RNA–Protein interactions for RNA: ENST00000486255.1

GABRE-209, Transcript of gamma-aminobutyric acid type A receptor epsilon subunit, humanhuman

TSL 1 (best)

Gene GABRE, Length 6,176 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRE-209ENST00000486255 NTN4Q9HB63 628 aa8.35□□□□□ -1.07
GABRE-209ENST00000486255 ZNF286AQ9HBT8 521 aa8.35□□□□□ -1.07
GABRE-209ENST00000486255 TESQ9UGI8 421 aaKnown RBP8.35□□□□□ -1.07
GABRE-209ENST00000486255 MAGEB4O15481 346 aaPredicted RBP8.35□□□□□ -1.07
GABRE-209ENST00000486255 B4GALT2O60909 372 aa8.35□□□□□ -1.07
GABRE-209ENST00000486255 CAPNS1P04632 268 aa8.35□□□□□ -1.07
GABRE-209ENST00000486255 PPP3CBP16298 524 aa8.35□□□□□ -1.07
GABRE-209ENST00000486255 GGT1P19440 569 aa8.35□□□□□ -1.07
GABRE-209ENST00000486255 GDF5P43026 501 aa8.35□□□□□ -1.07
GABRE-209ENST00000486255 ECH1Q13011 328 aa8.35□□□□□ -1.07
GABRE-209ENST00000486255 ZNF169Q14929 603 aaPredicted RBP8.35□□□□□ -1.07
GABRE-209ENST00000486255 DUSP7Q16829 419 aa8.35□□□□□ -1.07
GABRE-209ENST00000486255 SLC18B1Q6NT16 456 aa8.35□□□□□ -1.07
GABRE-209ENST00000486255 ZNF784Q8NCA9 323 aaPredicted RBP8.35□□□□□ -1.07
GABRE-209ENST00000486255 PAPD5Q8NDF8 572 aaKnown RBP8.35□□□□□ -1.07
GABRE-209ENST00000486255 CHTF18Q8WVB6 975 aa8.35□□□□□ -1.07
GABRE-209ENST00000486255 OR5P2Q8WZ92 322 aa8.35□□□□□ -1.07
GABRE-209ENST00000486255 IL12RB2Q99665 862 aa8.35□□□□□ -1.07
GABRE-209ENST00000486255 GON7Q9BXV9 100 aa8.35□□□□□ -1.07
GABRE-209ENST00000486255 OR51B5Q9H339 312 aa8.35□□□□□ -1.07
GABRE-209ENST00000486255 TDP1Q9NUW8 608 aa8.35□□□□□ -1.07
GABRE-209ENST00000486255 HAO2Q9NYQ3 351 aa8.35□□□□□ -1.07
GABRE-209ENST00000486255 TEX264Q9Y6I9 313 aa8.35□□□□□ -1.07
GABRE-209ENST00000486255 MEIS3P2A8K0S8 358 aa8.35□□□□□ -1.07
GABRE-209ENST00000486255 PIP5K1CO60331 668 aa8.35□□□□□ -1.07
GABRE-209ENST00000486255 UNGP13051 313 aaPredicted RBP8.35□□□□□ -1.07
GABRE-209ENST00000486255 MAP2K5Q13163 448 aa8.35□□□□□ -1.07
GABRE-209ENST00000486255 CRHR2Q13324 411 aa8.35□□□□□ -1.07
GABRE-209ENST00000486255 ARHGAP40Q5TG30 622 aa8.35□□□□□ -1.07
GABRE-209ENST00000486255 ZNF783Q6ZMS7 281 aa8.35□□□□□ -1.07
GABRE-209ENST00000486255 C2CD4AQ8NCU7 369 aaPredicted RBP8.35□□□□□ -1.07
GABRE-209ENST00000486255 OR8J1Q8NGP2 316 aa8.35□□□□□ -1.07
GABRE-209ENST00000486255 IL31RAQ8NI17 732 aa8.35□□□□□ -1.07
GABRE-209ENST00000486255 PPTC7Q8NI37 304 aa8.35□□□□□ -1.07
GABRE-209ENST00000486255 SH3YL1Q96HL8 342 aaPredicted RBP8.35□□□□□ -1.07
GABRE-209ENST00000486255 SNX27Q96L92 541 aa8.35□□□□□ -1.07
GABRE-209ENST00000486255 FCRL3Q96P31 734 aaPredicted RBP8.35□□□□□ -1.07
GABRE-209ENST00000486255 ST6GALNAC5Q9BVH7 336 aa8.35□□□□□ -1.07
GABRE-209ENST00000486255 ADAM19Q9H013 955 aa8.35□□□□□ -1.07
GABRE-209ENST00000486255 WDR26Q9H7D7 661 aa8.35□□□□□ -1.07
GABRE-209ENST00000486255 SRA1Q9HD15 236 aaKnown RBP8.35□□□□□ -1.07
GABRE-209ENST00000486255 ABRACLQ9P1F3 81 aa8.35□□□□□ -1.07
GABRE-209ENST00000486255 HEMK1Q9Y5R4 338 aaPredicted RBP8.35□□□□□ -1.07
GABRE-209ENST00000486255 POM121CA8CG34 1229 aa8.35□□□□□ -1.07
GABRE-209ENST00000486255 GAAP10253 952 aa8.35□□□□□ -1.07
GABRE-209ENST00000486255 BLKP51451 505 aa8.35□□□□□ -1.07
GABRE-209ENST00000486255 BDH1Q02338 343 aa8.35□□□□□ -1.07
GABRE-209ENST00000486255 KCNJ8Q15842 424 aa8.35□□□□□ -1.07
GABRE-209ENST00000486255 FAM214AQ32MH5 1076 aa8.35□□□□□ -1.07
GABRE-209ENST00000486255 NRROSQ86YC3 692 aa8.35□□□□□ -1.07
GABRE-209ENST00000486255 IL17RDQ8NFM7 739 aa8.35□□□□□ -1.07
GABRE-209ENST00000486255 KIAA1191Q96A73 305 aa8.35□□□□□ -1.07
GABRE-209ENST00000486255 CDKN2AIPNLQ96HQ2 116 aa8.35□□□□□ -1.07
GABRE-209ENST00000486255 ZBED3Q96IU2 234 aaPredicted RBP8.35□□□□□ -1.07
GABRE-209ENST00000486255 NMNAT2Q9BZQ4 307 aa8.35□□□□□ -1.07
GABRE-209ENST00000486255 HIF1ANQ9NWT6 349 aa8.35□□□□□ -1.07
GABRE-209ENST00000486255 ZNF230Q9UIE0 474 aaPredicted RBP8.35□□□□□ -1.07
GABRE-209ENST00000486255 DOCK2Q92608 1830 aa8.35□□□□□ -1.07
GABRE-209ENST00000486255 MTMR11A4FU01 709 aa8.35□□□□□ -1.07
GABRE-209ENST00000486255 C9J4A7 227 aa8.35□□□□□ -1.07
GABRE-209ENST00000486255 RAB3DO95716 219 aa8.35□□□□□ -1.07
GABRE-209ENST00000486255 NDUFV2P19404 249 aa8.35□□□□□ -1.07
GABRE-209ENST00000486255 PRSS3P35030 304 aa8.35□□□□□ -1.07
GABRE-209ENST00000486255 POU3F4P49335 361 aa8.35□□□□□ -1.07
GABRE-209ENST00000486255 SELENOVP59797 346 aa8.35□□□□□ -1.07
GABRE-209ENST00000486255 SLC22A25Q6T423 547 aa8.35□□□□□ -1.07
GABRE-209ENST00000486255 TRAPPC6BQ86SZ2 158 aa8.35□□□□□ -1.07
GABRE-209ENST00000486255 LRRTM4Q86VH4 590 aa8.35□□□□□ -1.07
GABRE-209ENST00000486255 C1orf127Q8N9H9 656 aa8.35□□□□□ -1.07
GABRE-209ENST00000486255 OR52E2Q8NGJ4 325 aa8.35□□□□□ -1.07
GABRE-209ENST00000486255 OR5H6Q8NGV6 325 aa8.35□□□□□ -1.07
GABRE-209ENST00000486255 OR5W2Q8NH69 310 aa8.35□□□□□ -1.07
GABRE-209ENST00000486255 PUM2Q8TB72 1066 aaKnown RBP eCLIP8.35□□□□□ -1.072e-7■■■□□ 19.1
GABRE-209ENST00000486255 FNDC9Q8TBE3 224 aa8.35□□□□□ -1.07
GABRE-209ENST00000486255 ATOH1Q92858 354 aaPredicted RBP8.35□□□□□ -1.07
GABRE-209ENST00000486255 GLYATL1Q969I3 302 aa8.35□□□□□ -1.07
GABRE-209ENST00000486255 TAAR8Q969N4 342 aa8.35□□□□□ -1.07
GABRE-209ENST00000486255 FOXRED1Q96CU9 486 aaPredicted RBP8.35□□□□□ -1.07
GABRE-209ENST00000486255 ZNF559Q9BR84 538 aa8.35□□□□□ -1.07
GABRE-209ENST00000486255 CFAP20Q9Y6A4 193 aaKnown RBP8.35□□□□□ -1.07
GABRE-209ENST00000486255 CACNA1SQ13698 1873 aa8.35□□□□□ -1.07
GABRE-209ENST00000486255 TUBGCP6Q96RT7 1819 aa8.34□□□□□ -1.07
GABRE-209ENST00000486255 GPR4P46093 362 aa8.34□□□□□ -1.07
GABRE-209ENST00000486255 ACY1Q03154 408 aa8.34□□□□□ -1.07
GABRE-209ENST00000486255 SHFQ7M4L6 423 aa8.34□□□□□ -1.07
GABRE-209ENST00000486255 LYSMD3Q7Z3D4 306 aa8.34□□□□□ -1.07
GABRE-209ENST00000486255 C22orf15Q8WYQ4 148 aa8.34□□□□□ -1.07
GABRE-209ENST00000486255 FAM46AQ96IP4 442 aaKnown RBP8.34□□□□□ -1.07
GABRE-209ENST00000486255 SGCZQ96LD1 299 aa8.34□□□□□ -1.07
GABRE-209ENST00000486255 CRB3Q9BUF7 120 aa8.34□□□□□ -1.07
GABRE-209ENST00000486255 SUV39H2Q9H5I1 410 aa8.34□□□□□ -1.07
GABRE-209ENST00000486255 PTGES2Q9H7Z7 377 aa8.34□□□□□ -1.07
GABRE-209ENST00000486255 POPDC3Q9HBV1 291 aa8.34□□□□□ -1.07
GABRE-209ENST00000486255 IGLV3-22A0A075B6J6 115 aa8.34□□□□□ -1.07
GABRE-209ENST00000486255 CBY3A6NI87 242 aa8.34□□□□□ -1.07
GABRE-209ENST00000486255 H0Y8G0 127 aa8.34□□□□□ -1.07
GABRE-209ENST00000486255 CFIP05156 583 aa8.34□□□□□ -1.07
GABRE-209ENST00000486255 LAG3P18627 525 aa8.34□□□□□ -1.07
GABRE-209ENST00000486255 GABRA3P34903 492 aa8.34□□□□□ -1.07
GABRE-209ENST00000486255 AGTR2P50052 363 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms