RNA–Protein interactions for RNA: ENST00000487615.5

TRA2B-214, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 4,485 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-214ENST00000487615 BNC1Q01954 994 aa11.13□□□□□ -0.63
TRA2B-214ENST00000487615 ANKRD34AQ69YU3 496 aa11.13□□□□□ -0.63
TRA2B-214ENST00000487615 CALHM3Q86XJ0 350 aa11.13□□□□□ -0.63
TRA2B-214ENST00000487615 AMDHD1Q96NU7 426 aa11.13□□□□□ -0.63
TRA2B-214ENST00000487615 NELL2Q99435 816 aa11.13□□□□□ -0.63
TRA2B-214ENST00000487615 CLEC4MQ9H2X3 399 aaPredicted RBP11.13□□□□□ -0.63
TRA2B-214ENST00000487615 MCUBQ9NWR8 336 aa11.13□□□□□ -0.63
TRA2B-214ENST00000487615 HCN3Q9P1Z3 774 aa11.13□□□□□ -0.63
TRA2B-214ENST00000487615 KIR2DS5A0A0G2JLQ3 304 aa11.13□□□□□ -0.63
TRA2B-214ENST00000487615 A0A0G2JNG1 304 aa11.13□□□□□ -0.63
TRA2B-214ENST00000487615 KIR2DS3K7RE56 304 aa11.13□□□□□ -0.63
TRA2B-214ENST00000487615 ORC5O43913 435 aa11.13□□□□□ -0.63
TRA2B-214ENST00000487615 CD40LGP29965 261 aa11.13□□□□□ -0.63
TRA2B-214ENST00000487615 KIR2DS5Q14953 304 aa11.13□□□□□ -0.63
TRA2B-214ENST00000487615 TOR1AIP2Q8NFQ8 470 aa11.13□□□□□ -0.63
TRA2B-214ENST00000487615 TBC1D15Q8TC07 691 aa11.13□□□□□ -0.63
TRA2B-214ENST00000487615 SHDQ96IW2 340 aa11.13□□□□□ -0.63
TRA2B-214ENST00000487615 NIPSNAP1Q9BPW8 284 aa11.13□□□□□ -0.63
TRA2B-214ENST00000487615 PSORS1C1Q9UIG5 152 aa11.13□□□□□ -0.63
TRA2B-214ENST00000487615 A0A0J9YY10 115 aa11.13□□□□□ -0.63
TRA2B-214ENST00000487615 A0A1B0GW55 424 aa11.13□□□□□ -0.63
TRA2B-214ENST00000487615 MAN2B1O00754 1011 aa11.13□□□□□ -0.63
TRA2B-214ENST00000487615 PRODHO43272 600 aa11.13□□□□□ -0.63
TRA2B-214ENST00000487615 DUX4L2P0CJ85 424 aa11.13□□□□□ -0.63
TRA2B-214ENST00000487615 DUX4L3P0CJ86 424 aa11.13□□□□□ -0.63
TRA2B-214ENST00000487615 DUX4L4P0CJ87 422 aa11.13□□□□□ -0.63
TRA2B-214ENST00000487615 DUX4L5P0CJ88 424 aa11.13□□□□□ -0.63
TRA2B-214ENST00000487615 DUX4L6P0CJ89 424 aa11.13□□□□□ -0.63
TRA2B-214ENST00000487615 DUX4L7P0CJ90 424 aa11.13□□□□□ -0.63
TRA2B-214ENST00000487615 GNSP15586 552 aa11.13□□□□□ -0.63
TRA2B-214ENST00000487615 PKLRP30613 574 aa11.13□□□□□ -0.63
TRA2B-214ENST00000487615 METAP1P53582 386 aa11.13□□□□□ -0.63
TRA2B-214ENST00000487615 MRPS21P82921 87 aaKnown RBP11.13□□□□□ -0.63
TRA2B-214ENST00000487615 NKG7Q16617 165 aa11.13□□□□□ -0.63
TRA2B-214ENST00000487615 ARHGAP40Q5TG30 622 aa11.13□□□□□ -0.63
TRA2B-214ENST00000487615 SLC29A4Q7RTT9 530 aa11.13□□□□□ -0.63
TRA2B-214ENST00000487615 NANOGNBQ7Z5D8 188 aa11.13□□□□□ -0.63
TRA2B-214ENST00000487615 ACOT11Q8WXI4 607 aaPredicted RBP11.13□□□□□ -0.63
TRA2B-214ENST00000487615 RIT1Q92963 219 aa11.13□□□□□ -0.63
TRA2B-214ENST00000487615 PMEPA1Q969W9 287 aa11.13□□□□□ -0.63
TRA2B-214ENST00000487615 PDXPQ96GD0 296 aa11.13□□□□□ -0.63
TRA2B-214ENST00000487615 ZDHHC12Q96GR4 267 aa11.13□□□□□ -0.63
TRA2B-214ENST00000487615 ZFP3Q96NJ6 502 aa11.13□□□□□ -0.63
TRA2B-214ENST00000487615 COMMD4Q9H0A8 199 aa11.13□□□□□ -0.63
TRA2B-214ENST00000487615 MRPL39Q9NYK5 338 aaKnown RBP11.13□□□□□ -0.63
TRA2B-214ENST00000487615 DUX4Q9UBX2 424 aa11.13□□□□□ -0.63
TRA2B-214ENST00000487615 IL20RAQ9UHF4 553 aa11.13□□□□□ -0.63
TRA2B-214ENST00000487615 ZNF222Q9UK12 451 aa11.13□□□□□ -0.63
TRA2B-214ENST00000487615 KCNE1BA0A087WTH5 132 aa11.12□□□□□ -0.63
TRA2B-214ENST00000487615 SLC22A31A6NKX4 558 aa11.12□□□□□ -0.63
TRA2B-214ENST00000487615 TACSTD2P09758 323 aa11.12□□□□□ -0.63
TRA2B-214ENST00000487615 CD22P20273 847 aa11.12□□□□□ -0.63
TRA2B-214ENST00000487615 GIPRP48546 466 aa11.12□□□□□ -0.63
TRA2B-214ENST00000487615 KCNJ10P78508 379 aa11.12□□□□□ -0.63
TRA2B-214ENST00000487615 TOMM20Q15388 145 aa11.12□□□□□ -0.63
TRA2B-214ENST00000487615 CTU2Q2VPK5 515 aaKnown RBP11.12□□□□□ -0.63
TRA2B-214ENST00000487615 ABHD17CQ6PCB6 329 aa11.12□□□□□ -0.63
TRA2B-214ENST00000487615 ZNF517Q6ZMY9 492 aaPredicted RBP11.12□□□□□ -0.63
TRA2B-214ENST00000487615 WDR53Q7Z5U6 358 aaPredicted RBP11.12□□□□□ -0.63
TRA2B-214ENST00000487615 PJA1Q8NG27 643 aa11.12□□□□□ -0.63
TRA2B-214ENST00000487615 ADAMTS16Q8TE57 1224 aa11.12□□□□□ -0.63
TRA2B-214ENST00000487615 ZDHHC1Q8WTX9 485 aa11.12□□□□□ -0.63
TRA2B-214ENST00000487615 TSEN15Q8WW01 171 aaKnown RBP11.12□□□□□ -0.63
TRA2B-214ENST00000487615 RPL3LQ92901 407 aaKnown RBP11.12□□□□□ -0.63
TRA2B-214ENST00000487615 CDS1Q92903 461 aa11.12□□□□□ -0.63
TRA2B-214ENST00000487615 PEX11GQ96HA9 241 aa11.12□□□□□ -0.63
TRA2B-214ENST00000487615 ERMAPQ96PL5 475 aaPredicted RBP11.12□□□□□ -0.63
TRA2B-214ENST00000487615 TRNT1Q96Q11 434 aaKnown RBP11.12□□□□□ -0.63
TRA2B-214ENST00000487615 PELOQ9BRX2 385 aaKnown RBP11.12□□□□□ -0.63
TRA2B-214ENST00000487615 GABARAPL1Q9H0R8 117 aa11.12□□□□□ -0.63
TRA2B-214ENST00000487615 TCF7L1Q9HCS4 588 aa11.12□□□□□ -0.63
TRA2B-214ENST00000487615 NKIRAS2Q9NYR9 191 aa11.12□□□□□ -0.63
TRA2B-214ENST00000487615 SLC23A2Q9UGH3 650 aa11.12□□□□□ -0.63
TRA2B-214ENST00000487615 ING4Q9UNL4 249 aa11.12□□□□□ -0.63
TRA2B-214ENST00000487615 BLOC1S5-TXNDC5H3BN57 136 aa11.12□□□□□ -0.63
TRA2B-214ENST00000487615 CPNE6O95741 557 aa11.12□□□□□ -0.63
TRA2B-214ENST00000487615 MRPL3P09001 348 aaKnown RBP11.12□□□□□ -0.63
TRA2B-214ENST00000487615 PSKH1P11801 424 aa11.12□□□□□ -0.63
TRA2B-214ENST00000487615 KCNJ5P48544 419 aa11.12□□□□□ -0.63
TRA2B-214ENST00000487615 WNT4P56705 351 aa11.12□□□□□ -0.63
TRA2B-214ENST00000487615 NRG3P56975 720 aa11.12□□□□□ -0.63
TRA2B-214ENST00000487615 DUSP7Q16829 419 aa11.12□□□□□ -0.63
TRA2B-214ENST00000487615 TMEM179BQ7Z7N9 219 aa11.12□□□□□ -0.63
TRA2B-214ENST00000487615 PROKR2Q8NFJ6 384 aa11.12□□□□□ -0.63
TRA2B-214ENST00000487615 FAM210AQ96ND0 272 aa11.12□□□□□ -0.63
TRA2B-214ENST00000487615 CRISPLD2Q9H0B8 497 aa11.12□□□□□ -0.63
TRA2B-214ENST00000487615 LTB4R2Q9NPC1 389 aa11.12□□□□□ -0.63
TRA2B-214ENST00000487615 CPNE7Q9UBL6 633 aa11.12□□□□□ -0.63
TRA2B-214ENST00000487615 CKLFQ9UBR5 152 aa11.12□□□□□ -0.63
TRA2B-214ENST00000487615 ZBTB32Q9Y2Y4 487 aaPredicted RBP11.12□□□□□ -0.63
TRA2B-214ENST00000487615 A8MU76 341 aa11.12□□□□□ -0.63
TRA2B-214ENST00000487615 PVRP15151 417 aa11.12□□□□□ -0.63
TRA2B-214ENST00000487615 BCL6P41182 706 aa11.12□□□□□ -0.63
TRA2B-214ENST00000487615 SLC35A2P78381 396 aa11.12□□□□□ -0.63
TRA2B-214ENST00000487615 CHRNEQ04844 493 aa11.12□□□□□ -0.63
TRA2B-214ENST00000487615 CRYZQ08257 329 aaKnown RBP11.12□□□□□ -0.63
TRA2B-214ENST00000487615 MAP4K2Q12851 820 aa11.12□□□□□ -0.63
TRA2B-214ENST00000487615 ANKRD54Q6NXT1 300 aa11.12□□□□□ -0.63
TRA2B-214ENST00000487615 SCAIQ8N9R8 606 aa11.12□□□□□ -0.63
TRA2B-214ENST00000487615 RHOXF1Q8NHV9 184 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms