RNA–Protein interactions for RNA: ENST00000486641.2

CCDC171-208, Transcript of coiled-coil domain containing 171, humanhuman

TSL 1 (best)

Gene CCDC171, Length 2,322 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-208ENST00000486641 ATOH1Q92858 354 aaPredicted RBP10.04□□□□□ -0.8
CCDC171-208ENST00000486641 LDHAL6BQ9BYZ2 381 aaPredicted RBP10.04□□□□□ -0.8
CCDC171-208ENST00000486641 ZCCHC4Q9H5U6 513 aa10.04□□□□□ -0.8
CCDC171-208ENST00000486641 EGLN3Q9H6Z9 239 aa10.04□□□□□ -0.8
CCDC171-208ENST00000486641 BRF2Q9HAW0 419 aa10.04□□□□□ -0.8
CCDC171-208ENST00000486641 HPF1Q9NWY4 346 aa10.04□□□□□ -0.8
CCDC171-208ENST00000486641 CKAP5Q14008 2032 aa10.03□□□□□ -0.8
CCDC171-208ENST00000486641 GFYI3L273 518 aa10.03□□□□□ -0.8
CCDC171-208ENST00000486641 LINC01387J3KSC0 135 aa10.03□□□□□ -0.8
CCDC171-208ENST00000486641 PDCD5O14737 125 aa10.03□□□□□ -0.8
CCDC171-208ENST00000486641 CLDN11O75508 207 aa10.03□□□□□ -0.8
CCDC171-208ENST00000486641 MT-ND4P03905 459 aa10.03□□□□□ -0.8
CCDC171-208ENST00000486641 SRPRAP08240 638 aaKnown RBP10.03□□□□□ -0.8
CCDC171-208ENST00000486641 CTSHP09668 335 aa10.03□□□□□ -0.8
CCDC171-208ENST00000486641 FURINP09958 794 aa10.03□□□□□ -0.8
CCDC171-208ENST00000486641 PEPDP12955 493 aa10.03□□□□□ -0.8
CCDC171-208ENST00000486641 RHOAP61586 193 aa10.03□□□□□ -0.8
CCDC171-208ENST00000486641 RPS7P62081 194 aaKnown RBP10.03□□□□□ -0.8
CCDC171-208ENST00000486641 GPR33Q49SQ1 333 aa10.03□□□□□ -0.8
CCDC171-208ENST00000486641 IER5LQ5T953 404 aa10.03□□□□□ -0.8
CCDC171-208ENST00000486641 PYHIN1Q6K0P9 492 aa10.03□□□□□ -0.8
CCDC171-208ENST00000486641 FAM198BQ6UWH4 519 aa10.03□□□□□ -0.8
CCDC171-208ENST00000486641 SEZ6L2Q6UXD5 910 aa10.03□□□□□ -0.8
CCDC171-208ENST00000486641 MRPL10Q7Z7H8 261 aaKnown RBP10.03□□□□□ -0.8
CCDC171-208ENST00000486641 ZNF467Q7Z7K2 595 aaPredicted RBP10.03□□□□□ -0.8
CCDC171-208ENST00000486641 KLBQ86Z14 1044 aa10.03□□□□□ -0.8
CCDC171-208ENST00000486641 FBXO15Q8NCQ5 510 aaPredicted RBP10.03□□□□□ -0.8
CCDC171-208ENST00000486641 GPR26Q8NDV2 337 aa10.03□□□□□ -0.8
CCDC171-208ENST00000486641 BVESQ8NE79 360 aa10.03□□□□□ -0.8
CCDC171-208ENST00000486641 GPRC5AQ8NFJ5 357 aa10.03□□□□□ -0.8
CCDC171-208ENST00000486641 YIPF5Q969M3 257 aa10.03□□□□□ -0.8
CCDC171-208ENST00000486641 PPCDCQ96CD2 204 aa10.03□□□□□ -0.8
CCDC171-208ENST00000486641 DMRTA2Q96SC8 542 aa10.03□□□□□ -0.8
CCDC171-208ENST00000486641 ZNF649Q9BS31 505 aa10.03□□□□□ -0.8
CCDC171-208ENST00000486641 DPH7Q9BTV6 452 aa10.03□□□□□ -0.8
CCDC171-208ENST00000486641 SERHL2Q9H4I8 314 aa10.03□□□□□ -0.8
CCDC171-208ENST00000486641 ASB6Q9NWX5 421 aa10.03□□□□□ -0.8
CCDC171-208ENST00000486641 PIM2Q9P1W9 311 aa10.03□□□□□ -0.8
CCDC171-208ENST00000486641 PTGFRNQ9P2B2 879 aa10.03□□□□□ -0.8
CCDC171-208ENST00000486641 RASD1Q9Y272 281 aa10.03□□□□□ -0.8
CCDC171-208ENST00000486641 MRPS7Q9Y2R9 242 aaKnown RBP10.03□□□□□ -0.8
CCDC171-208ENST00000486641 A0A1W2PRB8 838 aa10.02□□□□□ -0.8
CCDC171-208ENST00000486641 PLSCR5A0PG75 271 aa10.02□□□□□ -0.8
CCDC171-208ENST00000486641 C5orf58C9J3I9 102 aa10.02□□□□□ -0.8
CCDC171-208ENST00000486641 SAP18O00422 153 aaKnown RBP10.02□□□□□ -0.8
CCDC171-208ENST00000486641 INPPL1O15357 1258 aa10.02□□□□□ -0.8
CCDC171-208ENST00000486641 EFCAB14O75071 495 aa10.02□□□□□ -0.8
CCDC171-208ENST00000486641 FZD7O75084 574 aa10.02□□□□□ -0.8
CCDC171-208ENST00000486641 LDOC1O95751 146 aaPredicted RBP10.02□□□□□ -0.8
CCDC171-208ENST00000486641 HOXB1P14653 301 aaPredicted RBP10.02□□□□□ -0.8
CCDC171-208ENST00000486641 HSD3B2P26439 372 aa10.02□□□□□ -0.8
CCDC171-208ENST00000486641 SHC1P29353 583 aa10.02□□□□□ -0.8
CCDC171-208ENST00000486641 GKP32189 559 aa10.02□□□□□ -0.8
CCDC171-208ENST00000486641 SPAM1P38567 509 aa10.02□□□□□ -0.8
CCDC171-208ENST00000486641 MTNR1BP49286 362 aa10.02□□□□□ -0.8
CCDC171-208ENST00000486641 RAG2P55895 527 aa10.02□□□□□ -0.8
CCDC171-208ENST00000486641 OR10A3P58181 314 aa10.02□□□□□ -0.8
CCDC171-208ENST00000486641 MRPS6P82932 125 aaKnown RBP10.02□□□□□ -0.8
CCDC171-208ENST00000486641 DGCR2P98153 550 aa10.02□□□□□ -0.8
CCDC171-208ENST00000486641 BEX3Q00994 111 aa10.02□□□□□ -0.8
CCDC171-208ENST00000486641 GNA13Q14344 377 aa10.02□□□□□ -0.8
CCDC171-208ENST00000486641 HACD4Q5VWC8 232 aa10.02□□□□□ -0.8
CCDC171-208ENST00000486641 GRHL2Q6ISB3 625 aa10.02□□□□□ -0.8
CCDC171-208ENST00000486641 TNFAIP8L2Q6P589 184 aaPredicted RBP10.02□□□□□ -0.8
CCDC171-208ENST00000486641 ALKAL2Q6UX46 152 aa10.02□□□□□ -0.8
CCDC171-208ENST00000486641 CD300LDQ6UXZ3 194 aa10.02□□□□□ -0.8
CCDC171-208ENST00000486641 Q6ZTK2 550 aa10.02□□□□□ -0.8
CCDC171-208ENST00000486641 DGLUCYQ7Z3D6 616 aa10.02□□□□□ -0.8
CCDC171-208ENST00000486641 IQCHQ86VS3 1027 aa10.02□□□□□ -0.8
CCDC171-208ENST00000486641 HORMAD2Q8N7B1 307 aa10.02□□□□□ -0.8
CCDC171-208ENST00000486641 CLRN3Q8NCR9 226 aa10.02□□□□□ -0.8
CCDC171-208ENST00000486641 SLAIN1Q8ND83 568 aa10.02□□□□□ -0.8
CCDC171-208ENST00000486641 RPLP0P6Q8NHW5 317 aa10.02□□□□□ -0.8
CCDC171-208ENST00000486641 CXorf40BQ96DE9 158 aa10.02□□□□□ -0.8
CCDC171-208ENST00000486641 ELMOD3Q96FG2 381 aa10.02□□□□□ -0.8
CCDC171-208ENST00000486641 TINF2Q9BSI4 451 aa10.02□□□□□ -0.8
CCDC171-208ENST00000486641 TM6SF2Q9BZW4 377 aa10.02□□□□□ -0.8
CCDC171-208ENST00000486641 NKIRAS2Q9NYR9 191 aa10.02□□□□□ -0.8
CCDC171-208ENST00000486641 COPZ2Q9P299 210 aa10.02□□□□□ -0.8
CCDC171-208ENST00000486641 PFDN2Q9UHV9 154 aa10.02□□□□□ -0.8
CCDC171-208ENST00000486641 ING1Q9UK53 422 aaPredicted RBP10.02□□□□□ -0.8
CCDC171-208ENST00000486641 PCDHB8Q9UN66 801 aa10.02□□□□□ -0.8
CCDC171-208ENST00000486641 A4GNTQ9UNA3 340 aa10.02□□□□□ -0.8
CCDC171-208ENST00000486641 L7N2F9 121 aa10.02□□□□□ -0.81
CCDC171-208ENST00000486641 SLC28A2O43868 658 aa10.02□□□□□ -0.81
CCDC171-208ENST00000486641 NFATC1O95644 943 aa10.02□□□□□ -0.81
CCDC171-208ENST00000486641 TFP02787 698 aa10.02□□□□□ -0.81
CCDC171-208ENST00000486641 ATP5A1P25705 553 aaKnown RBP10.02□□□□□ -0.81
CCDC171-208ENST00000486641 VIPR1P32241 457 aa10.02□□□□□ -0.81
CCDC171-208ENST00000486641 EPHA4P54764 986 aa10.02□□□□□ -0.81
CCDC171-208ENST00000486641 FLI1Q01543 452 aaPredicted RBP10.02□□□□□ -0.81
CCDC171-208ENST00000486641 ZNF763Q0D2J5 394 aa10.02□□□□□ -0.81
CCDC171-208ENST00000486641 FZD5Q13467 585 aa10.02□□□□□ -0.81
CCDC171-208ENST00000486641 KIAA1211LQ6NV74 962 aa10.02□□□□□ -0.81
CCDC171-208ENST00000486641 TSPAN33Q86UF1 283 aa10.02□□□□□ -0.81
CCDC171-208ENST00000486641 LURAP1LQ8IV03 231 aa10.02□□□□□ -0.81
CCDC171-208ENST00000486641 KLHL36Q8N4N3 616 aa10.02□□□□□ -0.81
CCDC171-208ENST00000486641 LINC00469Q8N7U9 141 aa10.02□□□□□ -0.81
CCDC171-208ENST00000486641 OR4K5Q8NGD3 323 aa10.02□□□□□ -0.81
CCDC171-208ENST00000486641 MED8Q96G25 268 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms