RNA–Protein interactions for RNA: ENST00000487029.1

SNRNP27-204, Transcript of small nuclear ribonucleoprotein U4/U6.U5 subunit 27, humanhuman

TSL 3

Gene SNRNP27, Length 604 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP27-204ENST00000487029 IGHV3OR16-12A0A075B7B8 117 aa2.78□□□□□ -1.96
SNRNP27-204ENST00000487029 TTC26A0AVF1 554 aa2.78□□□□□ -1.96
SNRNP27-204ENST00000487029 RNF222A6NCQ9 220 aa2.78□□□□□ -1.96
SNRNP27-204ENST00000487029 MFSD2BA6NFX1 497 aa2.78□□□□□ -1.96
SNRNP27-204ENST00000487029 FBLL1A6NHQ2 334 aaKnown RBP2.78□□□□□ -1.96
SNRNP27-204ENST00000487029 ANKRD30BLA7E2S9 258 aa2.78□□□□□ -1.96
SNRNP27-204ENST00000487029 ZNF487B1APH4 448 aa2.78□□□□□ -1.96
SNRNP27-204ENST00000487029 E2F3O00716 465 aa2.78□□□□□ -1.96
SNRNP27-204ENST00000487029 TYROBPO43914 113 aa2.78□□□□□ -1.96
SNRNP27-204ENST00000487029 VPS26AO75436 327 aa2.78□□□□□ -1.96
SNRNP27-204ENST00000487029 SCGB2A1O75556 95 aa2.78□□□□□ -1.96
SNRNP27-204ENST00000487029 TOXO94900 526 aa2.78□□□□□ -1.96
SNRNP27-204ENST00000487029 APBB3O95704 486 aa2.78□□□□□ -1.96
SNRNP27-204ENST00000487029 IGHG3P01860 377 aa2.78□□□□□ -1.96
SNRNP27-204ENST00000487029 CAPN2P17655 700 aa2.78□□□□□ -1.96
SNRNP27-204ENST00000487029 ELK3P41970 407 aa2.78□□□□□ -1.96
SNRNP27-204ENST00000487029 ARHGDIAP52565 204 aa2.78□□□□□ -1.96
SNRNP27-204ENST00000487029 POLR2FP61218 127 aaKnown RBP2.78□□□□□ -1.96
SNRNP27-204ENST00000487029 PRKCEQ02156 737 aa2.78□□□□□ -1.96
SNRNP27-204ENST00000487029 HSF2Q03933 536 aa2.78□□□□□ -1.96
SNRNP27-204ENST00000487029 ZP4Q12836 540 aa2.78□□□□□ -1.96
SNRNP27-204ENST00000487029 EIF2B1Q14232 305 aaKnown RBP2.78□□□□□ -1.96
SNRNP27-204ENST00000487029 ADPRMQ3LIE5 342 aa2.78□□□□□ -1.96
SNRNP27-204ENST00000487029 HSP90AA5PQ58FG0 334 aa2.78□□□□□ -1.96
SNRNP27-204ENST00000487029 NHLRC3Q5JS37 347 aa2.78□□□□□ -1.96
SNRNP27-204ENST00000487029 BEND6Q5SZJ8 279 aaPredicted RBP2.78□□□□□ -1.96
SNRNP27-204ENST00000487029 SEL1L2Q5TEA6 688 aa2.78□□□□□ -1.96
SNRNP27-204ENST00000487029 DMKNQ6E0U4 476 aaPredicted RBP2.78□□□□□ -1.96
SNRNP27-204ENST00000487029 REG3GQ6UW15 175 aa2.78□□□□□ -1.96
SNRNP27-204ENST00000487029 ZNF562Q6V9R5 426 aa2.78□□□□□ -1.96
SNRNP27-204ENST00000487029 NET1Q7Z628 596 aaPredicted RBP2.78□□□□□ -1.96
SNRNP27-204ENST00000487029 TSEN54Q7Z6J9 526 aaKnown RBP2.78□□□□□ -1.96
SNRNP27-204ENST00000487029 FGFRL1Q8N441 504 aa2.78□□□□□ -1.96
SNRNP27-204ENST00000487029 OR2L2Q8NH16 312 aa2.78□□□□□ -1.96
SNRNP27-204ENST00000487029 GIPC3Q8TF64 312 aa2.78□□□□□ -1.96
SNRNP27-204ENST00000487029 ITLN1Q8WWA0 313 aa2.78□□□□□ -1.96
SNRNP27-204ENST00000487029 SELENOMQ8WWX9 145 aa2.78□□□□□ -1.96
SNRNP27-204ENST00000487029 CRYGNQ8WXF5 182 aa2.78□□□□□ -1.96
SNRNP27-204ENST00000487029 C16orf45Q96MC5 204 aaPredicted RBP2.78□□□□□ -1.96
SNRNP27-204ENST00000487029 FICDQ9BVA6 458 aa2.78□□□□□ -1.96
SNRNP27-204ENST00000487029 DPH5Q9H2P9 285 aa2.78□□□□□ -1.96
SNRNP27-204ENST00000487029 PNNQ9H307 717 aaKnown RBP2.78□□□□□ -1.96
SNRNP27-204ENST00000487029 RPAP3Q9H6T3 665 aaPredicted RBP2.78□□□□□ -1.96
SNRNP27-204ENST00000487029 KAT8Q9H7Z6 458 aaKnown RBP2.78□□□□□ -1.96
SNRNP27-204ENST00000487029 TRPV5Q9NQA5 729 aa2.78□□□□□ -1.96
SNRNP27-204ENST00000487029 DCAF13Q9NV06 445 aaKnown RBP2.78□□□□□ -1.96
SNRNP27-204ENST00000487029 KLRF1Q9NZS2 232 aa2.78□□□□□ -1.96
SNRNP27-204ENST00000487029 RAI14Q9P0K7 980 aa2.78□□□□□ -1.96
SNRNP27-204ENST00000487029 FOXJ3Q9UPW0 622 aa2.78□□□□□ -1.96
SNRNP27-204ENST00000487029 RNF24Q9Y225 148 aa2.78□□□□□ -1.96
SNRNP27-204ENST00000487029 U3KQV3 271 aa2.78□□□□□ -1.96
SNRNP27-204ENST00000487029 PCNX3Q9H6A9 2034 aa2.77□□□□□ -1.97
SNRNP27-204ENST00000487029 A0A087WZY1 265 aa2.77□□□□□ -1.97
SNRNP27-204ENST00000487029 A0A0U1RQV5 110 aa2.77□□□□□ -1.97
SNRNP27-204ENST00000487029 TRABD2BA6NFA1 517 aa2.77□□□□□ -1.97
SNRNP27-204ENST00000487029 C11orf98E9PRG8 122 aa2.77□□□□□ -1.97
SNRNP27-204ENST00000487029 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP2.77□□□□□ -1.97
SNRNP27-204ENST00000487029 IMPA2O14732 288 aa2.77□□□□□ -1.97
SNRNP27-204ENST00000487029 ALOX15BO15296 676 aa2.77□□□□□ -1.97
SNRNP27-204ENST00000487029 CHADO15335 359 aa2.77□□□□□ -1.97
SNRNP27-204ENST00000487029 CLDN3O15551 220 aa2.77□□□□□ -1.97
SNRNP27-204ENST00000487029 SDC3O75056 442 aa2.77□□□□□ -1.97
SNRNP27-204ENST00000487029 IGHV3-9P01782 118 aa2.77□□□□□ -1.97
SNRNP27-204ENST00000487029 CA3P07451 260 aa2.77□□□□□ -1.97
SNRNP27-204ENST00000487029 ANXA4P09525 319 aaPredicted RBP2.77□□□□□ -1.97
SNRNP27-204ENST00000487029 GATA1P15976 413 aaPredicted RBP2.77□□□□□ -1.97
SNRNP27-204ENST00000487029 ACADSP16219 412 aa2.77□□□□□ -1.97
SNRNP27-204ENST00000487029 DESP17661 470 aa2.77□□□□□ -1.97
SNRNP27-204ENST00000487029 TSPAN8P19075 237 aa2.77□□□□□ -1.97
SNRNP27-204ENST00000487029 PTMSP20962 102 aa2.77□□□□□ -1.97
SNRNP27-204ENST00000487029 DPP4P27487 766 aa2.77□□□□□ -1.97
SNRNP27-204ENST00000487029 BRCC3P46736 316 aa2.77□□□□□ -1.97
SNRNP27-204ENST00000487029 HTR5AP47898 357 aa2.77□□□□□ -1.97
SNRNP27-204ENST00000487029 SLC8A3P57103 927 aa2.77□□□□□ -1.97
SNRNP27-204ENST00000487029 KRTAP10-1P60331 282 aa2.77□□□□□ -1.97
SNRNP27-204ENST00000487029 ZNF33BQ06732 778 aa2.77□□□□□ -1.97
SNRNP27-204ENST00000487029 ZFP36L1Q07352 338 aaKnown RBP2.77□□□□□ -1.97
SNRNP27-204ENST00000487029 RFTN1Q14699 578 aaPredicted RBP2.77□□□□□ -1.97
SNRNP27-204ENST00000487029 ABRAXAS2Q15018 415 aa2.77□□□□□ -1.97
SNRNP27-204ENST00000487029 ZNF239Q16600 458 aaKnown RBP2.77□□□□□ -1.97
SNRNP27-204ENST00000487029 MS4A13Q5J8X5 152 aa2.77□□□□□ -1.97
SNRNP27-204ENST00000487029 LCE1CQ5T751 118 aa2.77□□□□□ -1.97
SNRNP27-204ENST00000487029 LCE1BQ5T7P3 118 aa2.77□□□□□ -1.97
SNRNP27-204ENST00000487029 PRR5LQ6MZQ0 368 aa2.77□□□□□ -1.97
SNRNP27-204ENST00000487029 CCDC36Q8IYA8 594 aa2.77□□□□□ -1.97
SNRNP27-204ENST00000487029 SUMF1Q8NBK3 374 aa2.77□□□□□ -1.97
SNRNP27-204ENST00000487029 ZBTB44Q8NCP5 570 aa2.77□□□□□ -1.97
SNRNP27-204ENST00000487029 NFAM1Q8NET5 270 aaPredicted RBP2.77□□□□□ -1.97
SNRNP27-204ENST00000487029 TBCKQ8TEA7 893 aa2.77□□□□□ -1.97
SNRNP27-204ENST00000487029 FAM222BQ8WU58 562 aa2.77□□□□□ -1.97
SNRNP27-204ENST00000487029 CARD6Q9BX69 1037 aa2.77□□□□□ -1.97
SNRNP27-204ENST00000487029 PUS3Q9BZE2 481 aaKnown RBP2.77□□□□□ -1.97
SNRNP27-204ENST00000487029 ZBP1Q9H171 429 aa2.77□□□□□ -1.97
SNRNP27-204ENST00000487029 LIN28AQ9H9Z2 209 aaKnown RBP2.77□□□□□ -1.97
SNRNP27-204ENST00000487029 SLC7A10Q9NS82 523 aa2.77□□□□□ -1.97
SNRNP27-204ENST00000487029 DUS2Q9NX74 493 aaKnown RBP2.77□□□□□ -1.97
SNRNP27-204ENST00000487029 RCOR3Q9P2K3 495 aaPredicted RBP2.77□□□□□ -1.97
SNRNP27-204ENST00000487029 EPS15L1Q9UBC2 864 aa2.77□□□□□ -1.97
SNRNP27-204ENST00000487029 GHRLQ9UBU3 117 aa2.77□□□□□ -1.97
SNRNP27-204ENST00000487029 ATP6V1HQ9UI12 483 aa2.77□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms