RNA–Protein interactions for RNA: ENST00000486159.5

TMEM39A-208, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 826 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-208ENST00000486159 DEFB134Q4QY38 66 aa8.73□□□□□ -1.01
TMEM39A-208ENST00000486159 PAGE2Q7Z2X7 111 aa8.73□□□□□ -1.01
TMEM39A-208ENST00000486159 FGD2Q7Z6J4 655 aa8.73□□□□□ -1.01
TMEM39A-208ENST00000486159 PNPLA5Q7Z6Z6 429 aaPredicted RBP8.73□□□□□ -1.01
TMEM39A-208ENST00000486159 CHERPQ8IWX8 916 aaKnown RBP8.73□□□□□ -1.01
TMEM39A-208ENST00000486159 METTL4Q8N3J2 472 aa8.73□□□□□ -1.01
TMEM39A-208ENST00000486159 C1orf52Q8N6N3 182 aaKnown RBP8.73□□□□□ -1.01
TMEM39A-208ENST00000486159 ANKRD53Q8N9V6 530 aa8.73□□□□□ -1.01
TMEM39A-208ENST00000486159 CAMKVQ8NCB2 501 aa8.73□□□□□ -1.01
TMEM39A-208ENST00000486159 PLPP5Q8NEB5 264 aa8.73□□□□□ -1.01
TMEM39A-208ENST00000486159 COQ8BQ96D53 544 aa8.73□□□□□ -1.01
TMEM39A-208ENST00000486159 ZNF764Q96H86 408 aaPredicted RBP8.73□□□□□ -1.01
TMEM39A-208ENST00000486159 TSSK3Q96PN8 268 aa8.73□□□□□ -1.01
TMEM39A-208ENST00000486159 BTBD9Q96Q07 612 aa8.73□□□□□ -1.01
TMEM39A-208ENST00000486159 SARGQ9BW04 601 aa8.73□□□□□ -1.01
TMEM39A-208ENST00000486159 BHLHE41Q9C0J9 482 aaPredicted RBP8.73□□□□□ -1.01
TMEM39A-208ENST00000486159 RNF32Q9H0A6 362 aa8.73□□□□□ -1.01
TMEM39A-208ENST00000486159 PCDHAC1Q9H158 963 aa8.73□□□□□ -1.01
TMEM39A-208ENST00000486159 Q9H521 79 aa8.73□□□□□ -1.01
TMEM39A-208ENST00000486159 YY1AP1Q9H869 796 aa8.73□□□□□ -1.01
TMEM39A-208ENST00000486159 GORASP2Q9H8Y8 452 aa8.73□□□□□ -1.01
TMEM39A-208ENST00000486159 ANKHQ9HCJ1 492 aa8.73□□□□□ -1.01
TMEM39A-208ENST00000486159 MYNNQ9NPC7 610 aa8.73□□□□□ -1.01
TMEM39A-208ENST00000486159 NIPSNAP3AQ9UFN0 247 aaPredicted RBP8.73□□□□□ -1.01
TMEM39A-208ENST00000486159 ATP6V1HQ9UI12 483 aa8.73□□□□□ -1.01
TMEM39A-208ENST00000486159 MCM8Q9UJA3 840 aa8.73□□□□□ -1.01
TMEM39A-208ENST00000486159 NPIPA1Q9UND3 350 aa8.73□□□□□ -1.01
TMEM39A-208ENST00000486159 TRBC2A0A5B9 178 aa8.72□□□□□ -1.01
TMEM39A-208ENST00000486159 DHRS12A0PJE2 317 aa8.72□□□□□ -1.01
TMEM39A-208ENST00000486159 GABRR3A8MPY1 467 aa8.72□□□□□ -1.01
TMEM39A-208ENST00000486159 EVPLLA8MZ36 301 aa8.72□□□□□ -1.01
TMEM39A-208ENST00000486159 FAM220BPB1ANY3 271 aa8.72□□□□□ -1.01
TMEM39A-208ENST00000486159 TGFBR3LH3BV60 316 aa8.72□□□□□ -1.01
TMEM39A-208ENST00000486159 RNASET2O00584 256 aaKnown RBP8.72□□□□□ -1.01
TMEM39A-208ENST00000486159 RFXANKO14593 260 aa8.72□□□□□ -1.01
TMEM39A-208ENST00000486159 SCAMP2O15127 329 aaKnown RBP8.72□□□□□ -1.01
TMEM39A-208ENST00000486159 ARPC2O15144 300 aa8.72□□□□□ -1.01
TMEM39A-208ENST00000486159 NDUFS4O43181 175 aa8.72□□□□□ -1.01
TMEM39A-208ENST00000486159 PCDH7O60245 1069 aa8.72□□□□□ -1.01
TMEM39A-208ENST00000486159 GALR3O60755 368 aaPredicted RBP8.72□□□□□ -1.01
TMEM39A-208ENST00000486159 TBX19O60806 448 aa8.72□□□□□ -1.01
TMEM39A-208ENST00000486159 CLEC3AO75596 197 aa8.72□□□□□ -1.01
TMEM39A-208ENST00000486159 NEURL1O76050 574 aa8.72□□□□□ -1.01
TMEM39A-208ENST00000486159 BMP2P12643 396 aa8.72□□□□□ -1.01
TMEM39A-208ENST00000486159 ICAM2P13598 275 aa8.72□□□□□ -1.01
TMEM39A-208ENST00000486159 MAOAP21397 527 aa8.72□□□□□ -1.01
TMEM39A-208ENST00000486159 TACR1P25103 407 aa8.72□□□□□ -1.01
TMEM39A-208ENST00000486159 TPP2P29144 1249 aaPredicted RBP8.72□□□□□ -1.01
TMEM39A-208ENST00000486159 RFC3P40938 356 aa8.72□□□□□ -1.01
TMEM39A-208ENST00000486159 OR4D2P58180 307 aa8.72□□□□□ -1.01
TMEM39A-208ENST00000486159 KRTAP10-9P60411 292 aa8.72□□□□□ -1.01
TMEM39A-208ENST00000486159 TRA2BP62995 288 aaKnown RBP8.72□□□□□ -1.01
TMEM39A-208ENST00000486159 TRIP10Q15642 601 aa8.72□□□□□ -1.01
TMEM39A-208ENST00000486159 PGS1Q32NB8 556 aa8.72□□□□□ -1.01
TMEM39A-208ENST00000486159 TMEM35AQ53FP2 167 aa8.72□□□□□ -1.01
TMEM39A-208ENST00000486159 RABL3Q5HYI8 236 aa8.72□□□□□ -1.01
TMEM39A-208ENST00000486159 CPTPQ5TA50 214 aa8.72□□□□□ -1.01
TMEM39A-208ENST00000486159 DEPDC1Q5TB30 811 aa8.72□□□□□ -1.01
TMEM39A-208ENST00000486159 ERICH5Q6P6B1 374 aa8.72□□□□□ -1.01
TMEM39A-208ENST00000486159 C16orf47Q6ZP98 133 aaPredicted RBP8.72□□□□□ -1.01
TMEM39A-208ENST00000486159 GALNTL5Q7Z4T8 443 aa8.72□□□□□ -1.01
TMEM39A-208ENST00000486159 ZNF295-AS1Q8N0V1 137 aa8.72□□□□□ -1.01
TMEM39A-208ENST00000486159 KRTCAP2Q8N6L1 136 aa8.72□□□□□ -1.01
TMEM39A-208ENST00000486159 FAM156AQ8NDB6 213 aa8.72□□□□□ -1.01
TMEM39A-208ENST00000486159 PAPD5Q8NDF8 572 aaKnown RBP8.72□□□□□ -1.01
TMEM39A-208ENST00000486159 TMEM52Q8NDY8 209 aa8.72□□□□□ -1.01
TMEM39A-208ENST00000486159 OR2T12Q8NG77 320 aa8.72□□□□□ -1.01
TMEM39A-208ENST00000486159 UTP15Q8TED0 518 aaKnown RBP8.72□□□□□ -1.01
TMEM39A-208ENST00000486159 SCMH1Q96GD3 660 aa8.72□□□□□ -1.01
TMEM39A-208ENST00000486159 ZNF354BQ96LW1 612 aa8.72□□□□□ -1.01
TMEM39A-208ENST00000486159 NSMCE2Q96MF7 247 aa8.72□□□□□ -1.01
TMEM39A-208ENST00000486159 THUMPD3Q9BV44 507 aaKnown RBP8.72□□□□□ -1.01
TMEM39A-208ENST00000486159 PAIP1Q9H074 479 aaKnown RBP8.72□□□□□ -1.01
TMEM39A-208ENST00000486159 REEP4Q9H6H4 257 aa8.72□□□□□ -1.01
TMEM39A-208ENST00000486159 LIN28AQ9H9Z2 209 aaKnown RBP8.72□□□□□ -1.01
TMEM39A-208ENST00000486159 PRM3Q9NNZ6 103 aa8.72□□□□□ -1.01
TMEM39A-208ENST00000486159 MMP25Q9NPA2 562 aa8.72□□□□□ -1.01
TMEM39A-208ENST00000486159 SERHLQ9NQF3 203 aa8.72□□□□□ -1.01
TMEM39A-208ENST00000486159 NECTIN3Q9NQS3 549 aa8.72□□□□□ -1.01
TMEM39A-208ENST00000486159 RIMS3Q9UJD0 308 aa8.72□□□□□ -1.01
TMEM39A-208ENST00000486159 PACSIN3Q9UKS6 424 aa8.72□□□□□ -1.01
TMEM39A-208ENST00000486159 HRH3Q9Y5N1 445 aa8.72□□□□□ -1.01
TMEM39A-208ENST00000486159 NCOA6Q14686 2063 aaPredicted RBP8.71□□□□□ -1.01
TMEM39A-208ENST00000486159 GNG14A0A1W2PPG7 69 aa8.71□□□□□ -1.02
TMEM39A-208ENST00000486159 GSTA4O15217 222 aa8.71□□□□□ -1.02
TMEM39A-208ENST00000486159 PRKNO60260 465 aaPredicted RBP8.71□□□□□ -1.02
TMEM39A-208ENST00000486159 SLC19A2O60779 497 aa8.71□□□□□ -1.02
TMEM39A-208ENST00000486159 CRYABP02511 175 aaKnown RBP8.71□□□□□ -1.02
TMEM39A-208ENST00000486159 FHP07954 510 aa8.71□□□□□ -1.02
TMEM39A-208ENST00000486159 ABCB1P08183 1280 aaPredicted RBP8.71□□□□□ -1.02
TMEM39A-208ENST00000486159 SMIM10L1P0DMW3 83 aa8.71□□□□□ -1.02
TMEM39A-208ENST00000486159 HOXB9P17482 250 aaPredicted RBP8.71□□□□□ -1.02
TMEM39A-208ENST00000486159 ALOX12P18054 663 aa8.71□□□□□ -1.02
TMEM39A-208ENST00000486159 GGT1P19440 569 aa8.71□□□□□ -1.02
TMEM39A-208ENST00000486159 ATP6V1B2P21281 511 aa8.71□□□□□ -1.02
TMEM39A-208ENST00000486159 PPP2R1BP30154 601 aa8.71□□□□□ -1.02
TMEM39A-208ENST00000486159 MSX2P35548 267 aaPredicted RBP8.71□□□□□ -1.02
TMEM39A-208ENST00000486159 AHRP35869 848 aa8.71□□□□□ -1.02
TMEM39A-208ENST00000486159 RAE1P78406 368 aaKnown RBP8.71□□□□□ -1.02
TMEM39A-208ENST00000486159 OC90Q02509 493 aaPredicted RBP8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms