RNA–Protein interactions for RNA: ENST00000487625.1

USP9X-208, Transcript of ubiquitin specific peptidase 9 X-linked, humanhuman

TSL 2

Gene USP9X, Length 581 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP9X-208ENST00000487625 C10orf88Q9H8K7 445 aa1.6□□□□□ -2.15
USP9X-208ENST00000487625 ROPN1Q9HAT0 212 aaPredicted RBP1.6□□□□□ -2.15
USP9X-208ENST00000487625 KCNK13Q9HB14 408 aa1.6□□□□□ -2.15
USP9X-208ENST00000487625 ZCCHC3Q9NUD5 404 aaKnown RBP1.6□□□□□ -2.15
USP9X-208ENST00000487625 KLHL28Q9NXS3 571 aa1.6□□□□□ -2.15
USP9X-208ENST00000487625 GTSE1Q9NYZ3 720 aa1.6□□□□□ -2.15
USP9X-208ENST00000487625 C19orf25Q9UFG5 118 aaPredicted RBP1.6□□□□□ -2.15
USP9X-208ENST00000487625 CHRNA9Q9UGM1 479 aa1.6□□□□□ -2.15
USP9X-208ENST00000487625 FOXJ3Q9UPW0 622 aa1.6□□□□□ -2.15
USP9X-208ENST00000487625 ZNF256Q9Y2P7 627 aaPredicted RBP1.6□□□□□ -2.15
USP9X-208ENST00000487625 SH3GLB1Q9Y371 365 aa1.6□□□□□ -2.15
USP9X-208ENST00000487625 TMED3Q9Y3Q3 217 aa1.6□□□□□ -2.15
USP9X-208ENST00000487625 UMODL1Q5DID0 1318 aa1.6□□□□□ -2.15
USP9X-208ENST00000487625 KIF27Q86VH2 1401 aa1.59□□□□□ -2.15
USP9X-208ENST00000487625 A0A075B6Q4 140 aa1.59□□□□□ -2.15
USP9X-208ENST00000487625 TRAV18A0A075B6X5 111 aa1.59□□□□□ -2.15
USP9X-208ENST00000487625 TRAV26-1A0A087WT03 109 aa1.59□□□□□ -2.15
USP9X-208ENST00000487625 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP1.59□□□□□ -2.15
USP9X-208ENST00000487625 A0A1B0GTQ1 180 aa1.59□□□□□ -2.15
USP9X-208ENST00000487625 HELTA6NFD8 242 aa1.59□□□□□ -2.15
USP9X-208ENST00000487625 ANKRD30BLA7E2S9 258 aa1.59□□□□□ -2.15
USP9X-208ENST00000487625 SRRM4A7MD48 611 aaKnown RBP1.59□□□□□ -2.15
USP9X-208ENST00000487625 NPIPB9F8W1W9 429 aa1.59□□□□□ -2.15
USP9X-208ENST00000487625 M0R296 226 aa1.59□□□□□ -2.15
USP9X-208ENST00000487625 NMT2O60551 498 aa1.59□□□□□ -2.15
USP9X-208ENST00000487625 NXPH4O95158 308 aa1.59□□□□□ -2.15
USP9X-208ENST00000487625 ACSL3O95573 720 aa1.59□□□□□ -2.15
USP9X-208ENST00000487625 CPNE6O95741 557 aa1.59□□□□□ -2.15
USP9X-208ENST00000487625 SNAI1O95863 264 aaPredicted RBP1.59□□□□□ -2.15
USP9X-208ENST00000487625 GOT2P00505 430 aaKnown RBP1.59□□□□□ -2.15
USP9X-208ENST00000487625 KRT14P02533 472 aa1.59□□□□□ -2.15
USP9X-208ENST00000487625 MT-ND1P03886 318 aa1.59□□□□□ -2.15
USP9X-208ENST00000487625 CRYGCP07315 174 aa1.59□□□□□ -2.15
USP9X-208ENST00000487625 CRYGBP07316 175 aa1.59□□□□□ -2.15
USP9X-208ENST00000487625 SFTPBP07988 381 aa1.59□□□□□ -2.15
USP9X-208ENST00000487625 SBK2P0C263 348 aa1.59□□□□□ -2.15
USP9X-208ENST00000487625 UBTFL6P0CB48 400 aaPredicted RBP1.59□□□□□ -2.15
USP9X-208ENST00000487625 CT45A8P0DMV1 189 aa1.59□□□□□ -2.15
USP9X-208ENST00000487625 CT45A9P0DMV2 189 aa1.59□□□□□ -2.15
USP9X-208ENST00000487625 RRASP10301 218 aa1.59□□□□□ -2.15
USP9X-208ENST00000487625 ZNF44P15621 663 aa1.59□□□□□ -2.15
USP9X-208ENST00000487625 RPA2P15927 270 aa1.59□□□□□ -2.15
USP9X-208ENST00000487625 PTBP1P26599 531 aaKnown RBP eCLIP1.59□□□□□ -2.15
USP9X-208ENST00000487625 PRDX6P30041 224 aa1.59□□□□□ -2.15
USP9X-208ENST00000487625 HSD17B2P37059 387 aa1.59□□□□□ -2.15
USP9X-208ENST00000487625 CETN2P41208 172 aa1.59□□□□□ -2.15
USP9X-208ENST00000487625 GRIA1P42261 906 aa1.59□□□□□ -2.15
USP9X-208ENST00000487625 OR3A3P47888 321 aa1.59□□□□□ -2.15
USP9X-208ENST00000487625 OR1G1P47890 313 aa1.59□□□□□ -2.15
USP9X-208ENST00000487625 SLC1A6P48664 564 aa1.59□□□□□ -2.15
USP9X-208ENST00000487625 CCL11P51671 97 aa1.59□□□□□ -2.15
USP9X-208ENST00000487625 CCR4P51679 360 aa1.59□□□□□ -2.15
USP9X-208ENST00000487625 HAND2P61296 217 aa1.59□□□□□ -2.15
USP9X-208ENST00000487625 CBX1P83916 185 aa1.59□□□□□ -2.15
USP9X-208ENST00000487625 MAP2K1Q02750 393 aaPredicted RBP1.59□□□□□ -2.15
USP9X-208ENST00000487625 CACNG1Q06432 222 aa1.59□□□□□ -2.15
USP9X-208ENST00000487625 SLC3A1Q07837 685 aa1.59□□□□□ -2.15
USP9X-208ENST00000487625 MFGE8Q08431 387 aaPredicted RBP1.59□□□□□ -2.15
USP9X-208ENST00000487625 SRSF5Q13243 272 aaKnown RBP1.59□□□□□ -2.15
USP9X-208ENST00000487625 ZNF177Q13360 481 aaPredicted RBP1.59□□□□□ -2.15
USP9X-208ENST00000487625 PLD1Q13393 1074 aa1.59□□□□□ -2.15
USP9X-208ENST00000487625 IL18Q14116 193 aa1.59□□□□□ -2.15
USP9X-208ENST00000487625 SELPLGQ14242 412 aa1.59□□□□□ -2.15
USP9X-208ENST00000487625 SSX2Q16385 188 aa1.59□□□□□ -2.15
USP9X-208ENST00000487625 EXOC3L2Q2M3D2 409 aa1.59□□□□□ -2.15
USP9X-208ENST00000487625 KCTD21Q4G0X4 260 aa1.59□□□□□ -2.15
USP9X-208ENST00000487625 MCMDC2Q4G0Z9 681 aa1.59□□□□□ -2.15
USP9X-208ENST00000487625 BCL7AQ4VC05 210 aa1.59□□□□□ -2.15
USP9X-208ENST00000487625 MPPE1Q53F39 396 aa1.59□□□□□ -2.15
USP9X-208ENST00000487625 CT45A2Q5DJT8 189 aa1.59□□□□□ -2.15
USP9X-208ENST00000487625 ZNF311Q5JNZ3 666 aa1.59□□□□□ -2.15
USP9X-208ENST00000487625 ARMC12Q5T9G4 340 aa1.59□□□□□ -2.15
USP9X-208ENST00000487625 FHL5Q5TD97 284 aa1.59□□□□□ -2.15
USP9X-208ENST00000487625 NKAIN2Q5VXU1 208 aa1.59□□□□□ -2.15
USP9X-208ENST00000487625 TMEM26Q6ZUK4 368 aa1.59□□□□□ -2.15
USP9X-208ENST00000487625 BZW1Q7L1Q6 419 aaKnown RBP1.59□□□□□ -2.15
USP9X-208ENST00000487625 CHMP1BQ7LBR1 199 aa1.59□□□□□ -2.15
USP9X-208ENST00000487625 TRPM8Q7Z2W7 1104 aa1.59□□□□□ -2.15
USP9X-208ENST00000487625 NANOGNBQ7Z5D8 188 aa1.59□□□□□ -2.15
USP9X-208ENST00000487625 ARHGAP22Q7Z5H3 698 aa1.59□□□□□ -2.15
USP9X-208ENST00000487625 LHFPL4Q7Z7J7 247 aa1.59□□□□□ -2.15
USP9X-208ENST00000487625 YRDCQ86U90 279 aaKnown RBP1.59□□□□□ -2.15
USP9X-208ENST00000487625 ZNF683Q8IZ20 524 aa1.59□□□□□ -2.15
USP9X-208ENST00000487625 C11orf42Q8N5U0 333 aa1.59□□□□□ -2.15
USP9X-208ENST00000487625 AKR7LQ8NHP1 331 aa1.59□□□□□ -2.15
USP9X-208ENST00000487625 RAPGEF5Q92565 580 aa1.59□□□□□ -2.15
USP9X-208ENST00000487625 PROX1Q92786 737 aa1.59□□□□□ -2.15
USP9X-208ENST00000487625 OSTF1Q92882 214 aa1.59□□□□□ -2.15
USP9X-208ENST00000487625 FAM46BQ96A09 425 aa1.59□□□□□ -2.15
USP9X-208ENST00000487625 CIDECQ96AQ7 238 aaPredicted RBP1.59□□□□□ -2.15
USP9X-208ENST00000487625 C7orf34Q96L11 122 aa1.59□□□□□ -2.15
USP9X-208ENST00000487625 TCEANC2Q96MN5 208 aa1.59□□□□□ -2.15
USP9X-208ENST00000487625 TTC25Q96NG3 672 aa1.59□□□□□ -2.15
USP9X-208ENST00000487625 ZIM3Q96PE6 472 aa1.59□□□□□ -2.15
USP9X-208ENST00000487625 JPH2Q9BR39 696 aaPredicted RBP1.59□□□□□ -2.15
USP9X-208ENST00000487625 SLC39A3Q9BRY0 314 aa1.59□□□□□ -2.15
USP9X-208ENST00000487625 NTMT1Q9BV86 223 aa1.59□□□□□ -2.15
USP9X-208ENST00000487625 CAPS2Q9BXY5 557 aa1.59□□□□□ -2.15
USP9X-208ENST00000487625 MRPL37Q9BZE1 423 aaKnown RBP1.59□□□□□ -2.15
USP9X-208ENST00000487625 GANQ9H2C0 597 aa1.59□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms