NEFHP12036 1026 aa12.16□□□□□ -0.46
MECP2-210ENST00000488293 IGFBP2P18065 325 aa12.16□□□□□ -0.46
MECP2-210ENST00000488293 ALDH3A1P30838 453 aa12.16□□□□□ -0.46
MECP2-210ENST00000488293 NTSP30990 170 aa12.16□□□□□ -0.46
MECP2-210ENST00000488293 PTGDSP41222 190 aa12.16□□□□□ -0.46
MECP2-210ENST00000488293 NCBP2P52298 156 aaKnown RBP eCLIP12.16□□□□□ -0.46
MECP2-210ENST00000488293 PNLIPRP2P54317 469 aa12.16□□□□□ -0.46
MECP2-210ENST00000488293 CORO7P57737 925 aa12.16□□□□□ -0.46
MECP2-210ENST00000488293 MRPS22P82650 360 aaKnown RBP12.16□□□□□ -0.46
MECP2-210ENST00000488293 TFF3Q07654 80 aa12.16□□□□□ -0.46
MECP2-210ENST00000488293 EFR3AQ14156 821 aa12.16□□□□□ -0.46
MECP2-210ENST00000488293 TOMM20Q15388 145 aa12.16□□□□□ -0.46
MECP2-210ENST00000488293 PRSS53Q2L4Q9 553 aa12.16□□□□□ -0.46
MECP2-210ENST00000488293 RIPPLY2Q5TAB7 128 aa12.16□□□□□ -0.46
MECP2-210ENST00000488293 DESI1Q6ICB0 168 aa12.16□□□□□ -0.46
MECP2-210ENST00000488293 PM20D2Q8IYS1 436 aa12.16□□□□□ -0.46
MECP2-210ENST00000488293 CAVIN3Q969G5 261 aa12.16□□□□□ -0.46
MECP2-210ENST00000488293 C14orf79Q96F83 325 aa12.16□□□□□ -0.46
MECP2-210ENST00000488293 FAM111AQ96PZ2 611 aa12.16□□□□□ -0.46
MECP2-210ENST00000488293 TIMP4Q99727 224 aa12.16□□□□□ -0.46
MECP2-210ENST00000488293 PRDM14Q9GZV8 571 aa12.16□□□□□ -0.46
MECP2-210ENST00000488293 LRTM1Q9HBL6 345 aa12.16□□□□□ -0.46
MECP2-210ENST00000488293 EML4Q9HC35 981 aaKnown RBP12.16□□□□□ -0.46
MECP2-210ENST00000488293 C19orf53Q9UNZ5 99 aaPredicted RBP12.16□□□□□ -0.46
MECP2-210ENST00000488293 SLU7O95391 586 aaKnown RBP12.15□□□□□ -0.46
MECP2-210ENST00000488293 EPPINO95925 133 aa12.15□□□□□ -0.46
MECP2-210ENST00000488293 ACTL6AO96019 429 aa12.15□□□□□ -0.46
MECP2-210ENST00000488293 BMP7P18075 431 aa12.15□□□□□ -0.46
MECP2-210ENST00000488293 MSX1P28360 303 aa12.15□□□□□ -0.46
MECP2-210ENST00000488293 IL12BP29460 328 aa12.15□□□□□ -0.46
MECP2-210ENST00000488293 GCKP35557 465 aa12.15□□□□□ -0.46
MECP2-210ENST00000488293 KRT20P35900 424 aa12.15□□□□□ -0.46
MECP2-210ENST00000488293 ADH7P40394 386 aa12.15□□□□□ -0.46
MECP2-210ENST00000488293 SLC25A35Q3KQZ1 300 aa12.15□□□□□ -0.46
MECP2-210ENST00000488293 WIPI1Q5MNZ9 446 aaPredicted RBP12.15□□□□□ -0.46
MECP2-210ENST00000488293 KANK2Q63ZY3 851 aa12.15□□□□□ -0.46
MECP2-210ENST00000488293 NPSR1Q6W5P4 371 aa12.15□□□□□ -0.46
MECP2-210ENST00000488293 Q6ZSR9 355 aa12.15□□□□□ -0.46
MECP2-210ENST00000488293 LARP4Q71RC2 724 aaKnown RBP eCLIP12.15□□□□□ -0.46
MECP2-210ENST00000488293 SLC44A2Q8IWA5 706 aaPredicted RBP12.15□□□□□ -0.46
MECP2-210ENST00000488293 CLYBLQ8N0X4 340 aa12.15□□□□□ -0.46
MECP2-210ENST00000488293 FAM83FQ8NEG4 500 aaPredicted RBP12.15□□□□□ -0.46
MECP2-210ENST00000488293 ELP4Q96EB1 424 aa12.15□□□□□ -0.46
MECP2-210ENST00000488293 DTNBP1Q96EV8 351 aa12.15□□□□□ -0.46
MECP2-210ENST00000488293 ZNF764Q96H86 408 aaPredicted RBP12.15□□□□□ -0.46
MECP2-210ENST00000488293 EGLN2Q96KS0 407 aa12.15□□□□□ -0.46
MECP2-210ENST00000488293 FCRL1Q96LA6 429 aa12.15□□□□□ -0.46
MECP2-210ENST00000488293 AMDHD1Q96NU7 426 aa12.15□□□□□ -0.46
MECP2-210ENST00000488293 ADOQ96SZ5 270 aa12.15□□□□□ -0.46
MECP2-210ENST00000488293 CCT7Q99832 543 aa12.15□□□□□ -0.46
MECP2-210ENST00000488293 TMEM109Q9BVC6 243 aa12.15□□□□□ -0.46
MECP2-210ENST00000488293 TUBB1Q9H4B7 451 aa12.15□□□□□ -0.46
MECP2-210ENST00000488293 GLIPR2Q9H4G4 154 aa12.15□□□□□ -0.46
MECP2-210ENST00000488293 GALNT9Q9HCQ5 603 aa12.15□□□□□ -0.46
MECP2-210ENST00000488293 NPDC1Q9NQX5 325 aaPredicted RBP12.15□□□□□ -0.46
MECP2-210ENST00000488293 SLC6A5Q9Y345 797 aa12.15□□□□□ -0.46
MECP2-210ENST00000488293 TMED5Q9Y3A6 229 aa12.15□□□□□ -0.46
MECP2-210ENST00000488293 DNAJC15Q9Y5T4 150 aa12.15□□□□□ -0.46
MECP2-210ENST00000488293 PCNX3Q9H6A9 2034 aa12.15□□□□□ -0.47
MECP2-210ENST00000488293 MED12Q93074 2177 aa12.14□□□□□ -0.47
MECP2-210ENST00000488293 C2orf72A6NCS6 295 aa12.14□□□□□ -0.47
MECP2-210ENST00000488293 HSPB2A8KAH6 182 aa12.14□□□□□ -0.47
MECP2-210ENST00000488293 UPK1AO00322 258 aa12.14□□□□□ -0.47
MECP2-210ENST00000488293 TBX19O60806 448 aa12.14□□□□□ -0.47
MECP2-210ENST00000488293 SPAG7O75391 227 aa12.14□□□□□ -0.47
MECP2-210ENST00000488293 NME6O75414 186 aaPredicted RBP12.14□□□□□ -0.47
MECP2-210ENST00000488293 PSMG1O95456 288 aa12.14□□□□□ -0.47
MECP2-210ENST00000488293 TACR1P25103 407 aa12.14□□□□□ -0.47
MECP2-210ENST00000488293 TIMP3P35625 211 aa12.14□□□□□ -0.47
MECP2-210ENST00000488293 MC3RP41968 323 aa12.14□□□□□ -0.47
MECP2-210ENST00000488293 PSG6Q00889 435 aa12.14□□□□□ -0.47
MECP2-210ENST00000488293 ZNF155Q12901 538 aaPredicted RBP12.14□□□□□ -0.47
MECP2-210ENST00000488293 HSPB2Q16082 182 aa12.14□□□□□ -0.47
MECP2-210ENST00000488293 CYP27C1Q4G0S4 372 aa12.14□□□□□ -0.47
MECP2-210ENST00000488293 ACSF3Q4G176 576 aaPredicted RBP12.14□□□□□ -0.47
MECP2-210ENST00000488293 EIPR1Q53HC9 387 aa12.14□□□□□ -0.47
MECP2-210ENST00000488293 ARL13AQ5H913 290 aaPredicted RBP12.14□□□□□ -0.47
MECP2-210ENST00000488293 TMEM107Q6UX40 140 aa12.14□□□□□ -0.47
MECP2-210ENST00000488293 PLCZ1Q86YW0 608 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms