RNA–Protein interactions for RNA: ENST00000487481.1

NME1-208, Transcript of NME/NM23 nucleoside diphosphate kinase 1, humanhuman

TSL 2

Gene NME1, Length 987 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME1-208ENST00000487481 ALPK2Q86TB3 2170 aa13.65□□□□□ -0.22
NME1-208ENST00000487481 IGHV4-30-2A0A087WSY4 118 aa13.64□□□□□ -0.23
NME1-208ENST00000487481 H0YC42 278 aa13.64□□□□□ -0.23
NME1-208ENST00000487481 LINC01387J3KSC0 135 aa13.64□□□□□ -0.23
NME1-208ENST00000487481 SEC14L5O43304 696 aa13.64□□□□□ -0.23
NME1-208ENST00000487481 CD1DP15813 335 aa13.64□□□□□ -0.23
NME1-208ENST00000487481 PORP16435 677 aaPredicted RBP13.64□□□□□ -0.23
NME1-208ENST00000487481 DRD5P21918 477 aa13.64□□□□□ -0.23
NME1-208ENST00000487481 ELK3P41970 407 aa13.64□□□□□ -0.23
NME1-208ENST00000487481 PPICP45877 212 aa13.64□□□□□ -0.23
NME1-208ENST00000487481 SUCLG1P53597 346 aaKnown RBP13.64□□□□□ -0.23
NME1-208ENST00000487481 TPD52P55327 224 aaPredicted RBP13.64□□□□□ -0.23
NME1-208ENST00000487481 ATP6V0D1P61421 351 aa13.64□□□□□ -0.23
NME1-208ENST00000487481 MGAT5Q09328 741 aa13.64□□□□□ -0.23
NME1-208ENST00000487481 CUL3Q13618 768 aa13.64□□□□□ -0.23
NME1-208ENST00000487481 PRICKLE4Q2TBC4 344 aa13.64□□□□□ -0.23
NME1-208ENST00000487481 RAET1LQ5VY80 246 aa13.64□□□□□ -0.23
NME1-208ENST00000487481 ADCY4Q8NFM4 1077 aa13.64□□□□□ -0.23
NME1-208ENST00000487481 OR4K17Q8NGC6 315 aa13.64□□□□□ -0.23
NME1-208ENST00000487481 GFM2Q969S9 779 aaKnown RBP13.64□□□□□ -0.23
NME1-208ENST00000487481 TMBIM1Q969X1 311 aa13.64□□□□□ -0.23
NME1-208ENST00000487481 SLC35A4Q96G79 324 aa13.64□□□□□ -0.23
NME1-208ENST00000487481 TNFRSF13CQ96RJ3 184 aa13.64□□□□□ -0.23
NME1-208ENST00000487481 LRRC1Q9BTT6 524 aa13.64□□□□□ -0.23
NME1-208ENST00000487481 BRINP2Q9C0B6 783 aa13.64□□□□□ -0.23
NME1-208ENST00000487481 WHRNQ9P202 907 aa13.64□□□□□ -0.23
NME1-208ENST00000487481 OPTCQ9UBM4 332 aa13.64□□□□□ -0.23
NME1-208ENST00000487481 GPR52Q9Y2T5 361 aa13.64□□□□□ -0.23
NME1-208ENST00000487481 PLLPQ9Y342 182 aa13.64□□□□□ -0.23
NME1-208ENST00000487481 PCDHGA11Q9Y5H2 935 aa13.64□□□□□ -0.23
NME1-208ENST00000487481 B4DXG7 233 aa13.63□□□□□ -0.23
NME1-208ENST00000487481 K7EPI3 171 aa13.63□□□□□ -0.23
NME1-208ENST00000487481 DNALI1O14645 258 aaPredicted RBP13.63□□□□□ -0.23
NME1-208ENST00000487481 CLOCKO15516 846 aa13.63□□□□□ -0.23
NME1-208ENST00000487481 NDUFS7O75251 213 aa13.63□□□□□ -0.23
NME1-208ENST00000487481 AQP8O94778 261 aa13.63□□□□□ -0.23
NME1-208ENST00000487481 CCDC166P0CW27 439 aa13.63□□□□□ -0.23
NME1-208ENST00000487481 SRD5A1P18405 259 aa13.63□□□□□ -0.23
NME1-208ENST00000487481 PSMB1P20618 241 aaKnown RBP13.63□□□□□ -0.23
NME1-208ENST00000487481 DEKP35659 375 aaKnown RBP13.63□□□□□ -0.23
NME1-208ENST00000487481 RPS3AP61247 264 aaKnown RBP13.63□□□□□ -0.23
NME1-208ENST00000487481 POU4F1Q01851 419 aa13.63□□□□□ -0.23
NME1-208ENST00000487481 ZNF844Q08AG5 666 aa13.63□□□□□ -0.23
NME1-208ENST00000487481 MAP4K2Q12851 820 aa13.63□□□□□ -0.23
NME1-208ENST00000487481 FAPQ12884 760 aa13.63□□□□□ -0.23
NME1-208ENST00000487481 ILF2Q12905 390 aaKnown RBP13.63□□□□□ -0.23
NME1-208ENST00000487481 EFR3AQ14156 821 aa13.63□□□□□ -0.23
NME1-208ENST00000487481 EXOSC7Q15024 291 aaKnown RBP13.63□□□□□ -0.23
NME1-208ENST00000487481 NRF1Q16656 503 aa13.63□□□□□ -0.23
NME1-208ENST00000487481 ZNF672Q499Z4 452 aaPredicted RBP13.63□□□□□ -0.23
NME1-208ENST00000487481 HP1BP3Q5SSJ5 553 aaPredicted RBP13.63□□□□□ -0.23
NME1-208ENST00000487481 DNAJC14Q6Y2X3 702 aaPredicted RBP13.63□□□□□ -0.23
NME1-208ENST00000487481 BEND4Q6ZU67 534 aa13.63□□□□□ -0.23
NME1-208ENST00000487481 MYLK4Q86YV6 388 aaPredicted RBP13.63□□□□□ -0.23
NME1-208ENST00000487481 PDIK1LQ8N165 341 aa13.63□□□□□ -0.23
NME1-208ENST00000487481 METTL25Q8N6Q8 603 aa13.63□□□□□ -0.23
NME1-208ENST00000487481 UBTD2Q8WUN7 234 aa13.63□□□□□ -0.23
NME1-208ENST00000487481 RNF138Q8WVD3 245 aa13.63□□□□□ -0.23
NME1-208ENST00000487481 EXT2Q93063 718 aa13.63□□□□□ -0.23
NME1-208ENST00000487481 C11orf24Q96F05 449 aaPredicted RBP13.63□□□□□ -0.23
NME1-208ENST00000487481 ALG2Q9H553 416 aa13.63□□□□□ -0.23
NME1-208ENST00000487481 MAT2BQ9NZL9 334 aa13.63□□□□□ -0.23
NME1-208ENST00000487481 PRODH2Q9UF12 536 aa13.63□□□□□ -0.23
NME1-208ENST00000487481 ZNF639Q9UID6 485 aa13.63□□□□□ -0.23
NME1-208ENST00000487481 GDF2Q9UK05 429 aaPredicted RBP13.63□□□□□ -0.23
NME1-208ENST00000487481 MALRD1Q5VYJ5 2156 aa13.63□□□□□ -0.23
NME1-208ENST00000487481 DLX3O60479 287 aa13.62□□□□□ -0.23
NME1-208ENST00000487481 REM1O75628 298 aa13.62□□□□□ -0.23
NME1-208ENST00000487481 CBX7O95931 251 aa13.62□□□□□ -0.23
NME1-208ENST00000487481 GBAP04062 536 aa13.62□□□□□ -0.23
NME1-208ENST00000487481 ATP1B1P05026 303 aa13.62□□□□□ -0.23
NME1-208ENST00000487481 FESP07332 822 aa13.62□□□□□ -0.23
NME1-208ENST00000487481 CD3EP07766 207 aa13.62□□□□□ -0.23
NME1-208ENST00000487481 IL11P20809 199 aa13.62□□□□□ -0.23
NME1-208ENST00000487481 FNTAP49354 379 aa13.62□□□□□ -0.23
NME1-208ENST00000487481 CTBP2P56545 445 aa13.62□□□□□ -0.23
NME1-208ENST00000487481 SRSF2Q01130 221 aaKnown RBP13.62□□□□□ -0.23
NME1-208ENST00000487481 LOXL1Q08397 574 aaPredicted RBP13.62□□□□□ -0.23
NME1-208ENST00000487481 MGAT2Q10469 447 aa13.62□□□□□ -0.23
NME1-208ENST00000487481 GANABQ14697 944 aaKnown RBP13.62□□□□□ -0.23
NME1-208ENST00000487481 PPP1R7Q15435 360 aa13.62□□□□□ -0.23
NME1-208ENST00000487481 PGGHGQ32M88 737 aa13.62□□□□□ -0.23
NME1-208ENST00000487481 NCMAPQ5T1S8 102 aa13.62□□□□□ -0.23
NME1-208ENST00000487481 FAM111BQ6SJ93 734 aa13.62□□□□□ -0.23
NME1-208ENST00000487481 STK32CQ86UX6 486 aa13.62□□□□□ -0.23
NME1-208ENST00000487481 FADS6Q8N9I5 356 aa13.62□□□□□ -0.23
NME1-208ENST00000487481 TRIM58Q8NG06 486 aa13.62□□□□□ -0.23
NME1-208ENST00000487481 LRRC39Q96DD0 335 aa13.62□□□□□ -0.23
NME1-208ENST00000487481 TSPAN17Q96FV3 270 aa13.62□□□□□ -0.23
NME1-208ENST00000487481 GMPPAQ96IJ6 420 aaPredicted RBP13.62□□□□□ -0.23
NME1-208ENST00000487481 ADOQ96SZ5 270 aa13.62□□□□□ -0.23
NME1-208ENST00000487481 MCMBPQ9BTE3 642 aa13.62□□□□□ -0.23
NME1-208ENST00000487481 TRAF4Q9BUZ4 470 aaPredicted RBP13.62□□□□□ -0.23
NME1-208ENST00000487481 NTMT1Q9BV86 223 aa13.62□□□□□ -0.23
NME1-208ENST00000487481 GRIP2Q9C0E4 1043 aa13.62□□□□□ -0.23
NME1-208ENST00000487481 ESRP2Q9H6T0 727 aaKnown RBP13.62□□□□□ -0.23
NME1-208ENST00000487481 NGBQ9NPG2 151 aa13.62□□□□□ -0.23
NME1-208ENST00000487481 NSMCE4AQ9NXX6 385 aa13.62□□□□□ -0.23
NME1-208ENST00000487481 NUDT4Q9NZJ9 180 aa13.62□□□□□ -0.23
NME1-208ENST00000487481 ASIC3Q9UHC3 531 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms